SNP Links for Protein (Select 767966126) - SNP

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:45808173 (GRCh38)
11:45829724 (GRCh37)
Canonical SPDI:: NC_000011.10:45808172:C:T
Gene:: SLC35C1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.45808173C>T, NC_000011.9:g.45829724C>T, NG_009875.1:g.9102C>T, XM_011520203.4:c.573C>T, XM_011520203.3:c.573C>T, XM_011520203.2:c.573C>T, XM_011520203.1:c.573C>T, XM_011520202.3:c.-370C>T

Select item 14604616347.

rs1460461634 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:45806095 (GRCh38)
11:45827646 (GRCh37)
Canonical SPDI:: NC_000011.10:45806094:C:T
Gene:: SLC35C1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,synonymous_variant,coding_sequence_variant
HGVS:: NC_000011.10:g.45806095C>T, NC_000011.9:g.45827646C>T, NG_009875.1:g.7024C>T, NM_018389.5:c.294C>T, NM_018389.4:c.294C>T, NM_001145265.2:c.255C>T, NM_001145265.1:c.255C>T, NM_001145266.1:c.255C>T, XM_011520203.4:c.294C>T, XM_011520203.3:c.294C>T, XM_011520203.2:c.294C>T, XM_011520203.1:c.294C>T

Select item 14550611418.

rs1455061141 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:45806051 (GRCh38)
11:45827602 (GRCh37)
Canonical SPDI:: NC_000011.10:45806050:A:T
Gene:: SLC35C1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.45806051A>T, NC_000011.9:g.45827602A>T, NG_009875.1:g.6980A>T, NM_018389.5:c.250A>T, NM_018389.4:c.250A>T, NM_001145265.2:c.211A>T, NM_001145265.1:c.211A>T, NM_001145266.1:c.211A>T, XM_011520203.4:c.250A>T, XM_011520203.3:c.250A>T, XM_011520203.2:c.250A>T, XM_011520203.1:c.250A>T, NP_060859.4:p.Thr84Ser, NP_001138737.1:p.Thr71Ser, NP_001138738.1:p.Thr71Ser, XP_011518505.1:p.Thr84Ser

Select item 14451260239.

rs1445126023 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 11:45805805 (GRCh38)
11:45827356 (GRCh37)
Canonical SPDI:: NC_000011.10:45805804:AA:A
Gene:: SLC35C1 (Varview)
Functional Consequence:: intron_variant,frameshift_variant,coding_sequence_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.45805806del, NC_000011.9:g.45827357del, NG_009875.1:g.6735del, NM_018389.5:c.5del, NM_018389.4:c.5del, XM_011520203.4:c.5del, XM_011520203.3:c.5del, XM_011520203.2:c.5del, XM_011520203.1:c.5del, NP_060859.4:p.Asn2fs, XP_011518505.1:p.Asn2fs

Select item 143957203410.

rs1439572034 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:45805825 (GRCh38)
11:45827376 (GRCh37)
Canonical SPDI:: NC_000011.10:45805824:G:A
Gene:: SLC35C1 (Varview)
Functional Consequence:: synonymous_variant,5_prime_UTR_variant,genic_upstream_transcript_variant,coding_sequence_variant
HGVS:: NC_000011.10:g.45805825G>A, NC_000011.9:g.45827376G>A, NG_009875.1:g.6754G>A, NM_018389.5:c.24G>A, NM_018389.4:c.24G>A, NM_001145265.2:c.-16G>A, NM_001145265.1:c.-16G>A, NM_001145266.1:c.-16G>A, XM_011520203.4:c.24G>A, XM_011520203.3:c.24G>A, XM_011520203.2:c.24G>A, XM_011520203.1:c.24G>A

Select item 143891127411.

rs1438911274 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:45806281 (GRCh38)
11:45827832 (GRCh37)
Canonical SPDI:: NC_000011.10:45806280:G:A,NC_000011.10:45806280:G:C
Gene:: SLC35C1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.45806281G>A, NC_000011.10:g.45806281G>C, NC_000011.9:g.45827832G>A, NC_000011.9:g.45827832G>C, NG_009875.1:g.7210G>A, NG_009875.1:g.7210G>C, NM_018389.5:c.480G>A, NM_018389.5:c.480G>C, NM_018389.4:c.480G>A, NM_018389.4:c.480G>C, NM_001145265.2:c.441G>A, NM_001145265.2:c.441G>C, NM_001145265.1:c.441G>A, NM_001145265.1:c.441G>C, NM_001145266.1:c.441G>A, NM_001145266.1:c.441G>C, XM_011520203.4:c.480G>A, XM_011520203.4:c.480G>C, XM_011520203.3:c.480G>A, XM_011520203.3:c.480G>C, XM_011520203.2:c.480G>A, XM_011520203.2:c.480G>C, XM_011520203.1:c.480G>A, XM_011520203.1:c.480G>C

Select item 143796930412.

rs1437969304 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:45805951 (GRCh38)
11:45827502 (GRCh37)
Canonical SPDI:: NC_000011.10:45805950:C:A,NC_000011.10:45805950:C:T
Gene:: SLC35C1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.00003/1 (ALFA)
HGVS:: NC_000011.10:g.45805951C>A, NC_000011.10:g.45805951C>T, NC_000011.9:g.45827502C>A, NC_000011.9:g.45827502C>T, NG_009875.1:g.6880C>A, NG_009875.1:g.6880C>T, NM_018389.5:c.150C>A, NM_018389.5:c.150C>T, NM_018389.4:c.150C>A, NM_018389.4:c.150C>T, NM_001145265.2:c.111C>A, NM_001145265.2:c.111C>T, NM_001145265.1:c.111C>A, NM_001145265.1:c.111C>T, NM_001145266.1:c.111C>A, NM_001145266.1:c.111C>T, XM_011520203.4:c.150C>A, XM_011520203.4:c.150C>T, XM_011520203.3:c.150C>A, XM_011520203.3:c.150C>T, XM_011520203.2:c.150C>A, XM_011520203.2:c.150C>T, XM_011520203.1:c.150C>A, XM_011520203.1:c.150C>T

Select item 143779461213.

rs1437794612 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:45806052 (GRCh38)
11:45827603 (GRCh37)
Canonical SPDI:: NC_000011.10:45806051:C:A
Gene:: SLC35C1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.45806052C>A, NC_000011.9:g.45827603C>A, NG_009875.1:g.6981C>A, NM_018389.5:c.251C>A, NM_018389.4:c.251C>A, NM_001145265.2:c.212C>A, NM_001145265.1:c.212C>A, NM_001145266.1:c.212C>A, XM_011520203.4:c.251C>A, XM_011520203.3:c.251C>A, XM_011520203.2:c.251C>A, XM_011520203.1:c.251C>A, NP_060859.4:p.Thr84Asn, NP_001138737.1:p.Thr71Asn, NP_001138738.1:p.Thr71Asn, XP_011518505.1:p.Thr84Asn

Select item 143408815014.

rs1434088150 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:45806272 (GRCh38)
11:45827823 (GRCh37)
Canonical SPDI:: NC_000011.10:45806271:C:T
Gene:: SLC35C1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.45806272C>T, NC_000011.9:g.45827823C>T, NG_009875.1:g.7201C>T, NM_018389.5:c.471C>T, NM_018389.4:c.471C>T, NM_001145265.2:c.432C>T, NM_001145265.1:c.432C>T, NM_001145266.1:c.432C>T, XM_011520203.4:c.471C>T, XM_011520203.3:c.471C>T, XM_011520203.2:c.471C>T, XM_011520203.1:c.471C>T

Select item 142732424715.

rs1427324247 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:45805885 (GRCh38)
11:45827436 (GRCh37)
Canonical SPDI:: NC_000011.10:45805884:C:A
Gene:: SLC35C1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.45805885C>A, NC_000011.9:g.45827436C>A, NG_009875.1:g.6814C>A, NM_018389.5:c.84C>A, NM_018389.4:c.84C>A, NM_001145265.2:c.45C>A, NM_001145265.1:c.45C>A, NM_001145266.1:c.45C>A, XM_011520203.4:c.84C>A, XM_011520203.3:c.84C>A, XM_011520203.2:c.84C>A, XM_011520203.1:c.84C>A

Select item 142554357116.

rs1425543571 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:45806260 (GRCh38)
11:45827811 (GRCh37)
Canonical SPDI:: NC_000011.10:45806259:C:T
Gene:: SLC35C1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,genic_upstream_transcript_variant,upstream_transcript_variant
HGVS:: NC_000011.10:g.45806260C>T, NC_000011.9:g.45827811C>T, NG_009875.1:g.7189C>T, NM_018389.5:c.459C>T, NM_018389.4:c.459C>T, NM_001145265.2:c.420C>T, NM_001145265.1:c.420C>T, NM_001145266.1:c.420C>T, XM_011520203.4:c.459C>T, XM_011520203.3:c.459C>T, XM_011520203.2:c.459C>T, XM_011520203.1:c.459C>T

Select item 142288439717.

rs1422884397 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:45808159 (GRCh38)
11:45829710 (GRCh37)
Canonical SPDI:: NC_000011.10:45808158:A:G
Gene:: SLC35C1 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,5_prime_UTR_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.45808159A>G, NC_000011.9:g.45829710A>G, NG_009875.1:g.9088A>G, XM_011520203.4:c.559A>G, XM_011520203.3:c.559A>G, XM_011520203.2:c.559A>G, XM_011520203.1:c.559A>G, XM_011520202.3:c.-384A>G, XP_011518505.1:p.Ile187Val

Select item 141882260218.

rs1418822602 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:45805936 (GRCh38)
11:45827487 (GRCh37)
Canonical SPDI:: NC_000011.10:45805935:C:G
Gene:: SLC35C1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.45805936C>G, NC_000011.9:g.45827487C>G, NG_009875.1:g.6865C>G, NM_018389.5:c.135C>G, NM_018389.4:c.135C>G, NM_001145265.2:c.96C>G, NM_001145265.1:c.96C>G, NM_001145266.1:c.96C>G, XM_011520203.4:c.135C>G, XM_011520203.3:c.135C>G, XM_011520203.2:c.135C>G, XM_011520203.1:c.135C>G

Select item 141639085219.

rs1416390852 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:45806118 (GRCh38)
11:45827669 (GRCh37)
Canonical SPDI:: NC_000011.10:45806117:G:C
Gene:: SLC35C1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.45806118G>C, NC_000011.9:g.45827669G>C, NG_009875.1:g.7047G>C, NM_018389.5:c.317G>C, NM_018389.4:c.317G>C, NM_001145265.2:c.278G>C, NM_001145265.1:c.278G>C, NM_001145266.1:c.278G>C, XM_011520203.4:c.317G>C, XM_011520203.3:c.317G>C, XM_011520203.2:c.317G>C, XM_011520203.1:c.317G>C, NP_060859.4:p.Ser106Thr, NP_001138737.1:p.Ser93Thr, NP_001138738.1:p.Ser93Thr, XP_011518505.1:p.Ser106Thr

Select item 140649280220.

rs1406492802 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:45806188 (GRCh38)
11:45827739 (GRCh37)
Canonical SPDI:: NC_000011.10:45806187:C:G,NC_000011.10:45806187:C:T
Gene:: SLC35C1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000011.10:g.45806188C>G, NC_000011.10:g.45806188C>T, NC_000011.9:g.45827739C>G, NC_000011.9:g.45827739C>T, NG_009875.1:g.7117C>G, NG_009875.1:g.7117C>T, NM_018389.5:c.387C>G, NM_018389.5:c.387C>T, NM_018389.4:c.387C>G, NM_018389.4:c.387C>T, NM_001145265.2:c.348C>G, NM_001145265.2:c.348C>T, NM_001145265.1:c.348C>G, NM_001145265.1:c.348C>T, NM_001145266.1:c.348C>G, NM_001145266.1:c.348C>T, XM_011520203.4:c.387C>G, XM_011520203.4:c.387C>T, XM_011520203.3:c.387C>G, XM_011520203.3:c.387C>T, XM_011520203.2:c.387C>G, XM_011520203.2:c.387C>T, XM_011520203.1:c.387C>G, XM_011520203.1:c.387C>T

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