SNP Links for Protein (Select 4507875) - SNP

Links from Protein

Items: 1 to 20 of 613

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Select item 14902737841.

rs1490273784 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:100719890 (GRCh38)
1:101185446 (GRCh37)
Canonical SPDI:: NC_000001.11:100719889:A:C
Gene:: VCAM1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100719890A>C, NC_000001.10:g.101185446A>C, NG_023034.2:g.5150A>C, NM_001078.4:c.30A>C, NM_001078.3:c.30A>C, NM_080682.3:c.30A>C, NM_080682.2:c.30A>C, NM_001199834.2:c.30A>C, NM_001199834.1:c.30A>C

Select item 14889874192.

rs1488987419 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:100723336 (GRCh38)
1:101188892 (GRCh37)
Canonical SPDI:: NC_000001.11:100723335:C:T
Gene:: VCAM1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.100723336C>T, NC_000001.10:g.101188892C>T, NG_023034.2:g.8596C>T, NM_001078.4:c.657C>T, NM_001078.3:c.657C>T, NM_080682.3:c.657C>T, NM_080682.2:c.657C>T, NM_001199834.2:c.471C>T, NM_001199834.1:c.471C>T

Select item 14866045693.

rs1486604569 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:100732582 (GRCh38)
1:101198138 (GRCh37)
Canonical SPDI:: NC_000001.11:100732581:C:G
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.100732582C>G, NC_000001.10:g.101198138C>G, NG_023034.2:g.17842C>G, NM_001078.4:c.1690C>G, NM_001078.3:c.1690C>G, NM_080682.3:c.1414C>G, NM_080682.2:c.1414C>G, NM_001199834.2:c.1504C>G, NM_001199834.1:c.1504C>G, NP_001069.1:p.Leu564Val, NP_542413.1:p.Leu472Val, NP_001186763.1:p.Leu502Val

Select item 14823665264.

rs1482366526 [Homo sapiens]

Variant type:: DEL
Alleles:: GC>- [Show Flanks]
Chromosome:: 1:100724667 (GRCh38)
1:101190223 (GRCh37)
Canonical SPDI:: NC_000001.11:100724666:GC:
Gene:: VCAM1 (Varview)
Functional Consequence:: coding_sequence_variant,frameshift_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.100724667_100724668del, NC_000001.10:g.101190223_101190224del, NG_023034.2:g.9927_9928del, NM_001078.4:c.705_706del, NM_001078.3:c.705_706del, NM_080682.3:c.705_706del, NM_080682.2:c.705_706del, NM_001199834.2:c.519_520del, NM_001199834.1:c.519_520del, NP_001069.1:p.Lys235fs, NP_542413.1:p.Lys235fs, NP_001186763.1:p.Lys173fs

Select item 14821531925.

rs1482153192 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:100731414 (GRCh38)
1:101196970 (GRCh37)
Canonical SPDI:: NC_000001.11:100731413:T:C
Gene:: VCAM1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0.000111/1 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100731414T>C, NC_000001.10:g.101196970T>C, NG_023034.2:g.16674T>C, NM_001078.4:c.1421T>C, NM_001078.3:c.1421T>C, NM_080682.3:c.1145T>C, NM_080682.2:c.1145T>C, NM_001199834.2:c.1235T>C, NM_001199834.1:c.1235T>C, NP_001069.1:p.Ile474Thr, NP_542413.1:p.Ile382Thr, NP_001186763.1:p.Ile412Thr

Select item 14820690346.

rs1482069034 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:100738128 (GRCh38)
1:101203684 (GRCh37)
Canonical SPDI:: NC_000001.11:100738127:G:T
Gene:: VCAM1 (Varview)
Functional Consequence:: stop_gained,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.100738128G>T, NC_000001.10:g.101203684G>T, NG_023034.2:g.23388G>T, NM_001078.4:c.2065G>T, NM_001078.3:c.2065G>T, NM_080682.3:c.1789G>T, NM_080682.2:c.1789G>T, NM_001199834.2:c.1879G>T, NM_001199834.1:c.1879G>T, NP_001069.1:p.Glu689Ter, NP_542413.1:p.Glu597Ter, NP_001186763.1:p.Glu627Ter

Select item 14815964437.

rs1481596443 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:100729253 (GRCh38)
1:101194809 (GRCh37)
Canonical SPDI:: NC_000001.11:100729252:G:A
Gene:: VCAM1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00007/1 (ALFA)
A=0.00004/1 (TOMMO)
HGVS:: NC_000001.11:g.100729253G>A, NC_000001.10:g.101194809G>A, NG_023034.2:g.14513G>A, NM_001078.4:c.1075G>A, NM_001078.3:c.1075G>A, NM_001199834.2:c.889G>A, NM_001199834.1:c.889G>A, NP_001069.1:p.Val359Met, NP_001186763.1:p.Val297Met

Select item 14717500288.

rs1471750028 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:100734729 (GRCh38)
1:101200285 (GRCh37)
Canonical SPDI:: NC_000001.11:100734728:G:A
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100734729G>A, NC_000001.10:g.101200285G>A, NG_023034.2:g.19989G>A, NM_001078.4:c.2020G>A, NM_001078.3:c.2020G>A, NM_080682.3:c.1744G>A, NM_080682.2:c.1744G>A, NM_001199834.2:c.1834G>A, NM_001199834.1:c.1834G>A, NP_001069.1:p.Val674Ile, NP_542413.1:p.Val582Ile, NP_001186763.1:p.Val612Ile

Select item 14707911429.

rs1470791142 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:100729310 (GRCh38)
1:101194866 (GRCh37)
Canonical SPDI:: NC_000001.11:100729309:G:A
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.100729310G>A, NC_000001.10:g.101194866G>A, NG_023034.2:g.14570G>A, NM_001078.4:c.1132G>A, NM_001078.3:c.1132G>A, NM_001199834.2:c.946G>A, NM_001199834.1:c.946G>A, NP_001069.1:p.Glu378Lys, NP_001186763.1:p.Glu316Lys

Select item 146993924010.

rs1469939240 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:100732464 (GRCh38)
1:101198020 (GRCh37)
Canonical SPDI:: NC_000001.11:100732463:G:A
Gene:: VCAM1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100732464G>A, NC_000001.10:g.101198020G>A, NG_023034.2:g.17724G>A, NM_001078.4:c.1572G>A, NM_001078.3:c.1572G>A, NM_080682.3:c.1296G>A, NM_080682.2:c.1296G>A, NM_001199834.2:c.1386G>A, NM_001199834.1:c.1386G>A

Select item 146939830911.

rs1469398309 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:100720583 (GRCh38)
1:101186139 (GRCh37)
Canonical SPDI:: NC_000001.11:100720582:T:G
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100720583T>G, NC_000001.10:g.101186139T>G, NG_023034.2:g.5843T>G, NM_001078.4:c.172T>G, NM_001078.3:c.172T>G, NM_080682.3:c.172T>G, NM_080682.2:c.172T>G, NP_001069.1:p.Ser58Ala, NP_542413.1:p.Ser58Ala

Select item 146874724612.

rs1468747246 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 1:100729321 (GRCh38)
1:101194877 (GRCh37)
Canonical SPDI:: NC_000001.11:100729320:T:A,NC_000001.11:100729320:T:C
Gene:: VCAM1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,stop_gained,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.100729321T>A, NC_000001.11:g.100729321T>C, NC_000001.10:g.101194877T>A, NC_000001.10:g.101194877T>C, NG_023034.2:g.14581T>A, NG_023034.2:g.14581T>C, NM_001078.4:c.1143T>A, NM_001078.4:c.1143T>C, NM_001078.3:c.1143T>A, NM_001078.3:c.1143T>C, NM_001199834.2:c.957T>A, NM_001199834.2:c.957T>C, NM_001199834.1:c.957T>A, NM_001199834.1:c.957T>C, NP_001069.1:p.Tyr381Ter, NP_001186763.1:p.Tyr319Ter

Select item 146534482013.

rs1465344820 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:100732569 (GRCh38)
1:101198125 (GRCh37)
Canonical SPDI:: NC_000001.11:100732568:T:C,NC_000001.11:100732568:T:G
Gene:: VCAM1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.100732569T>C, NC_000001.11:g.100732569T>G, NC_000001.10:g.101198125T>C, NC_000001.10:g.101198125T>G, NG_023034.2:g.17829T>C, NG_023034.2:g.17829T>G, NM_001078.4:c.1677T>C, NM_001078.4:c.1677T>G, NM_001078.3:c.1677T>C, NM_001078.3:c.1677T>G, NM_080682.3:c.1401T>C, NM_080682.3:c.1401T>G, NM_080682.2:c.1401T>C, NM_080682.2:c.1401T>G, NM_001199834.2:c.1491T>C, NM_001199834.2:c.1491T>G, NM_001199834.1:c.1491T>C, NM_001199834.1:c.1491T>G

Select item 146486331714.

rs1464863317 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:100738234 (GRCh38)
1:101203790 (GRCh37)
Canonical SPDI:: NC_000001.11:100738233:A:G
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100738234A>G, NC_000001.10:g.101203790A>G, NG_023034.2:g.23494A>G, NM_001078.4:c.2171A>G, NM_001078.3:c.2171A>G, NM_080682.3:c.1895A>G, NM_080682.2:c.1895A>G, NM_001199834.2:c.1985A>G, NM_001199834.1:c.1985A>G, NP_001069.1:p.Asn724Ser, NP_542413.1:p.Asn632Ser, NP_001186763.1:p.Asn662Ser

Select item 146360514415.

rs1463605144 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:100738195 (GRCh38)
1:101203751 (GRCh37)
Canonical SPDI:: NC_000001.11:100738194:C:T
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.0002/1 (ALFA)
T=0.0002/1 (Estonian)
HGVS:: NC_000001.11:g.100738195C>T, NC_000001.10:g.101203751C>T, NG_023034.2:g.23455C>T, NM_001078.4:c.2132C>T, NM_001078.3:c.2132C>T, NM_080682.3:c.1856C>T, NM_080682.2:c.1856C>T, NM_001199834.2:c.1946C>T, NM_001199834.1:c.1946C>T, NP_001069.1:p.Pro711Leu, NP_542413.1:p.Pro619Leu, NP_001186763.1:p.Pro649Leu

Select item 146343024416.

rs1463430244 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:100734580 (GRCh38)
1:101200136 (GRCh37)
Canonical SPDI:: NC_000001.11:100734579:C:T
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100734580C>T, NC_000001.10:g.101200136C>T, NG_023034.2:g.19840C>T, NM_001078.4:c.1871C>T, NM_001078.3:c.1871C>T, NM_080682.3:c.1595C>T, NM_080682.2:c.1595C>T, NM_001199834.2:c.1685C>T, NM_001199834.1:c.1685C>T, NP_001069.1:p.Thr624Ile, NP_542413.1:p.Thr532Ile, NP_001186763.1:p.Thr562Ile

Select item 146253573917.

rs1462535739 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:100731306 (GRCh38)
1:101196862 (GRCh37)
Canonical SPDI:: NC_000001.11:100731305:T:C,NC_000001.11:100731305:T:G
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000094/1 (ALFA)
C=0.000008/2 (GnomAD_exomes)
C=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.100731306T>C, NC_000001.11:g.100731306T>G, NC_000001.10:g.101196862T>C, NC_000001.10:g.101196862T>G, NG_023034.2:g.16566T>C, NG_023034.2:g.16566T>G, NM_001078.4:c.1313T>C, NM_001078.4:c.1313T>G, NM_001078.3:c.1313T>C, NM_001078.3:c.1313T>G, NM_080682.3:c.1037T>C, NM_080682.3:c.1037T>G, NM_080682.2:c.1037T>C, NM_080682.2:c.1037T>G, NM_001199834.2:c.1127T>C, NM_001199834.2:c.1127T>G, NM_001199834.1:c.1127T>C, NM_001199834.1:c.1127T>G, NP_001069.1:p.Ile438Thr, NP_001069.1:p.Ile438Ser, NP_542413.1:p.Ile346Thr, NP_542413.1:p.Ile346Ser, NP_001186763.1:p.Ile376Thr, NP_001186763.1:p.Ile376Ser

Select item 146238163818.

rs1462381638 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:100724668 (GRCh38)
1:101190224 (GRCh37)
Canonical SPDI:: NC_000001.11:100724667:C:G
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100724668C>G, NC_000001.10:g.101190224C>G, NG_023034.2:g.9928C>G, NM_001078.4:c.706C>G, NM_001078.3:c.706C>G, NM_080682.3:c.706C>G, NM_080682.2:c.706C>G, NM_001199834.2:c.520C>G, NM_001199834.1:c.520C>G, NP_001069.1:p.Leu236Val, NP_542413.1:p.Leu236Val, NP_001186763.1:p.Leu174Val

Select item 146223086119.

rs1462230861 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:100732592 (GRCh38)
1:101198148 (GRCh37)
Canonical SPDI:: NC_000001.11:100732591:T:A
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.100732592T>A, NC_000001.10:g.101198148T>A, NG_023034.2:g.17852T>A, NM_001078.4:c.1700T>A, NM_001078.3:c.1700T>A, NM_080682.3:c.1424T>A, NM_080682.2:c.1424T>A, NM_001199834.2:c.1514T>A, NM_001199834.1:c.1514T>A, NP_001069.1:p.Ile567Asn, NP_542413.1:p.Ile475Asn, NP_001186763.1:p.Ile505Asn

Select item 146064037820.

rs1460640378 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:100731279 (GRCh38)
1:101196835 (GRCh37)
Canonical SPDI:: NC_000001.11:100731278:G:A
Gene:: VCAM1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.100731279G>A, NC_000001.10:g.101196835G>A, NG_023034.2:g.16539G>A, NM_001078.4:c.1286G>A, NM_001078.3:c.1286G>A, NM_080682.3:c.1010G>A, NM_080682.2:c.1010G>A, NM_001199834.2:c.1100G>A, NM_001199834.1:c.1100G>A, NP_001069.1:p.Ser429Asn, NP_542413.1:p.Ser337Asn, NP_001186763.1:p.Ser367Asn

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