SNP Links for Protein (Select 4503097) - SNP

Links from Protein

Items: 1 to 20 of 191

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Select item 14896905871.

rs1489690587 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:58196829 (GRCh38)
16:58230733 (GRCh37)
Canonical SPDI:: NC_000016.10:58196828:G:C
Gene:: CSNK2A2 (Varview), CCDC113 (Varview)
Functional Consequence:: stop_gained,coding_sequence_variant,2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.58196829G>C, NC_000016.9:g.58230733G>C, NM_001896.4:c.120C>G, NM_001896.3:c.120C>G, NM_001896.2:c.120C>G, XM_005255801.4:c.-288C>G, XM_005255801.3:c.-288C>G, XM_005255801.2:c.-288C>G, XM_005255801.1:c.-288C>G, XM_047433626.1:c.120C>G, NP_001887.1:p.Tyr40Ter, XP_047289582.1:p.Tyr40Ter

Select item 14861823602.

rs1486182360 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:58167244 (GRCh38)
16:58201148 (GRCh37)
Canonical SPDI:: NC_000016.10:58167243:C:T
Gene:: CSNK2A2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.58167244C>T, NC_000016.9:g.58201148C>T, NM_001896.4:c.689G>A, NM_001896.3:c.689G>A, NM_001896.2:c.689G>A, XM_005255801.4:c.278G>A, XM_005255801.3:c.278G>A, XM_005255801.2:c.278G>A, XM_005255801.1:c.278G>A, XM_017022945.2:c.365G>A, XM_017022945.1:c.365G>A, XM_047433626.1:c.689G>A, NP_001887.1:p.Arg230Lys, XP_005255858.1:p.Arg93Lys, XP_016878434.1:p.Arg122Lys, XP_047289582.1:p.Arg230Lys

Select item 14751546283.

rs1475154628 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:58167213 (GRCh38)
16:58201117 (GRCh37)
Canonical SPDI:: NC_000016.10:58167212:A:G
Gene:: CSNK2A2 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000085/3 (ALFA)
G=0.000015/4 (TOPMED)
G=0.000016/4 (GnomAD_exomes)
G=0.000021/3 (GnomAD)
HGVS:: NC_000016.10:g.58167213A>G, NC_000016.9:g.58201117A>G, NM_001896.4:c.720T>C, NM_001896.3:c.720T>C, NM_001896.2:c.720T>C, XM_005255801.4:c.309T>C, XM_005255801.3:c.309T>C, XM_005255801.2:c.309T>C, XM_005255801.1:c.309T>C, XM_017022945.2:c.396T>C, XM_017022945.1:c.396T>C, XM_047433626.1:c.720T>C

Select item 14747676314.

rs1474767631 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:58197685 (GRCh38)
16:58231589 (GRCh37)
Canonical SPDI:: NC_000016.10:58197684:T:C
Gene:: CSNK2A2 (Varview), CCDC113 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.58197685T>C, NC_000016.9:g.58231589T>C, NM_001896.4:c.52A>G, NM_001896.3:c.52A>G, NM_001896.2:c.52A>G, XM_047433626.1:c.52A>G, NP_001887.1:p.Ser18Gly, XP_047289582.1:p.Ser18Gly

Select item 14706164745.

rs1470616474 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:58196813 (GRCh38)
16:58230717 (GRCh37)
Canonical SPDI:: NC_000016.10:58196812:G:A
Gene:: CSNK2A2 (Varview), CCDC113 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,coding_sequence_variant,missense_variant,5_prime_UTR_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.58196813G>A, NC_000016.9:g.58230717G>A, NM_001896.4:c.136C>T, NM_001896.3:c.136C>T, NM_001896.2:c.136C>T, XM_005255801.4:c.-272C>T, XM_005255801.3:c.-272C>T, XM_005255801.2:c.-272C>T, XM_005255801.1:c.-272C>T, XM_047433626.1:c.136C>T, NP_001887.1:p.Leu46Phe, XP_047289582.1:p.Leu46Phe

Select item 14651131216.

rs1465113121 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:58165694 (GRCh38)
16:58199598 (GRCh37)
Canonical SPDI:: NC_000016.10:58165693:C:T
Gene:: CSNK2A2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.58165694C>T, NC_000016.9:g.58199598C>T, NM_001896.4:c.842G>A, NM_001896.3:c.842G>A, NM_001896.2:c.842G>A, XM_005255801.4:c.431G>A, XM_005255801.3:c.431G>A, XM_005255801.2:c.431G>A, XM_005255801.1:c.431G>A, XM_017022945.2:c.518G>A, XM_017022945.1:c.518G>A, XM_047433626.1:c.842G>A, NP_001887.1:p.Arg281His, XP_005255858.1:p.Arg144His, XP_016878434.1:p.Arg173His, XP_047289582.1:p.Arg281His

Select item 14611191557.

rs1461119155 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:58186821 (GRCh38)
16:58220725 (GRCh37)
Canonical SPDI:: NC_000016.10:58186820:C:A
Gene:: CSNK2A2 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.58186821C>A, NC_000016.9:g.58220725C>A, NM_001896.4:c.252G>T, NM_001896.3:c.252G>T, NM_001896.2:c.252G>T, XM_005255801.4:c.-160G>T, XM_005255801.3:c.-160G>T, XM_005255801.2:c.-160G>T, XM_005255801.1:c.-160G>T, XM_047433626.1:c.252G>T, NP_001887.1:p.Lys84Asn, XP_047289582.1:p.Lys84Asn

Select item 14593705338.

rs1459370533 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 16:58197716 (GRCh38)
16:58231620 (GRCh37)
Canonical SPDI:: NC_000016.10:58197715:G:A,NC_000016.10:58197715:G:C
Gene:: CSNK2A2 (Varview), CCDC113 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000015/4 (TOPMED)
HGVS:: NC_000016.10:g.58197716G>A, NC_000016.10:g.58197716G>C, NC_000016.9:g.58231620G>A, NC_000016.9:g.58231620G>C, NM_001896.4:c.21C>T, NM_001896.4:c.21C>G, NM_001896.3:c.21C>T, NM_001896.3:c.21C>G, NM_001896.2:c.21C>T, NM_001896.2:c.21C>G, XM_047433626.1:c.21C>T, XM_047433626.1:c.21C>G

Select item 14534410689.

rs1453441068 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:58174464 (GRCh38)
16:58208368 (GRCh37)
Canonical SPDI:: NC_000016.10:58174463:T:C
Gene:: CSNK2A2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.58174464T>C, NC_000016.9:g.58208368T>C, NM_001896.4:c.416A>G, NM_001896.3:c.416A>G, NM_001896.2:c.416A>G, XM_005255801.4:c.5A>G, XM_005255801.3:c.5A>G, XM_005255801.2:c.5A>G, XM_005255801.1:c.5A>G, XM_047433626.1:c.416A>G, NP_001887.1:p.Tyr139Cys, XP_005255858.1:p.Tyr2Cys, XP_047289582.1:p.Tyr139Cys

Select item 145164593110.

rs1451645931 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:58166612 (GRCh38)
16:58200516 (GRCh37)
Canonical SPDI:: NC_000016.10:58166611:C:T
Gene:: CSNK2A2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000016.10:g.58166612C>T, NC_000016.9:g.58200516C>T, NM_001896.4:c.799G>A, NM_001896.3:c.799G>A, NM_001896.2:c.799G>A, XM_005255801.4:c.388G>A, XM_005255801.3:c.388G>A, XM_005255801.2:c.388G>A, XM_005255801.1:c.388G>A, XM_017022945.2:c.475G>A, XM_017022945.1:c.475G>A, XM_047433626.1:c.799G>A, NP_001887.1:p.Asp267Asn, XP_005255858.1:p.Asp130Asn, XP_016878434.1:p.Asp159Asn, XP_047289582.1:p.Asp267Asn

Select item 144046654311.

rs1440466543 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:58166652 (GRCh38)
16:58200556 (GRCh37)
Canonical SPDI:: NC_000016.10:58166651:T:C
Gene:: CSNK2A2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.58166652T>C, NC_000016.9:g.58200556T>C, NM_001896.4:c.759A>G, NM_001896.3:c.759A>G, NM_001896.2:c.759A>G, XM_005255801.4:c.348A>G, XM_005255801.3:c.348A>G, XM_005255801.2:c.348A>G, XM_005255801.1:c.348A>G, XM_017022945.2:c.435A>G, XM_017022945.1:c.435A>G, XM_047433626.1:c.759A>G

Select item 143718949012.

rs1437189490 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:58186790 (GRCh38)
16:58220694 (GRCh37)
Canonical SPDI:: NC_000016.10:58186789:T:C
Gene:: CSNK2A2 (Varview)
Functional Consequence:: 5_prime_UTR_variant,coding_sequence_variant,missense_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000016.10:g.58186790T>C, NC_000016.9:g.58220694T>C, NM_001896.4:c.283A>G, NM_001896.3:c.283A>G, NM_001896.2:c.283A>G, XM_005255801.4:c.-129A>G, XM_005255801.3:c.-129A>G, XM_005255801.2:c.-129A>G, XM_005255801.1:c.-129A>G, XM_047433626.1:c.283A>G, NP_001887.1:p.Ile95Val, XP_047289582.1:p.Ile95Val

Select item 143559127113.

rs1435591271 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:58166596 (GRCh38)
16:58200500 (GRCh37)
Canonical SPDI:: NC_000016.10:58166595:T:C
Gene:: CSNK2A2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.58166596T>C, NC_000016.9:g.58200500T>C, NM_001896.4:c.815A>G, NM_001896.3:c.815A>G, NM_001896.2:c.815A>G, XM_005255801.4:c.404A>G, XM_005255801.3:c.404A>G, XM_005255801.2:c.404A>G, XM_005255801.1:c.404A>G, XM_017022945.2:c.491A>G, XM_017022945.1:c.491A>G, XM_047433626.1:c.815A>G, NP_001887.1:p.Asp272Gly, XP_005255858.1:p.Asp135Gly, XP_016878434.1:p.Asp164Gly, XP_047289582.1:p.Asp272Gly

Select item 143446148914.

rs1434461489 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 16:58196790 (GRCh38)
16:58230694 (GRCh37)
Canonical SPDI:: NC_000016.10:58196789:T:G
Gene:: CSNK2A2 (Varview), CCDC113 (Varview)
Functional Consequence:: 5_prime_UTR_variant,coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000016.10:g.58196790T>G, NC_000016.9:g.58230694T>G, NM_001896.4:c.159A>C, NM_001896.3:c.159A>C, NM_001896.2:c.159A>C, XM_005255801.4:c.-249A>C, XM_005255801.3:c.-249A>C, XM_005255801.2:c.-249A>C, XM_005255801.1:c.-249A>C, XM_047433626.1:c.159A>C, NP_001887.1:p.Glu53Asp, XP_047289582.1:p.Glu53Asp

Select item 143394058315.

rs1433940583 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 16:58174508 (GRCh38)
16:58208412 (GRCh37)
Canonical SPDI:: NC_000016.10:58174507:T:A,NC_000016.10:58174507:T:C
Gene:: CSNK2A2 (Varview)
Functional Consequence:: 5_prime_UTR_variant,synonymous_variant,coding_sequence_variant,missense_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000102/2 (ALFA)
A=0.000007/1 (GnomAD)
C=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000016.10:g.58174508T>A, NC_000016.10:g.58174508T>C, NC_000016.9:g.58208412T>A, NC_000016.9:g.58208412T>C, NM_001896.4:c.372A>T, NM_001896.4:c.372A>G, NM_001896.3:c.372A>T, NM_001896.3:c.372A>G, NM_001896.2:c.372A>T, NM_001896.2:c.372A>G, XM_005255801.4:c.-40A>T, XM_005255801.4:c.-40A>G, XM_005255801.3:c.-40A>T, XM_005255801.3:c.-40A>G, XM_005255801.2:c.-40A>T, XM_005255801.2:c.-40A>G, XM_005255801.1:c.-40A>T, XM_005255801.1:c.-40A>G, XM_047433626.1:c.372A>T, XM_047433626.1:c.372A>G, NP_001887.1:p.Gln124His, XP_047289582.1:p.Gln124His

Select item 143152524416.

rs1431525244 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:58186805 (GRCh38)
16:58220709 (GRCh37)
Canonical SPDI:: NC_000016.10:58186804:G:A
Gene:: CSNK2A2 (Varview)
Functional Consequence:: 5_prime_UTR_variant,coding_sequence_variant,missense_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.58186805G>A, NC_000016.9:g.58220709G>A, NM_001896.4:c.268C>T, NM_001896.3:c.268C>T, NM_001896.2:c.268C>T, XM_005255801.4:c.-144C>T, XM_005255801.3:c.-144C>T, XM_005255801.2:c.-144C>T, XM_005255801.1:c.-144C>T, XM_047433626.1:c.268C>T, NP_001887.1:p.Arg90Cys, XP_047289582.1:p.Arg90Cys

Select item 143138552117.

rs1431385521 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:58197677 (GRCh38)
16:58231581 (GRCh37)
Canonical SPDI:: NC_000016.10:58197676:C:T
Gene:: CSNK2A2 (Varview), CCDC113 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
HGVS:: NC_000016.10:g.58197677C>T, NC_000016.9:g.58231581C>T, NM_001896.4:c.60G>A, NM_001896.3:c.60G>A, NM_001896.2:c.60G>A, XM_047433626.1:c.60G>A

Select item 143113444618.

rs1431134446 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:58166682 (GRCh38)
16:58200586 (GRCh37)
Canonical SPDI:: NC_000016.10:58166681:A:G
Gene:: CSNK2A2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000012/3 (GnomAD_exomes)
G=0.000015/4 (TOPMED)
G=0.000684/2 (KOREAN)
HGVS:: NC_000016.10:g.58166682A>G, NC_000016.9:g.58200586A>G, NM_001896.4:c.729T>C, NM_001896.3:c.729T>C, NM_001896.2:c.729T>C, XM_005255801.4:c.318T>C, XM_005255801.3:c.318T>C, XM_005255801.2:c.318T>C, XM_005255801.1:c.318T>C, XM_017022945.2:c.405T>C, XM_017022945.1:c.405T>C, XM_047433626.1:c.729T>C

Select item 142265579619.

rs1422655796 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>-,GG [Show Flanks]
Chromosome:: 16:58164144 (GRCh38)
16:58198048 (GRCh37)
Canonical SPDI:: NC_000016.10:58164143:GGG:GG,NC_000016.10:58164143:GGG:GGGG
Gene:: CSNK2A2 (Varview)
Functional Consequence:: coding_sequence_variant,frameshift_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGG=0./0 (ALFA)
-=0.00016/1 (1000Genomes)
HGVS:: NC_000016.10:g.58164146del, NC_000016.10:g.58164146dup, NC_000016.9:g.58198050del, NC_000016.9:g.58198050dup, NM_001896.4:c.980del, NM_001896.4:c.980dup, NM_001896.3:c.980del, NM_001896.3:c.980dup, NM_001896.2:c.980del, NM_001896.2:c.980dup, XM_005255801.4:c.569del, XM_005255801.4:c.569dup, XM_005255801.3:c.569del, XM_005255801.3:c.569dup, XM_005255801.2:c.569del, XM_005255801.2:c.569dup, XM_005255801.1:c.569del, XM_005255801.1:c.569dup, XM_017022945.2:c.656del, XM_017022945.2:c.656dup, XM_017022945.1:c.656del, XM_017022945.1:c.656dup, XM_047433626.1:c.980del, XM_047433626.1:c.980dup, NP_001887.1:p.Pro327fs, NP_001887.1:p.Val328fs, XP_005255858.1:p.Pro190fs, XP_005255858.1:p.Val191fs, XP_016878434.1:p.Pro219fs, XP_016878434.1:p.Val220fs, XP_047289582.1:p.Pro327fs, XP_047289582.1:p.Val328fs

Select item 141939470420.

rs1419394704 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:58168614 (GRCh38)
16:58202518 (GRCh37)
Canonical SPDI:: NC_000016.10:58168613:T:C
Gene:: CSNK2A2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.58168614T>C, NC_000016.9:g.58202518T>C, NM_001896.4:c.509A>G, NM_001896.3:c.509A>G, NM_001896.2:c.509A>G, XM_005255801.4:c.98A>G, XM_005255801.3:c.98A>G, XM_005255801.2:c.98A>G, XM_005255801.1:c.98A>G, XM_017022945.2:c.185A>G, XM_017022945.1:c.185A>G, XM_047433626.1:c.509A>G, NP_001887.1:p.Lys170Arg, XP_005255858.1:p.Lys33Arg, XP_016878434.1:p.Lys62Arg, XP_047289582.1:p.Lys170Arg

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