Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX546099: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316201' containing sample '12S01399'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.8M spots, 570M bases, 259.2Mb downloads

UUID: b7d3b6b8-9c69-4792-98d5-e271a7067a6e

Design: Illumina sequencing of Staphylococcus aureus 12S01399 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus 12S01399

SAMN02391196 • SRS613165 • All experiments • All runs

Organism: Staphylococcus aureus 12S01399

Library:

Name: Pond-316201

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 464932.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BIXL

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51889

research_project: RP-513

root_sample_id: SM-4Q86A

sample_id: SM-5BIXL

work_request: 39113

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.8M spots, 570M bases, 259.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1290875	2,821,772	570M	259.2Mb	2014-05-17

ID:: 781319

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