SNP Links for Protein (Select 768038900) - SNP

Links from Protein

Items: 1 to 20 of 150

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Select item 14846123751.

rs1484612375 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:120109245 (GRCh38)
X:119243203 (GRCh37)
Canonical SPDI:: NC_000023.11:120109244:C:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.120109245C>T, NW_004070886.1:g.161675C>T, NC_000023.10:g.119243203C>T, XM_011531281.3:c.586G>A, XM_011531281.2:c.586G>A, XM_011531281.1:c.586G>A, NM_139282.3:c.502G>A, NM_139282.2:c.502G>A, XP_011529583.1:p.Ala196Thr, NP_644811.1:p.Ala168Thr

Select item 14718451312.

rs1471845131 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:120115885 (GRCh38)
X:119249795 (GRCh37)
Canonical SPDI:: NC_000023.11:120115884:A:G
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000023.11:g.120115885A>G, NW_004070886.1:g.168315A>G, NC_000023.10:g.119249795A>G, XM_011531281.3:c.62T>C, XM_011531281.2:c.62T>C, XM_011531281.1:c.62T>C, NM_139282.3:c.-23T>C, NM_139282.2:c.-23T>C, XP_011529583.1:p.Val21Ala

Select item 14553972373.

rs1455397237 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: X:120115875 (GRCh38)
X:119249785 (GRCh37)
Canonical SPDI:: NC_000023.11:120115874:G:C,NC_000023.11:120115874:G:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
C=0.000045/1 (TOMMO)
HGVS:: NC_000023.11:g.120115875G>C, NC_000023.11:g.120115875G>T, NW_004070886.1:g.168305G>C, NW_004070886.1:g.168305G>T, NC_000023.10:g.119249785G>C, NC_000023.10:g.119249785G>T, XM_011531281.3:c.72C>G, XM_011531281.3:c.72C>A, XM_011531281.2:c.72C>G, XM_011531281.2:c.72C>A, XM_011531281.1:c.72C>G, XM_011531281.1:c.72C>A, NM_139282.3:c.-13C>G, NM_139282.3:c.-13C>A, NM_139282.2:c.-13C>G, NM_139282.2:c.-13C>A

Select item 14547586594.

rs1454758659 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:120115652 (GRCh38)
X:119249562 (GRCh37)
Canonical SPDI:: NC_000023.11:120115651:C:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000006/1 (GnomAD_exomes)
T=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.120115652C>T, NW_004070886.1:g.168082C>T, NC_000023.10:g.119249562C>T, XM_011531281.3:c.295G>A, XM_011531281.2:c.295G>A, XM_011531281.1:c.295G>A, NM_139282.3:c.211G>A, NM_139282.2:c.211G>A, XP_011529583.1:p.Gly99Ser, NP_644811.1:p.Gly71Ser

Select item 14491250545.

rs1449125054 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:120115637 (GRCh38)
X:119249547 (GRCh37)
Canonical SPDI:: NC_000023.11:120115636:C:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.120115637C>T, NW_004070886.1:g.168067C>T, NC_000023.10:g.119249547C>T, XM_011531281.3:c.310G>A, XM_011531281.2:c.310G>A, XM_011531281.1:c.310G>A, NM_139282.3:c.226G>A, NM_139282.2:c.226G>A, XP_011529583.1:p.Glu104Lys, NP_644811.1:p.Glu76Lys

Select item 14457592186.

rs1445759218 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: X:120109227 (GRCh38)
X:119243185 (GRCh37)
Canonical SPDI:: NC_000023.11:120109226:C:A,NC_000023.11:120109226:C:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
T=0.000045/1 (TOMMO)
HGVS:: NC_000023.11:g.120109227C>A, NC_000023.11:g.120109227C>T, NW_004070886.1:g.161657C>A, NW_004070886.1:g.161657C>T, NC_000023.10:g.119243185C>A, NC_000023.10:g.119243185C>T, XM_011531281.3:c.604G>T, XM_011531281.3:c.604G>A, XM_011531281.2:c.604G>T, XM_011531281.2:c.604G>A, XM_011531281.1:c.604G>T, XM_011531281.1:c.604G>A, NM_139282.3:c.520G>T, NM_139282.3:c.520G>A, NM_139282.2:c.520G>T, NM_139282.2:c.520G>A, XP_011529583.1:p.Asp202Tyr, XP_011529583.1:p.Asp202Asn, NP_644811.1:p.Asp174Tyr, NP_644811.1:p.Asp174Asn

Select item 14409279467.

rs1440927946 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:120115620 (GRCh38)
X:119249530 (GRCh37)
Canonical SPDI:: NC_000023.11:120115619:C:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.120115620C>T, NW_004070886.1:g.168050C>T, NC_000023.10:g.119249530C>T, XM_011531281.3:c.327G>A, XM_011531281.2:c.327G>A, XM_011531281.1:c.327G>A, NM_139282.3:c.243G>A, NM_139282.2:c.243G>A

Select item 14354684188.

rs1435468418 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:120115766 (GRCh38)
X:119249676 (GRCh37)
Canonical SPDI:: NC_000023.11:120115765:C:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.00003/8 (TOPMED)
HGVS:: NC_000023.11:g.120115766C>T, NW_004070886.1:g.168196C>T, NC_000023.10:g.119249676C>T, XM_011531281.3:c.181G>A, XM_011531281.2:c.181G>A, XM_011531281.1:c.181G>A, NM_139282.3:c.97G>A, NM_139282.2:c.97G>A, XP_011529583.1:p.Ala61Thr, NP_644811.1:p.Ala33Thr

Select item 14265870239.

rs1426587023 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:120112897 (GRCh38)
X:119246807 (GRCh37)
Canonical SPDI:: NC_000023.11:120112896:T:G
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000048/5 (GnomAD)
HGVS:: NC_000023.11:g.120112897T>G, NW_004070886.1:g.165327T>G, NC_000023.10:g.119246807T>G, XM_011531281.3:c.500A>C, XM_011531281.2:c.500A>C, XM_011531281.1:c.500A>C, NM_139282.3:c.416A>C, NM_139282.2:c.416A>C, XP_011529583.1:p.Asn167Thr, NP_644811.1:p.Asn139Thr

Select item 141698864010.

rs1416988640 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:120115568 (GRCh38)
X:119249478 (GRCh37)
Canonical SPDI:: NC_000023.11:120115567:C:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.120115568C>T, NW_004070886.1:g.167998C>T, NC_000023.10:g.119249478C>T, XM_011531281.3:c.379G>A, XM_011531281.2:c.379G>A, XM_011531281.1:c.379G>A, NM_139282.3:c.295G>A, NM_139282.2:c.295G>A, XP_011529583.1:p.Glu127Lys, NP_644811.1:p.Glu99Lys

Select item 140780767411.

rs1407807674 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: X:120115850 (GRCh38)
X:119249760 (GRCh37)
Canonical SPDI:: NC_000023.11:120115849:G:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.120115850G>T, NW_004070886.1:g.168280G>T, NC_000023.10:g.119249760G>T, XM_011531281.3:c.97C>A, XM_011531281.2:c.97C>A, XM_011531281.1:c.97C>A, NM_139282.3:c.13C>A, NM_139282.2:c.13C>A, XP_011529583.1:p.Leu33Ile, NP_644811.1:p.Leu5Ile

Select item 138577974712.

rs1385779747 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:120115540 (GRCh38)
X:119249450 (GRCh37)
Canonical SPDI:: NC_000023.11:120115539:G:A
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.120115540G>A, NW_004070886.1:g.167970G>A, NC_000023.10:g.119249450G>A, XM_011531281.3:c.407C>T, XM_011531281.2:c.407C>T, XM_011531281.1:c.407C>T, NM_139282.3:c.323C>T, NM_139282.2:c.323C>T, XP_011529583.1:p.Thr136Met, NP_644811.1:p.Thr108Met

Select item 138504822013.

rs1385048220 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: X:120109231 (GRCh38)
X:119243189 (GRCh37)
Canonical SPDI:: NC_000023.11:120109230:A:T
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: intron_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.120109231A>T, NW_004070886.1:g.161661A>T, NC_000023.10:g.119243189A>T, XM_011531281.3:c.600T>A, XM_011531281.2:c.600T>A, XM_011531281.1:c.600T>A, NM_139282.3:c.516T>A, NM_139282.2:c.516T>A

Select item 137716215914.

rs1377162159 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: X:120115767 (GRCh38)
X:119249677 (GRCh37)
Canonical SPDI:: NC_000023.11:120115766:G:A,NC_000023.11:120115766:G:C
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,synonymous_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000006/1 (GnomAD_exomes)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.120115767G>A, NC_000023.11:g.120115767G>C, NW_004070886.1:g.168197G>A, NW_004070886.1:g.168197G>C, NC_000023.10:g.119249677G>A, NC_000023.10:g.119249677G>C, XM_011531281.3:c.180C>T, XM_011531281.3:c.180C>G, XM_011531281.2:c.180C>T, XM_011531281.2:c.180C>G, XM_011531281.1:c.180C>T, XM_011531281.1:c.180C>G, NM_139282.3:c.96C>T, NM_139282.3:c.96C>G, NM_139282.2:c.96C>T, NM_139282.2:c.96C>G, XP_011529583.1:p.Ser60Arg, NP_644811.1:p.Ser32Arg

Select item 136252585815.

rs1362525858 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: X:120115618 (GRCh38)
X:119249528 (GRCh37)
Canonical SPDI:: NC_000023.11:120115617:T:C,NC_000023.11:120115617:T:G
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.120115618T>C, NC_000023.11:g.120115618T>G, NW_004070886.1:g.168048T>C, NW_004070886.1:g.168048T>G, NC_000023.10:g.119249528T>C, NC_000023.10:g.119249528T>G, XM_011531281.3:c.329A>G, XM_011531281.3:c.329A>C, XM_011531281.2:c.329A>G, XM_011531281.2:c.329A>C, XM_011531281.1:c.329A>G, XM_011531281.1:c.329A>C, NM_139282.3:c.245A>G, NM_139282.3:c.245A>C, NM_139282.2:c.245A>G, NM_139282.2:c.245A>C, XP_011529583.1:p.Gln110Arg, XP_011529583.1:p.Gln110Pro, NP_644811.1:p.Gln82Arg, NP_644811.1:p.Gln82Pro

Select item 135072412816.

rs1350724128 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: X:120115902 (GRCh38)
X:119249812 (GRCh37)
Canonical SPDI:: NC_000023.11:120115901:T:C,NC_000023.11:120115901:T:G
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,5_prime_UTR_variant,synonymous_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000044/1 (ALFA)
C=0.000008/1 (GnomAD_exomes)
G=0.000015/4 (TOPMED)
HGVS:: NC_000023.11:g.120115902T>C, NC_000023.11:g.120115902T>G, NW_004070886.1:g.168332T>C, NW_004070886.1:g.168332T>G, NC_000023.10:g.119249812T>C, NC_000023.10:g.119249812T>G, XM_011531281.3:c.45A>G, XM_011531281.3:c.45A>C, XM_011531281.2:c.45A>G, XM_011531281.2:c.45A>C, XM_011531281.1:c.45A>G, XM_011531281.1:c.45A>C, NM_139282.3:c.-40A>G, NM_139282.3:c.-40A>C, NM_139282.2:c.-40A>G, NM_139282.2:c.-40A>C

Select item 133964752617.

rs1339647526 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:120115678 (GRCh38)
X:119249588 (GRCh37)
Canonical SPDI:: NC_000023.11:120115677:C:G
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00001/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.120115678C>G, NW_004070886.1:g.168108C>G, NC_000023.10:g.119249588C>G, XM_011531281.3:c.269G>C, XM_011531281.2:c.269G>C, XM_011531281.1:c.269G>C, NM_139282.3:c.185G>C, NM_139282.2:c.185G>C, XP_011529583.1:p.Arg90Pro, NP_644811.1:p.Arg62Pro

Select item 133604282218.

rs1336042822 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:120115496 (GRCh38)
X:119249406 (GRCh37)
Canonical SPDI:: NC_000023.11:120115495:G:C
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.120115496G>C, NW_004070886.1:g.167926G>C, NC_000023.10:g.119249406G>C, XM_011531281.3:c.451C>G, XM_011531281.2:c.451C>G, XM_011531281.1:c.451C>G, NM_139282.3:c.367C>G, NM_139282.2:c.367C>G, XP_011529583.1:p.Arg151Gly, NP_644811.1:p.Arg123Gly

Select item 133441766019.

rs1334417660 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:120109204 (GRCh38)
X:119243162 (GRCh37)
Canonical SPDI:: NC_000023.11:120109203:G:A
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000006/1 (GnomAD_exomes)
A=0.00001/1 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000023.11:g.120109204G>A, NW_004070886.1:g.161634G>A, NC_000023.10:g.119243162G>A, XM_011531281.3:c.627C>T, XM_011531281.2:c.627C>T, XM_011531281.1:c.627C>T, NM_139282.3:c.543C>T, NM_139282.2:c.543C>T

Select item 130960031120.

rs1309600311 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:120115602 (GRCh38)
X:119249512 (GRCh37)
Canonical SPDI:: NC_000023.11:120115601:C:G
Gene:: RHOXF1 (Varview), RHOXF1-AS1 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.120115602C>G, NW_004070886.1:g.168032C>G, NC_000023.10:g.119249512C>G, XM_011531281.3:c.345G>C, XM_011531281.2:c.345G>C, XM_011531281.1:c.345G>C, NM_139282.3:c.261G>C, NM_139282.2:c.261G>C, XP_011529583.1:p.Glu115Asp, NP_644811.1:p.Glu87Asp

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