SNP Links for Protein (Select 98986461) - SNP

Links from Protein

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Select item 14895698151.

rs1489569815 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:39605522 (GRCh38)
17:37761775 (GRCh37)
Canonical SPDI:: NC_000017.11:39605521:A:G
Gene:: NEUROD2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.39605522A>G, NC_000017.10:g.37761775A>G, NM_006160.4:c.1078T>C, NM_006160.3:c.1078T>C, NP_006151.3:p.Ser360Pro

Select item 14874815182.

rs1487481518 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:39606155 (GRCh38)
17:37762408 (GRCh37)
Canonical SPDI:: NC_000017.11:39606154:G:A
Gene:: NEUROD2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000017.11:g.39606155G>A, NC_000017.10:g.37762408G>A, NM_006160.4:c.445C>T, NM_006160.3:c.445C>T, NP_006151.3:p.Pro149Ser

Select item 14866777023.

rs1486677702 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:39605786 (GRCh38)
17:37762039 (GRCh37)
Canonical SPDI:: NC_000017.11:39605785:C:A
Gene:: NEUROD2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000017.11:g.39605786C>A, NC_000017.10:g.37762039C>A, NM_006160.4:c.814G>T, NM_006160.3:c.814G>T, NP_006151.3:p.Ala272Ser

Select item 14850780514.

rs1485078051 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:39606443 (GRCh38)
17:37762696 (GRCh37)
Canonical SPDI:: NC_000017.11:39606442:G:A
Gene:: NEUROD2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000017.11:g.39606443G>A, NC_000017.10:g.37762696G>A, NM_006160.4:c.157C>T, NM_006160.3:c.157C>T, NP_006151.3:p.Arg53Trp

Select item 14843097395.

rs1484309739 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 17:39606585 (GRCh38)
17:37762838 (GRCh37)
Canonical SPDI:: NC_000017.11:39606584:C:A,NC_000017.11:39606584:C:G
Gene:: NEUROD2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000017.11:g.39606585C>A, NC_000017.11:g.39606585C>G, NC_000017.10:g.37762838C>A, NC_000017.10:g.37762838C>G, NM_006160.4:c.15G>T, NM_006160.4:c.15G>C, NM_006160.3:c.15G>T, NM_006160.3:c.15G>C

Select item 14834065366.

rs1483406536 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 17:39606498 (GRCh38)
17:37762751 (GRCh37)
Canonical SPDI:: NC_000017.11:39606497:G:A,NC_000017.11:39606497:G:T
Gene:: NEUROD2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000044/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.39606498G>A, NC_000017.11:g.39606498G>T, NC_000017.10:g.37762751G>A, NC_000017.10:g.37762751G>T, NM_006160.4:c.102C>T, NM_006160.4:c.102C>A, NM_006160.3:c.102C>T, NM_006160.3:c.102C>A

Select item 14823642557.

rs1482364255 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 17:39605880 (GRCh38)
17:37762133 (GRCh37)
Canonical SPDI:: NC_000017.11:39605879:C:A,NC_000017.11:39605879:C:T
Gene:: NEUROD2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.39605880C>A, NC_000017.11:g.39605880C>T, NC_000017.10:g.37762133C>A, NC_000017.10:g.37762133C>T, NM_006160.4:c.720G>T, NM_006160.4:c.720G>A, NM_006160.3:c.720G>T, NM_006160.3:c.720G>A

Select item 14822028268.

rs1482202826 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:39605688 (GRCh38)
17:37761941 (GRCh37)
Canonical SPDI:: NC_000017.11:39605687:A:G
Gene:: NEUROD2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (GnomAD_exomes)
G=0.000009/1 (ExAC)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.39605688A>G, NC_000017.10:g.37761941A>G, NM_006160.4:c.912T>C, NM_006160.3:c.912T>C

Select item 14821525299.

rs1482152529 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 17:39606137 (GRCh38)
17:37762390 (GRCh37)
Canonical SPDI:: NC_000017.11:39606136:G:C
Gene:: NEUROD2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.39606137G>C, NC_000017.10:g.37762390G>C, NM_006160.4:c.463C>G, NM_006160.3:c.463C>G, NP_006151.3:p.Gln155Glu

Select item 147893615310.

rs1478936153 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 17:39605951 (GRCh38)
17:37762204 (GRCh37)
Canonical SPDI:: NC_000017.11:39605950:T:A,NC_000017.11:39605950:T:C
Gene:: NEUROD2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000031/1 (ALFA)
A=0./0 (GnomAD)
C=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000017.11:g.39605951T>A, NC_000017.11:g.39605951T>C, NC_000017.10:g.37762204T>A, NC_000017.10:g.37762204T>C, NM_006160.4:c.649A>T, NM_006160.4:c.649A>G, NM_006160.3:c.649A>T, NM_006160.3:c.649A>G, NP_006151.3:p.Thr217Ser, NP_006151.3:p.Thr217Ala

Select item 147620221111.

rs1476202211 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:39605459 (GRCh38)
17:37761712 (GRCh37)
Canonical SPDI:: NC_000017.11:39605458:G:A
Gene:: NEUROD2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000017.11:g.39605459G>A, NC_000017.10:g.37761712G>A, NM_006160.4:c.1141C>T, NM_006160.3:c.1141C>T, NP_006151.3:p.His381Tyr

Select item 147299450412.

rs1472994504 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:39606456 (GRCh38)
17:37762709 (GRCh37)
Canonical SPDI:: NC_000017.11:39606455:A:G
Gene:: NEUROD2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.39606456A>G, NC_000017.10:g.37762709A>G, NM_006160.4:c.144T>C, NM_006160.3:c.144T>C

Select item 147294234013.

rs1472942340 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:39606283 (GRCh38)
17:37762536 (GRCh37)
Canonical SPDI:: NC_000017.11:39606282:G:A
Gene:: NEUROD2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000017.11:g.39606283G>A, NC_000017.10:g.37762536G>A, NM_006160.4:c.317C>T, NM_006160.3:c.317C>T, NP_006151.3:p.Pro106Leu

Select item 147259467614.

rs1472594676 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:39605886 (GRCh38)
17:37762139 (GRCh37)
Canonical SPDI:: NC_000017.11:39605885:G:T
Gene:: NEUROD2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.39605886G>T, NC_000017.10:g.37762139G>T, NM_006160.4:c.714C>A, NM_006160.3:c.714C>A

Select item 147200954415.

rs1472009544 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 17:39606164 (GRCh38)
17:37762417 (GRCh37)
Canonical SPDI:: NC_000017.11:39606163:T:G
Gene:: NEUROD2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.39606164T>G, NC_000017.10:g.37762417T>G, NM_006160.4:c.436A>C, NM_006160.3:c.436A>C, NP_006151.3:p.Lys146Gln

Select item 147055029016.

rs1470550290 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:39606575 (GRCh38)
17:37762828 (GRCh37)
Canonical SPDI:: NC_000017.11:39606574:G:T
Gene:: NEUROD2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000023/6 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000017.11:g.39606575G>T, NC_000017.10:g.37762828G>T, NM_006160.4:c.25C>A, NM_006160.3:c.25C>A, NP_006151.3:p.Pro9Thr

Select item 147053473017.

rs1470534730 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:39605611 (GRCh38)
17:37761864 (GRCh37)
Canonical SPDI:: NC_000017.11:39605610:G:A
Gene:: NEUROD2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000017.11:g.39605611G>A, NC_000017.10:g.37761864G>A, NM_006160.4:c.989C>T, NM_006160.3:c.989C>T, NP_006151.3:p.Ser330Leu

Select item 146599991218.

rs1465999912 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 17:39606393 (GRCh38)
17:37762646 (GRCh37)
Canonical SPDI:: NC_000017.11:39606392:C:G
Gene:: NEUROD2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.39606393C>G, NC_000017.10:g.37762646C>G, NM_006160.4:c.207G>C, NM_006160.3:c.207G>C

Select item 146530121519.

rs1465301215 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 17:39605507 (GRCh38)
17:37761760 (GRCh37)
Canonical SPDI:: NC_000017.11:39605506:G:C
Gene:: NEUROD2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.39605507G>C, NC_000017.10:g.37761760G>C, NM_006160.4:c.1093C>G, NM_006160.3:c.1093C>G, NP_006151.3:p.Leu365Val

Select item 146323985720.

rs1463239857 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:39605620 (GRCh38)
17:37761873 (GRCh37)
Canonical SPDI:: NC_000017.11:39605619:A:G
Gene:: NEUROD2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.39605620A>G, NC_000017.10:g.37761873A>G, NM_006160.4:c.980T>C, NM_006160.3:c.980T>C, NP_006151.3:p.Met327Thr

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