SNP Links for Protein (Select 4758708) - SNP

Links from Protein

Items: 1 to 20 of 186

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Select item 14845686171.

rs1484568617 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:6624962 (GRCh38)
6:6625195 (GRCh37)
Canonical SPDI:: NC_000006.12:6624961:G:A
Gene:: LY86 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000006.12:g.6624962G>A, NC_000006.11:g.6625195G>A, NM_004271.4:c.173G>A, NM_004271.3:c.173G>A, NP_004262.1:p.Cys58Tyr

Select item 14751443852.

rs1475144385 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:6626369 (GRCh38)
6:6626602 (GRCh37)
Canonical SPDI:: NC_000006.12:6626368:C:T
Gene:: LY86 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
HGVS:: NC_000006.12:g.6626369C>T, NC_000006.11:g.6626602C>T, NM_004271.4:c.300C>T, NM_004271.3:c.300C>T

Select item 14731059103.

rs1473105910 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:6654549 (GRCh38)
6:6654782 (GRCh37)
Canonical SPDI:: NC_000006.12:6654548:A:T
Gene:: LY86 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.6654549A>T, NC_000006.11:g.6654782A>T, NM_004271.4:c.411A>T, NM_004271.3:c.411A>T, NP_004262.1:p.Glu137Asp

Select item 14695256654.

rs1469525665 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 6:6654553 (GRCh38)
6:6654786 (GRCh37)
Canonical SPDI:: NC_000006.12:6654552:C:A,NC_000006.12:6654552:C:T
Gene:: LY86 (Varview)
Functional Consequence:: missense_variant,stop_gained,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.6654553C>A, NC_000006.12:g.6654553C>T, NC_000006.11:g.6654786C>A, NC_000006.11:g.6654786C>T, NM_004271.4:c.415C>A, NM_004271.4:c.415C>T, NM_004271.3:c.415C>A, NM_004271.3:c.415C>T, NP_004262.1:p.Gln139Lys, NP_004262.1:p.Gln139Ter

Select item 14496466315.

rs1449646631 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 6:6654596 (GRCh38)
6:6654829 (GRCh37)
Canonical SPDI:: NC_000006.12:6654595:C:A
Gene:: LY86 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.6654596C>A, NC_000006.11:g.6654829C>A, NM_004271.4:c.458C>A, NM_004271.3:c.458C>A, NP_004262.1:p.Ala153Asp

Select item 14446576966.

rs1444657696 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 6:6626398 (GRCh38)
6:6626631 (GRCh37)
Canonical SPDI:: NC_000006.12:6626397:C:
Gene:: LY86 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.6626398del, NC_000006.11:g.6626631del, NM_004271.4:c.329del, NM_004271.3:c.329del, NP_004262.1:p.Ser110fs

Select item 14310949707.

rs1431094970 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:6624987 (GRCh38)
6:6625220 (GRCh37)
Canonical SPDI:: NC_000006.12:6624986:C:T
Gene:: LY86 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
HGVS:: NC_000006.12:g.6624987C>T, NC_000006.11:g.6625220C>T, NM_004271.4:c.198C>T, NM_004271.3:c.198C>T

Select item 14176451988.

rs1417645198 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:6588808 (GRCh38)
6:6589041 (GRCh37)
Canonical SPDI:: NC_000006.12:6588807:A:G
Gene:: LY86 (Varview), LY86-AS1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.6588808A>G, NC_000006.11:g.6589041A>G, NM_004271.4:c.74A>G, NM_004271.3:c.74A>G, NP_004262.1:p.Lys25Arg

Select item 14117506189.

rs1411750618 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:6588743 (GRCh38)
6:6588976 (GRCh37)
Canonical SPDI:: NC_000006.12:6588742:T:C
Gene:: LY86 (Varview), LY86-AS1 (Varview)
Functional Consequence:: intron_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.6588743T>C, NC_000006.11:g.6588976T>C, NM_004271.4:c.9T>C, NM_004271.3:c.9T>C

Select item 141087061210.

rs1410870612 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:6626381 (GRCh38)
6:6626614 (GRCh37)
Canonical SPDI:: NC_000006.12:6626380:G:A
Gene:: LY86 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000094/1 (ALFA)
A=0.000008/2 (GnomAD_exomes)
A=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.6626381G>A, NC_000006.11:g.6626614G>A, NM_004271.4:c.312G>A, NM_004271.3:c.312G>A

Select item 140994786611.

rs1409947866 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 6:6626316 (GRCh38)
6:6626549 (GRCh37)
Canonical SPDI:: NC_000006.12:6626315:C:A
Gene:: LY86 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.6626316C>A, NC_000006.11:g.6626549C>A, NM_004271.4:c.247C>A, NM_004271.3:c.247C>A, NP_004262.1:p.Leu83Ile

Select item 139669160812.

rs1396691608 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:6654567 (GRCh38)
6:6654800 (GRCh37)
Canonical SPDI:: NC_000006.12:6654566:A:T
Gene:: LY86 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.6654567A>T, NC_000006.11:g.6654800A>T, NM_004271.4:c.429A>T, NM_004271.3:c.429A>T, NP_004262.1:p.Glu143Asp

Select item 138640540313.

rs1386405403 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 6:6626313 (GRCh38)
6:6626546 (GRCh37)
Canonical SPDI:: NC_000006.12:6626312:T:C,NC_000006.12:6626312:T:G
Gene:: LY86 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.6626313T>C, NC_000006.12:g.6626313T>G, NC_000006.11:g.6626546T>C, NC_000006.11:g.6626546T>G, NM_004271.4:c.244T>C, NM_004271.4:c.244T>G, NM_004271.3:c.244T>C, NM_004271.3:c.244T>G, NP_004262.1:p.Phe82Leu, NP_004262.1:p.Phe82Val

Select item 138301102914.

rs1383011029 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 6:6588859 (GRCh38)
6:6589092 (GRCh37)
Canonical SPDI:: NC_000006.12:6588858:A:C,NC_000006.12:6588858:A:G
Gene:: LY86 (Varview), LY86-AS1 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
G=0.000008/2 (GnomAD_exomes)
C=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.6588859A>C, NC_000006.12:g.6588859A>G, NC_000006.11:g.6589092A>C, NC_000006.11:g.6589092A>G, NM_004271.4:c.125A>C, NM_004271.4:c.125A>G, NM_004271.3:c.125A>C, NM_004271.3:c.125A>G, NP_004262.1:p.Tyr42Ser, NP_004262.1:p.Tyr42Cys

Select item 138166998415.

rs1381669984 [Homo sapiens]

Variant type:: DELINS
Alleles:: AGGCTCA>- [Show Flanks]
Chromosome:: 6:6626339 (GRCh38)
6:6626572 (GRCh37)
Canonical SPDI:: NC_000006.12:6626334:CTCAAGGCTCA:CTCA
Gene:: LY86 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
HGVS:: NC_000006.12:g.6626339_6626345del, NC_000006.11:g.6626572_6626578del, NM_004271.4:c.270_276del, NM_004271.3:c.270_276del, NP_004262.1:p.Gln90fs

Select item 138047473916.

rs1380474739 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:6626341 (GRCh38)
6:6626574 (GRCh37)
Canonical SPDI:: NC_000006.12:6626340:G:T
Gene:: LY86 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.6626341G>T, NC_000006.11:g.6626574G>T, NM_004271.4:c.272G>T, NM_004271.3:c.272G>T, NP_004262.1:p.Gly91Val

Select item 136988677317.

rs1369886773 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 6:6588827 (GRCh38)
6:6589060 (GRCh37)
Canonical SPDI:: NC_000006.12:6588826:G:C
Gene:: LY86 (Varview), LY86-AS1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,intron_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.6588827G>C, NC_000006.11:g.6589060G>C, NM_004271.4:c.93G>C, NM_004271.3:c.93G>C

Select item 136311398018.

rs1363113980 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 6:6588822 (GRCh38)
6:6589055 (GRCh37)
Canonical SPDI:: NC_000006.12:6588821:C:A,NC_000006.12:6588821:C:T
Gene:: LY86 (Varview), LY86-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000043/1 (ALFA)
T=0.000012/3 (GnomAD_exomes)
T=0.00003/8 (TOPMED)
HGVS:: NC_000006.12:g.6588822C>A, NC_000006.12:g.6588822C>T, NC_000006.11:g.6589055C>A, NC_000006.11:g.6589055C>T, NM_004271.4:c.88C>A, NM_004271.4:c.88C>T, NM_004271.3:c.88C>A, NM_004271.3:c.88C>T, NP_004262.1:p.His30Asn, NP_004262.1:p.His30Tyr

Select item 136162766219.

rs1361627662 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:6588841 (GRCh38)
6:6589074 (GRCh37)
Canonical SPDI:: NC_000006.12:6588840:G:T
Gene:: LY86 (Varview), LY86-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.6588841G>T, NC_000006.11:g.6589074G>T, NM_004271.4:c.107G>T, NM_004271.3:c.107G>T, NP_004262.1:p.Ser36Ile

Select item 136117858920.

rs1361178589 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 6:6654626 (GRCh38)
6:6654859 (GRCh37)
Canonical SPDI:: NC_000006.12:6654625:G:C
Gene:: LY86 (Varview)
Functional Consequence:: stop_lost,terminator_codon_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.6654626G>C, NC_000006.11:g.6654859G>C, NM_004271.4:c.488G>C, NM_004271.3:c.488G>C, NP_004262.1:p.Ter163Ser

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