Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX363612: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277995' containing sample 'Staphylococcus aureus M0888'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.2M spots, 637.2M bases, 282.8Mb downloads

UUID: b739c37a-438a-410a-ad5c-936a8efd0799

Design: Illumina sequencing of Staphylococcus aureus M0888 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216835 • SRP030887 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0888

SAMN02325786 • SRS490242 • All experiments • All runs

Organism: Staphylococcus aureus M0888

Library:

Name: Pond-277995

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394141.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T89G

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46088

research_project: RP-433

root_sample_id: SM-4C9LR

sample_id: SM-4T89G

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.2M spots, 637.2M bases, 282.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010697	1,558,348	314.8M	139.9Mb	2013-10-09
SRR1010698	1,595,892	322.4M	142.9Mb	2013-10-09

ID:: 516049

SRA

Sequence Read Archive

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