Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555914: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318432' containing sample 'VET0432R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.9M spots, 795.2M bases, 364Mb downloads

UUID: 425af1f2-3fc9-4a6d-8770-41cc836cba1b

Design: Illumina sequencing of Staphylococcus aureus VET0432R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228747 • SRP042586 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0432R

SAMN02404237 • SRS622996 • All experiments • All runs

Organism: Staphylococcus aureus VET0432R

Library:

Name: Pond-318432

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470161.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8WJ

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55176

research_project: RP-513

root_sample_id: SM-4PMW3

sample_id: SM-5C8WJ

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.9M spots, 795.2M bases, 364Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303634	1,963,932	396.7M	181.8Mb	2014-05-30
SRR1303639	1,972,733	398.5M	182.2Mb	2014-05-30

ID:: 794942

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity