SNP Links for Protein (Select 7657039) - SNP

Links from Protein

Items: 1 to 20 of 649

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Select item 14896764561.

rs1489676456 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:47309424 (GRCh38)
6:47277160 (GRCh37)
Canonical SPDI:: NC_000006.12:47309423:G:A
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000006.12:g.47309424G>A, NC_000006.11:g.47277160G>A, NM_014452.5:c.88C>T, NM_014452.4:c.88C>T, NP_055267.1:p.Leu30Phe

Select item 14885300052.

rs1488530005 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:47232864 (GRCh38)
6:47200600 (GRCh37)
Canonical SPDI:: NC_000006.12:47232863:G:T
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.47232864G>T, NC_000006.11:g.47200600G>T, NM_014452.5:c.1869C>A, NM_014452.4:c.1869C>A, NP_055267.1:p.Asp623Glu

Select item 14880862963.

rs1488086296 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:47253473 (GRCh38)
6:47221209 (GRCh37)
Canonical SPDI:: NC_000006.12:47253472:T:C
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000031/1 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.47253473T>C, NC_000006.11:g.47221209T>C, NM_014452.5:c.1292A>G, NM_014452.4:c.1292A>G, NP_055267.1:p.Lys431Arg

Select item 14865605604.

rs1486560560 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:47253291 (GRCh38)
6:47221027 (GRCh37)
Canonical SPDI:: NC_000006.12:47253290:C:T
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000006.12:g.47253291C>T, NC_000006.11:g.47221027C>T, NM_014452.5:c.1474G>A, NM_014452.4:c.1474G>A, NP_055267.1:p.Glu492Lys

Select item 14860551345.

rs1486055134 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:47253374 (GRCh38)
6:47221110 (GRCh37)
Canonical SPDI:: NC_000006.12:47253373:T:C
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.47253374T>C, NC_000006.11:g.47221110T>C, NM_014452.5:c.1391A>G, NM_014452.4:c.1391A>G, NP_055267.1:p.Gln464Arg

Select item 14856520516.

rs1485652051 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:47286455 (GRCh38)
6:47254191 (GRCh37)
Canonical SPDI:: NC_000006.12:47286454:A:G
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.47286455A>G, NC_000006.11:g.47254191A>G, NM_014452.5:c.237T>C, NM_014452.4:c.237T>C

Select item 14855374047.

rs1485537404 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:47286088 (GRCh38)
6:47253824 (GRCh37)
Canonical SPDI:: NC_000006.12:47286087:G:A
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.47286088G>A, NC_000006.11:g.47253824G>A, NM_014452.5:c.604C>T, NM_014452.4:c.604C>T, NP_055267.1:p.Pro202Ser

Select item 14846086718.

rs1484608671 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:47284241 (GRCh38)
6:47251977 (GRCh37)
Canonical SPDI:: NC_000006.12:47284240:G:T
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.47284241G>T, NC_000006.11:g.47251977G>T, NM_014452.5:c.940C>A, NM_014452.4:c.940C>A, NP_055267.1:p.Pro314Thr

Select item 14843702299.

rs1484370229 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 6:47232849 (GRCh38)
6:47200585 (GRCh37)
Canonical SPDI:: NC_000006.12:47232848:T:A,NC_000006.12:47232848:T:C
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000031/1 (ALFA)
A=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000012/3 (GnomAD_exomes)
HGVS:: NC_000006.12:g.47232849T>A, NC_000006.12:g.47232849T>C, NC_000006.11:g.47200585T>A, NC_000006.11:g.47200585T>C, NM_014452.5:c.1884A>T, NM_014452.5:c.1884A>G, NM_014452.4:c.1884A>T, NM_014452.4:c.1884A>G

Select item 148435733910.

rs1484357339 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:47253444 (GRCh38)
6:47221180 (GRCh37)
Canonical SPDI:: NC_000006.12:47253443:T:A
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.47253444T>A, NC_000006.11:g.47221180T>A, NM_014452.5:c.1321A>T, NM_014452.4:c.1321A>T, NP_055267.1:p.Ser441Cys

Select item 148396048311.

rs1483960483 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:47284182 (GRCh38)
6:47251918 (GRCh37)
Canonical SPDI:: NC_000006.12:47284181:C:T
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.47284182C>T, NC_000006.11:g.47251918C>T, NM_014452.5:c.999G>A, NM_014452.4:c.999G>A

Select item 147953575112.

rs1479535751 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:47284079 (GRCh38)
6:47251815 (GRCh37)
Canonical SPDI:: NC_000006.12:47284078:A:G
Gene:: TNFRSF21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.47284079A>G, NC_000006.11:g.47251815A>G, NM_014452.5:c.1102T>C, NM_014452.4:c.1102T>C, NP_055267.1:p.Cys368Arg

Select item 147664084513.

rs1476640845 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:47234758 (GRCh38)
6:47202494 (GRCh37)
Canonical SPDI:: NC_000006.12:47234757:G:A
Gene:: TNFRSF21 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by cluster
HGVS:: NC_000006.12:g.47234758G>A, NC_000006.11:g.47202494G>A, NM_014452.5:c.1650C>T, NM_014452.4:c.1650C>T

Select item 147660245514.

rs1476602455 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:47253439 (GRCh38)
6:47221175 (GRCh37)
Canonical SPDI:: NC_000006.12:47253438:C:T
Gene:: TNFRSF21 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.47253439C>T, NC_000006.11:g.47221175C>T, NM_014452.5:c.1326G>A, NM_014452.4:c.1326G>A

Select item 147578018715.

rs1475780187 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 6:47283981 (GRCh38)
6:47251717 (GRCh37)
Canonical SPDI:: NC_000006.12:47283980:T:G
Gene:: TNFRSF21 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.47283981T>G, NC_000006.11:g.47251717T>G, NM_014452.5:c.1200A>C, NM_014452.4:c.1200A>C

Select item 147416375716.

rs1474163757 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:47286384 (GRCh38)
6:47254120 (GRCh37)
Canonical SPDI:: NC_000006.12:47286383:A:C
Gene:: TNFRSF21 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000043/1 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.47286384A>C, NC_000006.11:g.47254120A>C, NM_014452.5:c.308T>G, NM_014452.4:c.308T>G, NP_055267.1:p.Ile103Arg

Select item 147384752117.

rs1473847521 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:47286177 (GRCh38)
6:47253913 (GRCh37)
Canonical SPDI:: NC_000006.12:47286176:G:A
Gene:: TNFRSF21 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.47286177G>A, NC_000006.11:g.47253913G>A, NM_014452.5:c.515C>T, NM_014452.4:c.515C>T, NP_055267.1:p.Ala172Val

Select item 147380052218.

rs1473800522 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:47309438 (GRCh38)
6:47277174 (GRCh37)
Canonical SPDI:: NC_000006.12:47309437:A:T
Gene:: TNFRSF21 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.47309438A>T, NC_000006.11:g.47277174A>T, NM_014452.5:c.74T>A, NM_014452.4:c.74T>A, NP_055267.1:p.Met25Lys

Select item 147318395519.

rs1473183955 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 6:47309447 (GRCh38)
6:47277183 (GRCh37)
Canonical SPDI:: NC_000006.12:47309446:G:C,NC_000006.12:47309446:G:T
Gene:: TNFRSF21 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by cluster
HGVS:: NC_000006.12:g.47309447G>C, NC_000006.12:g.47309447G>T, NC_000006.11:g.47277183G>C, NC_000006.11:g.47277183G>T, NM_014452.5:c.65C>G, NM_014452.5:c.65C>A, NM_014452.4:c.65C>G, NM_014452.4:c.65C>A, NP_055267.1:p.Thr22Arg, NP_055267.1:p.Thr22Lys

Select item 147172707520.

rs1471727075 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 6:47234876 (GRCh38)
6:47202612 (GRCh37)
Canonical SPDI:: NC_000006.12:47234875:A:
Gene:: TNFRSF21 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.47234876del, NC_000006.11:g.47202612del, NM_014452.5:c.1532del, NM_014452.4:c.1532del, NP_055267.1:p.Leu511fs

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Items: 1 to 20 of 649

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