Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX566071: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318744' containing sample 'VET0197R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 14.5M spots, 2.9G bases, 1.4Gb downloads

UUID: c85cf96f-88d3-461d-8a04-1181f74fc608

Design: Illumina sequencing of Staphylococcus aureus VET0197R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228588 • SRP042687 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0197R

SAMN02404080 • SRS626327 • All experiments • All runs

Organism: Staphylococcus aureus VET0197R

Library:

Name: Pond-318744

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471505.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLFD

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55313

research_project: RP-513

root_sample_id: SM-4Q5NP

sample_id: SM-5CLFD

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 14.5M spots, 2.9G bases, 1.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR1326953	3,585,484	724.3M	351.8Mb	2014-06-03
SRR1326966	3,613,345	729.9M	355.5Mb	2014-06-03
SRR1340410	3,611,760	729.6M	357.6Mb	2014-06-05
SRR1344691	3,644,717	736.2M	357Mb	2014-06-06

ID:: 808888

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Sequence Read Archive

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