SNP Links for Protein (Select 4501989) - SNP

Links from Protein

Items: 1 to 20 of 594

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Select item 14865853591.

rs1486585359 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:73445080 (GRCh38)
4:74310797 (GRCh37)
Canonical SPDI:: NC_000004.12:73445079:G:A
Gene:: AFP (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.73445080G>A, NC_000004.11:g.74310797G>A, NG_023028.1:g.13865G>A, NM_001134.3:c.801G>A, NM_001134.2:c.801G>A, NM_001134.1:c.801G>A, NM_001354717.2:c.327G>A, NM_001354717.1:c.327G>A

Select item 14841822492.

rs1484182249 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:73447550 (GRCh38)
4:74313267 (GRCh37)
Canonical SPDI:: NC_000004.12:73447549:G:T
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.73447550G>T, NC_000004.11:g.74313267G>T, NG_023028.1:g.16335G>T, NM_001134.3:c.932G>T, NM_001134.2:c.932G>T, NM_001134.1:c.932G>T, NM_001354717.2:c.458G>T, NM_001354717.1:c.458G>T, NP_001125.1:p.Gly311Val, NP_001341646.2:p.Gly153Val

Select item 14835582923.

rs1483558292 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:73453879 (GRCh38)
4:74319596 (GRCh37)
Canonical SPDI:: NC_000004.12:73453878:A:T
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000004.12:g.73453879A>T, NC_000004.11:g.74319596A>T, NG_023028.1:g.22664A>T, NM_001134.3:c.1767A>T, NM_001134.2:c.1767A>T, NM_001134.1:c.1767A>T, NM_001354717.2:c.1293A>T, NM_001354717.1:c.1293A>T, NP_001125.1:p.Glu589Asp, NP_001341646.2:p.Glu431Asp

Select item 14834846434.

rs1483484643 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:73450104 (GRCh38)
4:74315821 (GRCh37)
Canonical SPDI:: NC_000004.12:73450103:G:T
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.73450104G>T, NC_000004.11:g.74315821G>T, NG_023028.1:g.18889G>T, NM_001134.3:c.1260G>T, NM_001134.2:c.1260G>T, NM_001134.1:c.1260G>T, NM_001354717.2:c.786G>T, NM_001354717.1:c.786G>T, NG_083398.1:g.295G>T, NP_001125.1:p.Gln420His, NP_001341646.2:p.Gln262His

Select item 14831315125.

rs1483131512 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:73452443 (GRCh38)
4:74318160 (GRCh37)
Canonical SPDI:: NC_000004.12:73452442:A:T
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73452443A>T, NC_000004.11:g.74318160A>T, NG_023028.1:g.21228A>T, NM_001134.3:c.1471A>T, NM_001134.2:c.1471A>T, NM_001134.1:c.1471A>T, NM_001354717.2:c.997A>T, NM_001354717.1:c.997A>T, NP_001125.1:p.Thr491Ser, NP_001341646.2:p.Thr333Ser

Select item 14822633016.

rs1482263301 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:73438293 (GRCh38)
4:74304010 (GRCh37)
Canonical SPDI:: NC_000004.12:73438292:G:T
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,5_prime_UTR_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73438293G>T, NC_000004.11:g.74304010G>T, NG_023028.1:g.7078G>T, NM_001134.3:c.257G>T, NM_001134.2:c.257G>T, NM_001134.1:c.257G>T, NM_001354717.2:c.-76G>T, NM_001354717.1:c.-76G>T, NP_001125.1:p.Cys86Phe

Select item 14797159987.

rs1479715998 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 4:73436281 (GRCh38)
4:74301999 (GRCh37)
Canonical SPDI:: NC_000004.12:73436281:TTTTTTT:TTTTTTTT
Gene:: AFP (Varview)
Functional Consequence:: 5_prime_UTR_variant,coding_sequence_variant,frameshift_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73436288dup, NC_000004.11:g.74302005dup, NG_023028.1:g.5073dup, NM_001134.3:c.26dup, NM_001134.2:c.26dup, NM_001134.1:c.26dup, NM_001354717.2:c.-307dup, NM_001354717.1:c.-307dup, NG_056260.1:g.6196dup, NP_001125.1:p.Leu9fs

Select item 14719884798.

rs1471988479 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 4:73447478 (GRCh38)
4:74313195 (GRCh37)
Canonical SPDI:: NC_000004.12:73447477:A:C,NC_000004.12:73447477:A:G
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73447478A>C, NC_000004.12:g.73447478A>G, NC_000004.11:g.74313195A>C, NC_000004.11:g.74313195A>G, NG_023028.1:g.16263A>C, NG_023028.1:g.16263A>G, NM_001134.3:c.860A>C, NM_001134.3:c.860A>G, NM_001134.2:c.860A>C, NM_001134.2:c.860A>G, NM_001134.1:c.860A>C, NM_001134.1:c.860A>G, NM_001354717.2:c.386A>C, NM_001354717.2:c.386A>G, NM_001354717.1:c.386A>C, NM_001354717.1:c.386A>G, NP_001125.1:p.Tyr287Ser, NP_001125.1:p.Tyr287Cys, NP_001341646.2:p.Tyr129Ser, NP_001341646.2:p.Tyr129Cys

Select item 14641949329.

rs1464194932 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:73443396 (GRCh38)
4:74309113 (GRCh37)
Canonical SPDI:: NC_000004.12:73443395:A:G
Gene:: AFP (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.73443396A>G, NC_000004.11:g.74309113A>G, NG_023028.1:g.12181A>G, NM_001134.3:c.665A>G, NM_001134.2:c.665A>G, NM_001134.1:c.665A>G, NM_001354717.2:c.191A>G, NM_001354717.1:c.191A>G, NP_001125.1:p.His222Arg, NP_001341646.2:p.His64Arg

Select item 146117215810.

rs1461172158 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:73440707 (GRCh38)
4:74306424 (GRCh37)
Canonical SPDI:: NC_000004.12:73440706:C:T
Gene:: AFP (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.73440707C>T, NC_000004.11:g.74306424C>T, NG_023028.1:g.9492C>T, NM_001134.3:c.376C>T, NM_001134.2:c.376C>T, NM_001134.1:c.376C>T, NP_001125.1:p.Leu126Phe

Select item 145735257311.

rs1457352573 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:73445047 (GRCh38)
4:74310764 (GRCh37)
Canonical SPDI:: NC_000004.12:73445046:G:A
Gene:: AFP (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73445047G>A, NC_000004.11:g.74310764G>A, NG_023028.1:g.13832G>A, NM_001134.3:c.768G>A, NM_001134.2:c.768G>A, NM_001134.1:c.768G>A, NM_001354717.2:c.294G>A, NM_001354717.1:c.294G>A

Select item 145576316312.

rs1455763163 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 4:73445119 (GRCh38)
4:74310836 (GRCh37)
Canonical SPDI:: NC_000004.12:73445118:T:A
Gene:: AFP (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.73445119T>A, NC_000004.11:g.74310836T>A, NG_023028.1:g.13904T>A, NM_001134.3:c.840T>A, NM_001134.2:c.840T>A, NM_001134.1:c.840T>A, NM_001354717.2:c.366T>A, NM_001354717.1:c.366T>A, NP_001125.1:p.Asp280Glu, NP_001341646.2:p.Asp122Glu

Select item 145508551113.

rs1455085511 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:73453822 (GRCh38)
4:74319539 (GRCh37)
Canonical SPDI:: NC_000004.12:73453821:T:C
Gene:: AFP (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000004.12:g.73453822T>C, NC_000004.11:g.74319539T>C, NG_023028.1:g.22607T>C, NM_001134.3:c.1710T>C, NM_001134.2:c.1710T>C, NM_001134.1:c.1710T>C, NM_001354717.2:c.1236T>C, NM_001354717.1:c.1236T>C

Select item 145339850614.

rs1453398506 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 4:73447563 (GRCh38)
4:74313280 (GRCh37)
Canonical SPDI:: NC_000004.12:73447562:T:A
Gene:: AFP (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.73447563T>A, NC_000004.11:g.74313280T>A, NG_023028.1:g.16348T>A, NM_001134.3:c.945T>A, NM_001134.2:c.945T>A, NM_001134.1:c.945T>A, NM_001354717.2:c.471T>A, NM_001354717.1:c.471T>A

Select item 145326773115.

rs1453267731 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:73445035 (GRCh38)
4:74310752 (GRCh37)
Canonical SPDI:: NC_000004.12:73445034:T:C
Gene:: AFP (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.73445035T>C, NC_000004.11:g.74310752T>C, NG_023028.1:g.13820T>C, NM_001134.3:c.756T>C, NM_001134.2:c.756T>C, NM_001134.1:c.756T>C, NM_001354717.2:c.282T>C, NM_001354717.1:c.282T>C

Select item 145292147516.

rs1452921475 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:73436273 (GRCh38)
4:74301990 (GRCh37)
Canonical SPDI:: NC_000004.12:73436272:T:C
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,5_prime_UTR_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73436273T>C, NC_000004.11:g.74301990T>C, NG_023028.1:g.5058T>C, NM_001134.3:c.11T>C, NM_001134.2:c.11T>C, NM_001134.1:c.11T>C, NM_001354717.2:c.-322T>C, NM_001354717.1:c.-322T>C, NG_056260.1:g.6181T>C, NP_001125.1:p.Val4Ala

Select item 145154650417.

rs1451546504 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:73440696 (GRCh38)
4:74306413 (GRCh37)
Canonical SPDI:: NC_000004.12:73440695:A:G
Gene:: AFP (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.73440696A>G, NC_000004.11:g.74306413A>G, NG_023028.1:g.9481A>G, NM_001134.3:c.365A>G, NM_001134.2:c.365A>G, NM_001134.1:c.365A>G, NP_001125.1:p.His122Arg

Select item 144930079718.

rs1449300797 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:73447586 (GRCh38)
4:74313303 (GRCh37)
Canonical SPDI:: NC_000004.12:73447585:C:T
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.73447586C>T, NC_000004.11:g.74313303C>T, NG_023028.1:g.16371C>T, NM_001134.3:c.968C>T, NM_001134.2:c.968C>T, NM_001134.1:c.968C>T, NM_001354717.2:c.494C>T, NM_001354717.1:c.494C>T, NP_001125.1:p.Pro323Leu, NP_001341646.2:p.Pro165Leu

Select item 144793212219.

rs1447932122 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:73450109 (GRCh38)
4:74315826 (GRCh37)
Canonical SPDI:: NC_000004.12:73450108:T:C
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.73450109T>C, NC_000004.11:g.74315826T>C, NG_023028.1:g.18894T>C, NM_001134.3:c.1265T>C, NM_001134.2:c.1265T>C, NM_001134.1:c.1265T>C, NM_001354717.2:c.791T>C, NM_001354717.1:c.791T>C, NG_083398.1:g.300T>C, NP_001125.1:p.Leu422Pro, NP_001341646.2:p.Leu264Pro

Select item 144773582220.

rs1447735822 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:73436284 (GRCh38)
4:74302001 (GRCh37)
Canonical SPDI:: NC_000004.12:73436283:T:C
Gene:: AFP (Varview)
Functional Consequence:: missense_variant,5_prime_UTR_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.73436284T>C, NC_000004.11:g.74302001T>C, NG_023028.1:g.5069T>C, NM_001134.3:c.22T>C, NM_001134.2:c.22T>C, NM_001134.1:c.22T>C, NM_001354717.2:c.-311T>C, NM_001354717.1:c.-311T>C, NG_056260.1:g.6192T>C, NP_001125.1:p.Phe8Leu

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