Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX400061: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-221481' containing sample 'Cryptococcus neoformans var. grubii MMRL1368'
1 ILLUMINA (Illumina HiSeq 2000) run: 28M spots, 5.7G bases, 2.5Gb downloads

UUID: 1d1be55a-0f86-4788-af18-4da238b69814

Design: Illumina sequencing of Cryptococcus neoformans var. grubii MMRL1368 via random selection

Submitted by: Broad Institute (BI)

Study: Cryptococcus

PRJNA227915 • SRP034805 • All experiments • All runs

Sample: Generic sample from Cryptococcus neoformans var. grubii MMRL1368

SAMN02412456 • SRS520175 • All experiments • All runs

Organism: Cryptococcus neoformans var. grubii MMRL1368

Library:

Name: Pond-221481

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 289881.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:3VMSK

material_type: DNA:DNA Somatic

product_order: PDO-296

product_part_number: P-WG-0004

project: G30185

research_project: RP-194

root_sample_id: SM-3GXSC

sample_id: SM-3VMSK

work_request: 35115

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-03-02 13:23:59.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 28M spots, 5.7G bases, 2.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR1063259	27,980,827	5.7G	2.5Gb	2013-12-28

ID:: 574504

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity