Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX507399: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311298' containing sample 'USA_11'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.6M spots, 535M bases, 252.9Mb downloads

UUID: c25d2912-43cf-494f-a2e0-a407b8c24378

Design: Illumina sequencing of Staphylococcus aureus USA_11 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus USA_11

SAMN02391434 • SRS586345 • All experiments • All runs

Organism: Staphylococcus aureus USA_11

Library:

Name: Pond-311298

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445711.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571UZ

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51766

research_project: RP-513

root_sample_id: SM-4PALM

sample_id: SM-571UZ

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.6M spots, 535M bases, 252.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1213186	2,648,313	535M	252.9Mb	2014-04-02

ID:: 706703

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