SNP Links for Protein (Select 29568105) - SNP

Links from Protein

Items: 1 to 20 of 332

<< First< Prev

Page of 17

Next >Last >>

Select item 14903477451.

rs1490347745 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:100509035 (GRCh38)
9:103271317 (GRCh37)
Canonical SPDI:: NC_000009.12:100509034:T:A
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.100509035T>A, NC_000009.11:g.103271317T>A, NM_003692.5:c.337T>A, NM_003692.4:c.337T>A, NM_001198812.1:c.559T>A, NP_003683.2:p.Ser113Thr, NP_001185741.1:p.Ser187Thr

Select item 14898824462.

rs1489882446 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:100547807 (GRCh38)
9:103310089 (GRCh37)
Canonical SPDI:: NC_000009.12:100547806:T:G
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.100547807T>G, NC_000009.11:g.103310089T>G, NM_003692.5:c.624T>G, NM_003692.4:c.624T>G, NM_001198812.1:c.846T>G, NP_003683.2:p.Ser208Arg, NP_001185741.1:p.Ser282Arg

Select item 14892803823.

rs1489280382 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:100561407 (GRCh38)
9:103323689 (GRCh37)
Canonical SPDI:: NC_000009.12:100561406:T:C
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.100561407T>C, NC_000009.11:g.103323689T>C, NM_003692.5:c.786T>C, NM_003692.4:c.786T>C, NM_001198812.1:c.1008T>C

Select item 14844138144.

rs1484413814 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:100550106 (GRCh38)
9:103312388 (GRCh37)
Canonical SPDI:: NC_000009.12:100550105:A:G
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.100550106A>G, NC_000009.11:g.103312388A>G, NM_003692.5:c.721A>G, NM_003692.4:c.721A>G, NM_001198812.1:c.943A>G, NP_003683.2:p.Thr241Ala, NP_001185741.1:p.Thr315Ala

Select item 14842527165.

rs1484252716 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:100513329 (GRCh38)
9:103275611 (GRCh37)
Canonical SPDI:: NC_000009.12:100513328:A:G
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.100513329A>G, NC_000009.11:g.103275611A>G, NM_003692.5:c.459A>G, NM_003692.4:c.459A>G, NM_001198812.1:c.681A>G

Select item 14795004116.

rs1479500411 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 9:100473619 (GRCh38)
9:103235901 (GRCh37)
Canonical SPDI:: NC_000009.12:100473618:G:C
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview), LOC124902237 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,coding_sequence_variant,synonymous_variant,2KB_upstream_variant
HGVS:: NC_000009.12:g.100473619G>C, NC_000009.11:g.103235901G>C, NM_003692.5:c.75G>C, NM_003692.4:c.75G>C

Select item 14786964457.

rs1478696445 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:100509066 (GRCh38)
9:103271348 (GRCh37)
Canonical SPDI:: NC_000009.12:100509065:T:C
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.100509066T>C, NC_000009.11:g.103271348T>C, NM_003692.5:c.368T>C, NM_003692.4:c.368T>C, NM_001198812.1:c.590T>C, NP_003683.2:p.Phe123Ser, NP_001185741.1:p.Phe197Ser

Select item 14771494918.

rs1477149491 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:100572615 (GRCh38)
9:103334897 (GRCh37)
Canonical SPDI:: NC_000009.12:100572614:G:A
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0.000111/1 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.100572615G>A, NC_000009.11:g.103334897G>A, NM_003692.5:c.997G>A, NM_003692.4:c.997G>A, NM_001198812.1:c.1219G>A, NP_003683.2:p.Ala333Thr, NP_001185741.1:p.Ala407Thr

Select item 14770986849.

rs1477098684 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:100473670 (GRCh38)
9:103235952 (GRCh37)
Canonical SPDI:: NC_000009.12:100473669:G:A
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview), LOC124902237 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,synonymous_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000019/5 (TOPMED)
A=0.000022/3 (GnomAD_exomes)
HGVS:: NC_000009.12:g.100473670G>A, NC_000009.11:g.103235952G>A, NM_003692.5:c.126G>A, NM_003692.4:c.126G>A

Select item 147595176010.

rs1475951760 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:100473704 (GRCh38)
9:103235986 (GRCh37)
Canonical SPDI:: NC_000009.12:100473703:T:C
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview), LOC124902237 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000008/1 (GnomAD_exomes)
C=0.000029/4 (GnomAD)
HGVS:: NC_000009.12:g.100473704T>C, NC_000009.11:g.103235986T>C, NM_003692.5:c.160T>C, NM_003692.4:c.160T>C, NP_003683.2:p.Cys54Arg

Select item 147530196511.

rs1475301965 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 9:100547744 (GRCh38)
9:103310026 (GRCh37)
Canonical SPDI:: NC_000009.12:100547743:G:A,NC_000009.12:100547743:G:C,NC_000009.12:100547743:G:T
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by cluster
MAF:: A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.100547744G>A, NC_000009.12:g.100547744G>C, NC_000009.12:g.100547744G>T, NC_000009.11:g.103310026G>A, NC_000009.11:g.103310026G>C, NC_000009.11:g.103310026G>T, NM_003692.5:c.561G>A, NM_003692.5:c.561G>C, NM_003692.5:c.561G>T, NM_003692.4:c.561G>A, NM_003692.4:c.561G>C, NM_003692.4:c.561G>T, NM_001198812.1:c.783G>A, NM_001198812.1:c.783G>C, NM_001198812.1:c.783G>T

Select item 147362141712.

rs1473621417 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:100516759 (GRCh38)
9:103279041 (GRCh37)
Canonical SPDI:: NC_000009.12:100516758:C:G,NC_000009.12:100516758:C:T
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000224/1 (ALFA)
G=0.000004/1 (GnomAD_exomes)
T=0.000223/1 (Estonian)
HGVS:: NC_000009.12:g.100516759C>G, NC_000009.12:g.100516759C>T, NC_000009.11:g.103279041C>G, NC_000009.11:g.103279041C>T, NM_003692.5:c.548C>G, NM_003692.5:c.548C>T, NM_003692.4:c.548C>G, NM_003692.4:c.548C>T, NM_001198812.1:c.770C>G, NM_001198812.1:c.770C>T, NP_003683.2:p.Ala183Gly, NP_003683.2:p.Ala183Val, NP_001185741.1:p.Ala257Gly, NP_001185741.1:p.Ala257Val

Select item 146825475313.

rs1468254753 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:100473586 (GRCh38)
9:103235868 (GRCh37)
Canonical SPDI:: NC_000009.12:100473585:C:A
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview), LOC124902237 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,synonymous_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000009.12:g.100473586C>A, NC_000009.11:g.103235868C>A, NM_003692.5:c.42C>A, NM_003692.4:c.42C>A

Select item 146766326414.

rs1467663264 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:100509128 (GRCh38)
9:103271410 (GRCh37)
Canonical SPDI:: NC_000009.12:100509127:T:A
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.100509128T>A, NC_000009.11:g.103271410T>A, NM_003692.5:c.430T>A, NM_003692.4:c.430T>A, NM_001198812.1:c.652T>A, NP_003683.2:p.Tyr144Asn, NP_001185741.1:p.Tyr218Asn

Select item 146294037415.

rs1462940374 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:100498820 (GRCh38)
9:103261102 (GRCh37)
Canonical SPDI:: NC_000009.12:100498819:T:C
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (GnomAD_exomes)
C=0.000015/4 (TOPMED)
HGVS:: NC_000009.12:g.100498820T>C, NC_000009.11:g.103261102T>C, NM_003692.5:c.252T>C, NM_003692.4:c.252T>C, NM_001198812.1:c.474T>C

Select item 146160375016.

rs1461603750 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:100473575 (GRCh38)
9:103235857 (GRCh37)
Canonical SPDI:: NC_000009.12:100473574:C:G,NC_000009.12:100473574:C:T
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview), LOC124902237 (Varview)
Functional Consequence:: missense_variant,2KB_upstream_variant,intron_variant,coding_sequence_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.100473575C>G, NC_000009.12:g.100473575C>T, NC_000009.11:g.103235857C>G, NC_000009.11:g.103235857C>T, NM_003692.5:c.31C>G, NM_003692.5:c.31C>T, NM_003692.4:c.31C>G, NM_003692.4:c.31C>T, NP_003683.2:p.Arg11Gly, NP_003683.2:p.Arg11Trp

Select item 146046610817.

rs1460466108 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:100473567 (GRCh38)
9:103235849 (GRCh37)
Canonical SPDI:: NC_000009.12:100473566:C:T
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview), LOC124902237 (Varview)
Functional Consequence:: missense_variant,2KB_upstream_variant,intron_variant,coding_sequence_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.100473567C>T, NC_000009.11:g.103235849C>T, NM_003692.5:c.23C>T, NM_003692.4:c.23C>T, NP_003683.2:p.Ala8Val

Select item 145726884418.

rs1457268844 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:100498846 (GRCh38)
9:103261128 (GRCh37)
Canonical SPDI:: NC_000009.12:100498845:A:G
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.100498846A>G, NC_000009.11:g.103261128A>G, NM_003692.5:c.278A>G, NM_003692.4:c.278A>G, NM_001198812.1:c.500A>G, NP_003683.2:p.Asp93Gly, NP_001185741.1:p.Asp167Gly

Select item 145300036219.

rs1453000362 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 9:100498856 (GRCh38)
9:103261138 (GRCh37)
Canonical SPDI:: NC_000009.12:100498855:A:G,NC_000009.12:100498855:A:T
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000028/1 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.100498856A>G, NC_000009.12:g.100498856A>T, NC_000009.11:g.103261138A>G, NC_000009.11:g.103261138A>T, NM_003692.5:c.288A>G, NM_003692.5:c.288A>T, NM_003692.4:c.288A>G, NM_003692.4:c.288A>T, NM_001198812.1:c.510A>G, NM_001198812.1:c.510A>T, NP_003683.2:p.Lys96Asn, NP_001185741.1:p.Lys170Asn

Select item 145078010820.

rs1450780108 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:100473550 (GRCh38)
9:103235832 (GRCh37)
Canonical SPDI:: NC_000009.12:100473549:C:T
Gene:: TMEFF1 (Varview), MSANTD3-TMEFF1 (Varview), LOC124902237 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,coding_sequence_variant,upstream_transcript_variant,synonymous_variant
HGVS:: NC_000009.12:g.100473550C>T, NC_000009.11:g.103235832C>T, NM_003692.5:c.6C>T, NM_003692.4:c.6C>T

<< First< Prev

Page of 17

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Protein

Items: 1 to 20 of 332

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity