Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567862: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318317' containing sample 'VET0141R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.9M spots, 1.2G bases, 588.3Mb downloads

UUID: d6b0d0f6-2a91-4204-9834-4b96f2a1dab7

Design: Illumina sequencing of Staphylococcus aureus VET0141R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228552 • SRP042907 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0141R

SAMN02404044 • SRS627016 • All experiments • All runs

Organism: Staphylococcus aureus VET0141R

Library:

Name: Pond-318317

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 469950.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8PE

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55083

research_project: RP-513

root_sample_id: SM-4P93U

sample_id: SM-5C8PE

work_request: 39365

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-09 14:32:02.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.9M spots, 1.2G bases, 588.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1330233	2,906,335	587.1M	288.5Mb	2014-06-03
SRR1330425	2,993,394	604.7M	299.8Mb	2014-06-04

ID:: 810679

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