SNP Links for Protein (Select 767995738) - SNP

Links from Protein

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Select item 14903947411.

rs1490394741 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 17:46876633 (GRCh38)
17:44953999 (GRCh37)
Canonical SPDI:: NC_000017.11:46876632:C:G
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,coding_sequence_variant,missense_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.46876633C>G, NC_000017.10:g.44953999C>G, NG_029164.3:g.30032C>G, NM_003396.3:c.989C>G, NM_003396.2:c.989C>G, NM_003396.1:c.989C>G, NT_187663.1:g.1396050C>G, XM_011525178.3:c.1007C>G, XM_011525178.2:c.1007C>G, XM_011525178.1:c.1007C>G, NP_003387.1:p.Ser330Cys, XP_011523480.1:p.Ser336Cys

Select item 14783989242.

rs1478398924 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:46876651 (GRCh38)
17:44954017 (GRCh37)
Canonical SPDI:: NC_000017.11:46876650:A:G
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,coding_sequence_variant,missense_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000048/1 (ALFA)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.46876651A>G, NC_000017.10:g.44954017A>G, NG_029164.3:g.30050A>G, NM_003396.3:c.1007A>G, NM_003396.2:c.1007A>G, NM_003396.1:c.1007A>G, NT_187663.1:g.1396068A>G, XM_011525178.3:c.1025A>G, XM_011525178.2:c.1025A>G, XM_011525178.1:c.1025A>G, NP_003387.1:p.Gln336Arg, XP_011523480.1:p.Gln342Arg

Select item 14712033333.

rs1471203333 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:46875267 (GRCh38)
17:44952633 (GRCh37)
Canonical SPDI:: NC_000017.11:46875266:G:A
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,synonymous_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.46875267G>A, NC_000017.10:g.44952633G>A, NG_029164.3:g.28666G>A, NM_003396.3:c.501G>A, NM_003396.2:c.501G>A, NM_003396.1:c.501G>A, NM_001320458.2:c.501G>A, NM_001320458.1:c.501G>A, NT_187663.1:g.1394684G>A, XM_011525178.3:c.519G>A, XM_011525178.2:c.519G>A, XM_011525178.1:c.519G>A

Select item 14669009034.

rs1466900903 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:46872680 (GRCh38)
17:44950046 (GRCh37)
Canonical SPDI:: NC_000017.11:46872679:G:A
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.46872680G>A, NC_000017.10:g.44950046G>A, NG_029164.3:g.26079G>A, NM_003396.3:c.241G>A, NM_003396.2:c.241G>A, NM_003396.1:c.241G>A, NM_001320458.2:c.241G>A, NM_001320458.1:c.241G>A, NT_187663.1:g.1392097G>A, XM_011525178.3:c.259G>A, XM_011525178.2:c.259G>A, XM_011525178.1:c.259G>A, NP_003387.1:p.Ala81Thr, NP_001307387.1:p.Ala81Thr, XP_011523480.1:p.Ala87Thr

Select item 14665260115.

rs1466526011 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:46876610 (GRCh38)
17:44953976 (GRCh37)
Canonical SPDI:: NC_000017.11:46876609:C:T
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,synonymous_variant,intron_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.46876610C>T, NC_000017.10:g.44953976C>T, NG_029164.3:g.30009C>T, NM_003396.3:c.966C>T, NM_003396.2:c.966C>T, NM_003396.1:c.966C>T, NT_187663.1:g.1396027C>T, XM_011525178.3:c.984C>T, XM_011525178.2:c.984C>T, XM_011525178.1:c.984C>T

Select item 14625153546.

rs1462515354 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:46875176 (GRCh38)
17:44952542 (GRCh37)
Canonical SPDI:: NC_000017.11:46875175:C:T
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0.000047/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.46875176C>T, NC_000017.10:g.44952542C>T, NG_029164.3:g.28575C>T, NM_003396.3:c.410C>T, NM_003396.2:c.410C>T, NM_003396.1:c.410C>T, NM_001320458.2:c.410C>T, NM_001320458.1:c.410C>T, NT_187663.1:g.1394593C>T, XM_011525178.3:c.428C>T, XM_011525178.2:c.428C>T, XM_011525178.1:c.428C>T, NP_003387.1:p.Ala137Val, NP_001307387.1:p.Ala137Val, XP_011523480.1:p.Ala143Val

Select item 14578717447.

rs1457871744 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 17:46876603 (GRCh38)
17:44953969 (GRCh37)
Canonical SPDI:: NC_000017.11:46876602:A:G,NC_000017.11:46876602:A:T
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000043/1 (ALFA)
G=0.000004/1 (GnomAD_exomes)
T=0.000342/1 (KOREAN)
HGVS:: NC_000017.11:g.46876603A>G, NC_000017.11:g.46876603A>T, NC_000017.10:g.44953969A>G, NC_000017.10:g.44953969A>T, NG_029164.3:g.30002A>G, NG_029164.3:g.30002A>T, NM_003396.3:c.959A>G, NM_003396.3:c.959A>T, NM_003396.2:c.959A>G, NM_003396.2:c.959A>T, NM_003396.1:c.959A>G, NM_003396.1:c.959A>T, NT_187663.1:g.1396020A>G, NT_187663.1:g.1396020A>T, XM_011525178.3:c.977A>G, XM_011525178.3:c.977A>T, XM_011525178.2:c.977A>G, XM_011525178.2:c.977A>T, XM_011525178.1:c.977A>G, XM_011525178.1:c.977A>T, NP_003387.1:p.Tyr320Cys, NP_003387.1:p.Tyr320Phe, XP_011523480.1:p.Tyr326Cys, XP_011523480.1:p.Tyr326Phe

Select item 14551737398.

rs1455173739 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 17:46876473 (GRCh38)
17:44953839 (GRCh37)
Canonical SPDI:: NC_000017.11:46876472:A:C
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,synonymous_variant,intron_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.46876473A>C, NC_000017.10:g.44953839A>C, NG_029164.3:g.29872A>C, NM_003396.3:c.829A>C, NM_003396.2:c.829A>C, NM_003396.1:c.829A>C, NM_001320458.2:c.829A>C, NM_001320458.1:c.829A>C, NT_187663.1:g.1395890A>C, XM_011525178.3:c.847A>C, XM_011525178.2:c.847A>C, XM_011525178.1:c.847A>C

Select item 14504435799.

rs1450443579 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 17:46876450 (GRCh38)
17:44953816 (GRCh37)
Canonical SPDI:: NC_000017.11:46876449:G:C
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.46876450G>C, NC_000017.10:g.44953816G>C, NG_029164.3:g.29849G>C, NM_003396.3:c.806G>C, NM_003396.2:c.806G>C, NM_003396.1:c.806G>C, NM_001320458.2:c.806G>C, NM_001320458.1:c.806G>C, NT_187663.1:g.1395867G>C, XM_011525178.3:c.824G>C, XM_011525178.2:c.824G>C, XM_011525178.1:c.824G>C, NP_003387.1:p.Ser269Thr, NP_001307387.1:p.Ser269Thr, XP_011523480.1:p.Ser275Thr

Select item 144794589710.

rs1447945897 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:46876530 (GRCh38)
17:44953896 (GRCh37)
Canonical SPDI:: NC_000017.11:46876529:T:C
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.46876530T>C, NC_000017.10:g.44953896T>C, NG_029164.3:g.29929T>C, NM_003396.3:c.886T>C, NM_003396.2:c.886T>C, NM_003396.1:c.886T>C, NM_001320458.2:c.886T>C, NM_001320458.1:c.886T>C, NT_187663.1:g.1395947T>C, XM_011525178.3:c.904T>C, XM_011525178.2:c.904T>C, XM_011525178.1:c.904T>C, NP_003387.1:p.Tyr296His, NP_001307387.1:p.Tyr296His, XP_011523480.1:p.Tyr302His

Select item 144437139011.

rs1444371390 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:46876250 (GRCh38)
17:44953616 (GRCh37)
Canonical SPDI:: NC_000017.11:46876249:G:A
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,synonymous_variant,genic_downstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.46876250G>A, NC_000017.10:g.44953616G>A, NG_029164.3:g.29649G>A, NM_003396.3:c.606G>A, NM_003396.2:c.606G>A, NM_003396.1:c.606G>A, NM_001320458.2:c.606G>A, NM_001320458.1:c.606G>A, NT_187663.1:g.1395667G>A, XM_011525178.3:c.624G>A, XM_011525178.2:c.624G>A, XM_011525178.1:c.624G>A

Select item 143995199112.

rs1439951991 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:46876495 (GRCh38)
17:44953861 (GRCh37)
Canonical SPDI:: NC_000017.11:46876494:T:C
Gene:: WNT9B (Varview), LRRC37A2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.46876495T>C, NC_000017.10:g.44953861T>C, NG_029164.3:g.29894T>C, NM_003396.3:c.851T>C, NM_003396.2:c.851T>C, NM_003396.1:c.851T>C, NM_001320458.2:c.851T>C, NM_001320458.1:c.851T>C, NT_187663.1:g.1395912T>C, XM_011525178.3:c.869T>C, XM_011525178.2:c.869T>C, XM_011525178.1:c.869T>C, NP_003387.1:p.Met284Thr, NP_001307387.1:p.Met284Thr, XP_011523480.1:p.Met290Thr

Select item 143520256513.

rs1435202565 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:46833354 (GRCh38)
17:44910720 (GRCh37)
Canonical SPDI:: NC_000017.11:46833353:A:G
Gene:: WNT9B (Varview), LRRC37A2 (Varview), LOC101929777 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,synonymous_variant,genic_downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.46833354A>G, NC_000017.10:g.44910720A>G, NT_167251.2:g.1819081A>G, NT_167251.1:g.1677917A>G, NT_187663.1:g.1352777A>G, XM_011525178.3:c.9A>G, XM_011525178.2:c.9A>G, XM_011525178.1:c.9A>G