Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555761: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319956' containing sample 'VET0414R'
1 ILLUMINA (Illumina HiSeq 2000) run: 7.9M spots, 1.6G bases, 745.5Mb downloads

UUID: 503c0052-8472-4879-970f-c007177bf4a4

Design: Illumina sequencing of Staphylococcus aureus VET0414R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228734 • SRP042489 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0414R

SAMN02404224 • SRS622844 • All experiments • All runs

Organism: Staphylococcus aureus VET0414R

Library:

Name: Pond-319956

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 473546.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CVK5

material_type: DNA:DNA Somatic

product_order: PDO-2556

product_part_number: P-WG-0004

project: G54977

research_project: RP-513

root_sample_id: SM-4PMVP

sample_id: SM-5CVK5

work_request: 39345

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 7.9M spots, 1.6G bases, 745.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303422	7,929,442	1.6G	745.5Mb	2014-05-30

ID:: 794789

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity