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Links from Protein

Items: 1 to 20 of 142

1.

rs1489490435 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    C>A,G,T [Show Flanks]
    Chromosome:
    16:75451733 (GRCh38)
    16:75485631 (GRCh37)
    Canonical SPDI:
    NC_000016.10:75451732:C:A,NC_000016.10:75451732:C:G,NC_000016.10:75451732:C:T
    Gene:
    TMEM170A (Varview)
    Functional Consequence:
    coding_sequence_variant,intron_variant,missense_variant,synonymous_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    T=0./0 (ALFA)
    A=0.000004/1 (GnomAD_exomes)
    T=0.000004/1 (TOPMED)
    HGVS:
    NC_000016.10:g.75451733C>A, NC_000016.10:g.75451733C>G, NC_000016.10:g.75451733C>T, NC_000016.9:g.75485631C>A, NC_000016.9:g.75485631C>G, NC_000016.9:g.75485631C>T, XM_011522869.3:c.213G>T, XM_011522869.3:c.213G>C, XM_011522869.3:c.213G>A, XM_011522869.2:c.213G>T, XM_011522869.2:c.213G>C, XM_011522869.2:c.213G>A, XM_011522869.1:c.213G>T, XM_011522869.1:c.213G>C, XM_011522869.1:c.213G>A, NM_145254.3:c.240G>T, NM_145254.3:c.240G>C, NM_145254.3:c.240G>A, NM_145254.2:c.240G>T, NM_145254.2:c.240G>C, NM_145254.2:c.240G>A, NM_145254.1:c.240G>T, NM_145254.1:c.240G>C, NM_145254.1:c.240G>A, XM_017022939.2:c.156G>T, XM_017022939.2:c.156G>C, XM_017022939.2:c.156G>A, XM_017022939.1:c.156G>T, XM_017022939.1:c.156G>C, XM_017022939.1:c.156G>A, NM_001304997.2:c.126G>T, NM_001304997.2:c.126G>C, NM_001304997.2:c.126G>A, NM_001304997.1:c.126G>T, NM_001304997.1:c.126G>C, NM_001304997.1:c.126G>A, XM_017022941.2:c.105G>T, XM_017022941.2:c.105G>C, XM_017022941.2:c.105G>A, XM_017022941.1:c.105G>T, XM_017022941.1:c.105G>C, XM_017022941.1:c.105G>A, XP_011521171.1:p.Arg71Ser, XP_011521171.1:p.Arg71Ser, NP_660297.1:p.Arg80Ser, NP_660297.1:p.Arg80Ser, XP_016878428.1:p.Arg52Ser, XP_016878428.1:p.Arg52Ser, NP_001291926.1:p.Arg42Ser, NP_001291926.1:p.Arg42Ser, XP_016878430.1:p.Arg35Ser, XP_016878430.1:p.Arg35Ser
    2.

    rs1487121633 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      T>A,C [Show Flanks]
      Chromosome:
      16:75463461 (GRCh38)
      16:75497359 (GRCh37)
      Canonical SPDI:
      NC_000016.10:75463460:T:A,NC_000016.10:75463460:T:C
      Gene:
      TMEM170A (Varview)
      Functional Consequence:
      coding_sequence_variant,missense_variant,genic_upstream_transcript_variant,intron_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      C=0./0 (ALFA)
      C=0.000043/6 (GnomAD)
      HGVS:
      3.

      rs1484692990 [Homo sapiens]
        Variant type:
        DELINS
        Alleles:
        ->C [Show Flanks]
        Chromosome:
        16:75463468 (GRCh38)
        16:75497367 (GRCh37)
        Canonical SPDI:
        NC_000016.10:75463468:C:CC
        Gene:
        TMEM170A (Varview)
        Functional Consequence:
        coding_sequence_variant,genic_upstream_transcript_variant,intron_variant,frameshift_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        CC=0./0 (ALFA)
        C=0.000011/3 (TOPMED)
        C=0.000029/4 (GnomAD)
        HGVS:
        4.

        rs1462125535 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          G>C [Show Flanks]
          Chromosome:
          16:75451686 (GRCh38)
          16:75485584 (GRCh37)
          Canonical SPDI:
          NC_000016.10:75451685:G:C
          Gene:
          TMEM170A (Varview)
          Functional Consequence:
          intron_variant,missense_variant,coding_sequence_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          C=0./0 (ALFA)
          C=0.000004/1 (TOPMED)
          C=0.000007/1 (GnomAD)
          HGVS:
          7.
          8.

          rs1433778085 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            G>A,C [Show Flanks]
            Chromosome:
            16:75463438 (GRCh38)
            16:75497336 (GRCh37)
            Canonical SPDI:
            NC_000016.10:75463437:G:A,NC_000016.10:75463437:G:C
            Gene:
            TMEM170A (Varview)
            Functional Consequence:
            intron_variant,coding_sequence_variant,missense_variant,genic_upstream_transcript_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            C=0./0 (ALFA)
            A=0.000011/3 (TOPMED)
            A=0.000014/2 (GnomAD)
            HGVS:
            9.

            rs1426000834 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>T [Show Flanks]
              Chromosome:
              16:75451681 (GRCh38)
              16:75485579 (GRCh37)
              Canonical SPDI:
              NC_000016.10:75451680:C:T
              Gene:
              TMEM170A (Varview)
              Functional Consequence:
              intron_variant,coding_sequence_variant,missense_variant
              Validated:
              by frequency,by cluster
              MAF:
              T=0.000004/1 (GnomAD_exomes)
              HGVS:
              10.

              rs1422701269 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                G>A [Show Flanks]
                Chromosome:
                16:75464240 (GRCh38)
                16:75498138 (GRCh37)
                Canonical SPDI:
                NC_000016.10:75464239:G:A
                Gene:
                TMEM170A (Varview)
                Functional Consequence:
                missense_variant,intron_variant,coding_sequence_variant,genic_upstream_transcript_variant
                HGVS:
                13.

                rs1399613291 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  T>G [Show Flanks]
                  Chromosome:
                  16:75464246 (GRCh38)
                  16:75498144 (GRCh37)
                  Canonical SPDI:
                  NC_000016.10:75464245:T:G
                  Gene:
                  TMEM170A (Varview)
                  Functional Consequence:
                  genic_upstream_transcript_variant,intron_variant,missense_variant,coding_sequence_variant
                  Validated:
                  by frequency,by alfa
                  MAF:
                  G=0./0 (ALFA)
                  G=0.000004/1 (TOPMED)
                  HGVS:
                  16.

                  rs1389978301 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    G>A [Show Flanks]
                    Chromosome:
                    16:75447623 (GRCh38)
                    16:75481521 (GRCh37)
                    Canonical SPDI:
                    NC_000016.10:75447622:G:A
                    Gene:
                    TMEM170A (Varview)
                    Functional Consequence:
                    coding_sequence_variant,synonymous_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    A=0.000043/1 (ALFA)
                    A=0.000007/1 (GnomAD)
                    A=0.000008/2 (GnomAD_exomes)
                    A=0.000011/3 (TOPMED)
                    HGVS:
                    20.

                    rs1363975161 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      G>A [Show Flanks]
                      Chromosome:
                      16:75463495 (GRCh38)
                      16:75497393 (GRCh37)
                      Canonical SPDI:
                      NC_000016.10:75463494:G:A
                      Gene:
                      TMEM170A (Varview)
                      Functional Consequence:
                      genic_upstream_transcript_variant,coding_sequence_variant,missense_variant,intron_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      A=0./0 (ALFA)
                      A=0.000007/1 (GnomAD)
                      A=0.000038/10 (TOPMED)
                      HGVS:

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