SNP Links for Protein (Select 42475970) - SNP

Links from Protein

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Select item 14890887101.

rs1489088710 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:15110663 (GRCh38)
19:15221474 (GRCh37)
Canonical SPDI:: NC_000019.10:15110662:G:A
Gene:: SYDE1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
HGVS:: NC_000019.10:g.15110663G>A, NC_000019.9:g.15221474G>A, NM_033025.6:c.1218G>A, NM_033025.5:c.1218G>A, NM_033025.4:c.1218G>A, XM_024451750.2:c.1218G>A, XM_024451750.1:c.1218G>A, NM_001300910.2:c.1017G>A, NM_001300910.1:c.1017G>A, XM_047439579.1:c.1524G>A, XM_047439580.1:c.1524G>A, XM_047439581.1:c.1017G>A

Select item 14873909652.

rs1487390965 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:15110601 (GRCh38)
19:15221412 (GRCh37)
Canonical SPDI:: NC_000019.10:15110600:G:A
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.15110601G>A, NC_000019.9:g.15221412G>A, NM_033025.6:c.1156G>A, NM_033025.5:c.1156G>A, NM_033025.4:c.1156G>A, XM_024451750.2:c.1156G>A, XM_024451750.1:c.1156G>A, NM_001300910.2:c.955G>A, NM_001300910.1:c.955G>A, XM_047439579.1:c.1462G>A, XM_047439580.1:c.1462G>A, XM_047439581.1:c.955G>A, NP_149014.3:p.Glu386Lys, XP_024307518.1:p.Glu386Lys, NP_001287839.1:p.Glu319Lys, XP_047295535.1:p.Glu488Lys, XP_047295536.1:p.Glu488Lys, XP_047295537.1:p.Glu319Lys

Select item 14868047293.

rs1486804729 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:15109764 (GRCh38)
19:15220575 (GRCh37)
Canonical SPDI:: NC_000019.10:15109763:G:A
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.15109764G>A, NC_000019.9:g.15220575G>A, NM_033025.6:c.491G>A, NM_033025.5:c.491G>A, NM_033025.4:c.491G>A, XM_024451750.2:c.491G>A, XM_024451750.1:c.491G>A, NM_001300910.2:c.290G>A, NM_001300910.1:c.290G>A, XM_047439579.1:c.797G>A, XM_047439580.1:c.797G>A, XM_047439581.1:c.290G>A, NP_149014.3:p.Arg164Lys, XP_024307518.1:p.Arg164Lys, NP_001287839.1:p.Arg97Lys, XP_047295535.1:p.Arg266Lys, XP_047295536.1:p.Arg266Lys, XP_047295537.1:p.Arg97Lys

Select item 14867373704.

rs1486737370 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:15109967 (GRCh38)
19:15220778 (GRCh37)
Canonical SPDI:: NC_000019.10:15109966:G:A,NC_000019.10:15109966:G:T
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00005/4 (GnomAD_exomes)
HGVS:: NC_000019.10:g.15109967G>A, NC_000019.10:g.15109967G>T, NC_000019.9:g.15220778G>A, NC_000019.9:g.15220778G>T, NM_033025.6:c.694G>A, NM_033025.6:c.694G>T, NM_033025.5:c.694G>A, NM_033025.5:c.694G>T, NM_033025.4:c.694G>A, NM_033025.4:c.694G>T, XM_024451750.2:c.694G>A, XM_024451750.2:c.694G>T, XM_024451750.1:c.694G>A, XM_024451750.1:c.694G>T, NM_001300910.2:c.493G>A, NM_001300910.2:c.493G>T, NM_001300910.1:c.493G>A, NM_001300910.1:c.493G>T, XM_047439579.1:c.1000G>A, XM_047439579.1:c.1000G>T, XM_047439580.1:c.1000G>A, XM_047439580.1:c.1000G>T, XM_047439581.1:c.493G>A, XM_047439581.1:c.493G>T, NP_149014.3:p.Asp232Asn, NP_149014.3:p.Asp232Tyr, XP_024307518.1:p.Asp232Asn, XP_024307518.1:p.Asp232Tyr, NP_001287839.1:p.Asp165Asn, NP_001287839.1:p.Asp165Tyr, XP_047295535.1:p.Asp334Asn, XP_047295535.1:p.Asp334Tyr, XP_047295536.1:p.Asp334Asn, XP_047295536.1:p.Asp334Tyr, XP_047295537.1:p.Asp165Asn, XP_047295537.1:p.Asp165Tyr

Select item 14863531165.

rs1486353116 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:15110209 (GRCh38)
19:15221020 (GRCh37)
Canonical SPDI:: NC_000019.10:15110208:C:T
Gene:: SYDE1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.15110209C>T, NC_000019.9:g.15221020C>T, NM_033025.6:c.936C>T, NM_033025.5:c.936C>T, NM_033025.4:c.936C>T, XM_024451750.2:c.936C>T, XM_024451750.1:c.936C>T, NM_001300910.2:c.735C>T, NM_001300910.1:c.735C>T, XM_047439579.1:c.1242C>T, XM_047439580.1:c.1242C>T, XM_047439581.1:c.735C>T

Select item 14858212486.

rs1485821248 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:15110023 (GRCh38)
19:15220834 (GRCh37)
Canonical SPDI:: NC_000019.10:15110022:C:T
Gene:: SYDE1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.00002/2 (GnomAD_exomes)
HGVS:: NC_000019.10:g.15110023C>T, NC_000019.9:g.15220834C>T, NM_033025.6:c.750C>T, NM_033025.5:c.750C>T, NM_033025.4:c.750C>T, XM_024451750.2:c.750C>T, XM_024451750.1:c.750C>T, NM_001300910.2:c.549C>T, NM_001300910.1:c.549C>T, XM_047439579.1:c.1056C>T, XM_047439580.1:c.1056C>T, XM_047439581.1:c.549C>T

Select item 14858040497.

rs1485804049 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:15112386 (GRCh38)
19:15223197 (GRCh37)
Canonical SPDI:: NC_000019.10:15112385:C:T
Gene:: SYDE1 (Varview)
Functional Consequence:: synonymous_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.15112386C>T, NC_000019.9:g.15223197C>T, NM_033025.6:c.1619C>T, NM_033025.5:c.1619C>T, NM_033025.4:c.1619C>T, XM_024451750.2:c.1458C>T, XM_024451750.1:c.1458C>T, NM_001300910.2:c.1418C>T, NM_001300910.1:c.1418C>T, XM_047439579.1:c.1925C>T, XM_047439580.1:c.1764C>T, XM_047439581.1:c.1257C>T, NP_149014.3:p.Ser540Phe, NP_001287839.1:p.Ser473Phe, XP_047295535.1:p.Ser642Phe

Select item 14834800868.

rs1483480086 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:15109247 (GRCh38)
19:15220058 (GRCh37)
Canonical SPDI:: NC_000019.10:15109246:A:G
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.15109247A>G, NC_000019.9:g.15220058A>G, NM_033025.6:c.280A>G, NM_033025.5:c.280A>G, NM_033025.4:c.280A>G, XM_024451750.2:c.280A>G, XM_024451750.1:c.280A>G, XM_047439579.1:c.280A>G, XM_047439580.1:c.280A>G, NP_149014.3:p.Thr94Ala, XP_024307518.1:p.Thr94Ala, XP_047295535.1:p.Thr94Ala, XP_047295536.1:p.Thr94Ala

Select item 14819313119.

rs1481931311 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:15110068 (GRCh38)
19:15220879 (GRCh37)
Canonical SPDI:: NC_000019.10:15110067:G:A
Gene:: SYDE1 (Varview)
Functional Consequence:: stop_gained,coding_sequence_variant
HGVS:: NC_000019.10:g.15110068G>A, NC_000019.9:g.15220879G>A, NM_033025.6:c.795G>A, NM_033025.5:c.795G>A, NM_033025.4:c.795G>A, XM_024451750.2:c.795G>A, XM_024451750.1:c.795G>A, NM_001300910.2:c.594G>A, NM_001300910.1:c.594G>A, XM_047439579.1:c.1101G>A, XM_047439580.1:c.1101G>A, XM_047439581.1:c.594G>A, NP_149014.3:p.Trp265Ter, XP_024307518.1:p.Trp265Ter, NP_001287839.1:p.Trp198Ter, XP_047295535.1:p.Trp367Ter, XP_047295536.1:p.Trp367Ter, XP_047295537.1:p.Trp198Ter

Select item 148177547210.

rs1481775472 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 19:15109892 (GRCh38)
19:15220703 (GRCh37)
Canonical SPDI:: NC_000019.10:15109891:G:A,NC_000019.10:15109891:G:C
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.15109892G>A, NC_000019.10:g.15109892G>C, NC_000019.9:g.15220703G>A, NC_000019.9:g.15220703G>C, NM_033025.6:c.619G>A, NM_033025.6:c.619G>C, NM_033025.5:c.619G>A, NM_033025.5:c.619G>C, NM_033025.4:c.619G>A, NM_033025.4:c.619G>C, XM_024451750.2:c.619G>A, XM_024451750.2:c.619G>C, XM_024451750.1:c.619G>A, XM_024451750.1:c.619G>C, NM_001300910.2:c.418G>A, NM_001300910.2:c.418G>C, NM_001300910.1:c.418G>A, NM_001300910.1:c.418G>C, XM_047439579.1:c.925G>A, XM_047439579.1:c.925G>C, XM_047439580.1:c.925G>A, XM_047439580.1:c.925G>C, XM_047439581.1:c.418G>A, XM_047439581.1:c.418G>C, NP_149014.3:p.Asp207Asn, NP_149014.3:p.Asp207His, XP_024307518.1:p.Asp207Asn, XP_024307518.1:p.Asp207His, NP_001287839.1:p.Asp140Asn, NP_001287839.1:p.Asp140His, XP_047295535.1:p.Asp309Asn, XP_047295535.1:p.Asp309His, XP_047295536.1:p.Asp309Asn, XP_047295536.1:p.Asp309His, XP_047295537.1:p.Asp140Asn, XP_047295537.1:p.Asp140His

Select item 148096110511.

rs1480961105 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 19:15109818 (GRCh38)
19:15220629 (GRCh37)
Canonical SPDI:: NC_000019.10:15109817:T:A
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.15109818T>A, NC_000019.9:g.15220629T>A, NM_033025.6:c.545T>A, NM_033025.5:c.545T>A, NM_033025.4:c.545T>A, XM_024451750.2:c.545T>A, XM_024451750.1:c.545T>A, NM_001300910.2:c.344T>A, NM_001300910.1:c.344T>A, XM_047439579.1:c.851T>A, XM_047439580.1:c.851T>A, XM_047439581.1:c.344T>A, NP_149014.3:p.Leu182Gln, XP_024307518.1:p.Leu182Gln, NP_001287839.1:p.Leu115Gln, XP_047295535.1:p.Leu284Gln, XP_047295536.1:p.Leu284Gln, XP_047295537.1:p.Leu115Gln

Select item 148034442012.

rs1480344420 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:15109091 (GRCh38)
19:15219902 (GRCh37)
Canonical SPDI:: NC_000019.10:15109090:G:A
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
HGVS:: NC_000019.10:g.15109091G>A, NC_000019.9:g.15219902G>A, NM_033025.6:c.124G>A, NM_033025.5:c.124G>A, NM_033025.4:c.124G>A, XM_024451750.2:c.124G>A, XM_024451750.1:c.124G>A, XM_047439579.1:c.124G>A, XM_047439580.1:c.124G>A, NP_149014.3:p.Glu42Lys, XP_024307518.1:p.Glu42Lys, XP_047295535.1:p.Glu42Lys, XP_047295536.1:p.Glu42Lys

Select item 148019385813.

rs1480193858 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:15111729 (GRCh38)
19:15222540 (GRCh37)
Canonical SPDI:: NC_000019.10:15111728:C:G
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.15111729C>G, NC_000019.9:g.15222540C>G, NM_033025.6:c.1515C>G, NM_033025.5:c.1515C>G, NM_033025.4:c.1515C>G, NM_001300910.2:c.1314C>G, NM_001300910.1:c.1314C>G, XM_047439579.1:c.1821C>G, NP_149014.3:p.Asn505Lys, NP_001287839.1:p.Asn438Lys, XP_047295535.1:p.Asn607Lys

Select item 148003912514.

rs1480039125 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:15112535 (GRCh38)
19:15223346 (GRCh37)
Canonical SPDI:: NC_000019.10:15112534:A:G
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000019.10:g.15112535A>G, NC_000019.9:g.15223346A>G, NM_033025.6:c.1768A>G, NM_033025.5:c.1768A>G, NM_033025.4:c.1768A>G, XM_024451750.2:c.1607A>G, XM_024451750.1:c.1607A>G, NM_001300910.2:c.1567A>G, NM_001300910.1:c.1567A>G, XM_047439579.1:c.2074A>G, XM_047439580.1:c.1913A>G, XM_047439581.1:c.1406A>G, NP_149014.3:p.Ile590Val, XP_024307518.1:p.His536Arg, NP_001287839.1:p.Ile523Val, XP_047295535.1:p.Ile692Val, XP_047295536.1:p.His638Arg, XP_047295537.1:p.His469Arg

Select item 147840884815.

rs1478408848 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:15111743 (GRCh38)
19:15222554 (GRCh37)
Canonical SPDI:: NC_000019.10:15111742:C:T
Gene:: SYDE1 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
HGVS:: NC_000019.10:g.15111743C>T, NC_000019.9:g.15222554C>T, NM_033025.6:c.1529C>T, NM_033025.5:c.1529C>T, NM_033025.4:c.1529C>T, NM_001300910.2:c.1328C>T, NM_001300910.1:c.1328C>T, XM_047439579.1:c.1835C>T, NP_149014.3:p.Thr510Ile, NP_001287839.1:p.Thr443Ile, XP_047295535.1:p.Thr612Ile

Select item 147799279516.

rs1477992795 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:15111678 (GRCh38)
19:15222489 (GRCh37)
Canonical SPDI:: NC_000019.10:15111677:C:G
Gene:: SYDE1 (Varview)
Functional Consequence:: synonymous_variant,intron_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0./0 (GnomAD)
HGVS:: NC_000019.10:g.15111678C>G, NC_000019.9:g.15222489C>G, NM_033025.6:c.1464C>G, NM_033025.5:c.1464C>G, NM_033025.4:c.1464C>G, NM_001300910.2:c.1263C>G, NM_001300910.1:c.1263C>G, XM_047439579.1:c.1770C>G

Select item 147612490717.

rs1476124907 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:15110290 (GRCh38)
19:15221101 (GRCh37)
Canonical SPDI:: NC_000019.10:15110289:C:T
Gene:: SYDE1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (GnomAD)
T=0.000004/1 (TOPMED)
C=0.5/1 (SGDP_PRJ)
HGVS:: NC_000019.10:g.15110290C>T, NC_000019.9:g.15221101C>T, NM_033025.6:c.1017C>T, NM_033025.5:c.1017C>T, NM_033025.4:c.1017C>T, XM_024451750.2:c.1017C>T, XM_024451750.1:c.1017C>T, NM_001300910.2:c.816C>T, NM_001300910.1:c.816C>T, XM_047439579.1:c.1323C>T, XM_047439580.1:c.1323C>T, XM_047439581.1:c.816C>T

Select item 147574733018.

rs1475747330 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:15113669 (GRCh38)
19:15224480 (GRCh37)
Canonical SPDI:: NC_000019.10:15113668:C:A
Gene:: SYDE1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000142/2 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000019.10:g.15113669C>A, NC_000019.9:g.15224480C>A, NM_033025.6:c.1914C>A, NM_033025.5:c.1914C>A, NM_033025.4:c.1914C>A, XM_024451750.2:c.1753C>A, XM_024451750.1:c.1753C>A, NM_001300910.2:c.1713C>A, NM_001300910.1:c.1713C>A, XM_047439579.1:c.2220C>A, XM_047439580.1:c.2059C>A, XM_047439581.1:c.1552C>A

Select item 147390968319.

rs1473909683 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 19:15107439 (GRCh38)
19:15218250 (GRCh37)
Canonical SPDI:: NC_000019.10:15107438:C:G,NC_000019.10:15107438:C:T
Gene:: SYDE1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.15107439C>G, NC_000019.10:g.15107439C>T, NC_000019.9:g.15218250C>G, NC_000019.9:g.15218250C>T, NM_033025.6:c.6C>G, NM_033025.6:c.6C>T, NM_033025.5:c.6C>G, NM_033025.5:c.6C>T, NM_033025.4:c.6C>G, NM_033025.4:c.6C>T, XM_024451750.2:c.6C>G, XM_024451750.2:c.6C>T, XM_024451750.1:c.6C>G, XM_024451750.1:c.6C>T, NM_001300910.2:c.6C>G, NM_001300910.2:c.6C>T, NM_001300910.1:c.6C>G, NM_001300910.1:c.6C>T, XM_047439579.1:c.6C>G, XM_047439579.1:c.6C>T, XM_047439580.1:c.6C>G, XM_047439580.1:c.6C>T, XM_047439581.1:c.6C>G, XM_047439581.1:c.6C>T

Select item 147367873020.

rs1473678730 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:15109954 (GRCh38)
19:15220765 (GRCh37)
Canonical SPDI:: NC_000019.10:15109953:C:T
Gene:: SYDE1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.15109954C>T, NC_000019.9:g.15220765C>T, NM_033025.6:c.681C>T, NM_033025.5:c.681C>T, NM_033025.4:c.681C>T, XM_024451750.2:c.681C>T, XM_024451750.1:c.681C>T, NM_001300910.2:c.480C>T, NM_001300910.1:c.480C>T, XM_047439579.1:c.987C>T, XM_047439580.1:c.987C>T, XM_047439581.1:c.480C>T

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