Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555753: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311224' containing sample '2009-60-561-1'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.1M spots, 628.7M bases, 307.6Mb downloads

UUID: 320a6f95-4412-42a9-9fad-dd91c3c0f9b6

Design: Illumina sequencing of Staphylococcus aureus 2009-60-561-1 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226474 • SRP042481 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus 2009-60-561-1

SAMN02391346 • SRS622836 • All experiments • All runs

Organism: Staphylococcus aureus 2009-60-561-1

Library:

Name: Pond-311224

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445637.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571SV

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51693

research_project: RP-513

root_sample_id: SM-4PAJ2

sample_id: SM-571SV

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.1M spots, 628.7M bases, 307.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303413	3,112,584	628.7M	307.6Mb	2014-05-30

ID:: 794781

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity