SNP Links for Protein (Select 29550921) - SNP

Links from Protein

Items: 1 to 20 of 129

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Select item 14867919911.

rs1486791991 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:30200808 (GRCh38)
16:30212129 (GRCh37)
Canonical SPDI:: NC_000016.10:30200807:C:T
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000016.10:g.30200808C>T, NC_000016.9:g.30212129C>T, NM_177552.4:c.80C>T, NM_177552.3:c.80C>T, NM_003166.3:c.80C>T, NM_003166.2:c.80C>T, NR_037608.1:n.1001C>T, NM_001017387.1:c.80C>T, NM_003166.1:c.80C>T, NP_808220.1:p.Ala27Val

Select item 14829215732.

rs1482921573 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 16:30200819 (GRCh38)
16:30212140 (GRCh37)
Canonical SPDI:: NC_000016.10:30200818:C:G
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
HGVS:: NC_000016.10:g.30200819C>G, NC_000016.9:g.30212140C>G, NM_177552.4:c.91C>G, NM_177552.3:c.91C>G, NM_003166.3:c.91C>G, NM_003166.2:c.91C>G, NR_037608.1:n.1012C>G, NM_001017387.1:c.91C>G, NM_003166.1:c.91C>G, NP_808220.1:p.Leu31Val

Select item 14798630883.

rs1479863088 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:30203845 (GRCh38)
16:30215166 (GRCh37)
Canonical SPDI:: NC_000016.10:30203844:G:A
Gene:: SULT1A3 (Varview), LOC613038 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,synonymous_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00017/2 (ALFA)
A=0.00044/1 (KOREAN)
HGVS:: NC_000016.10:g.30203845G>A, NC_000016.9:g.30215166G>A, NM_177552.4:c.813G>A, NM_177552.3:c.813G>A, NM_003166.3:c.813G>A, NM_003166.2:c.813G>A, NR_037608.1:n.1734G>A, NM_001017387.1:c.813G>A, NM_003166.1:c.813G>A

Select item 14791670234.

rs1479167023 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:30200985 (GRCh38)
16:30212306 (GRCh37)
Canonical SPDI:: NC_000016.10:30200984:C:T
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,non_coding_transcript_variant
HGVS:: NC_000016.10:g.30200985C>T, NC_000016.9:g.30212306C>T, NM_177552.4:c.153C>T, NM_177552.3:c.153C>T, NM_003166.3:c.153C>T, NM_003166.2:c.153C>T, NR_037608.1:n.1074C>T, NM_001017387.1:c.153C>T, NM_003166.1:c.153C>T

Select item 14770675215.

rs1477067521 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:30201091 (GRCh38)
16:30212412 (GRCh37)
Canonical SPDI:: NC_000016.10:30201090:C:T
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.0002/9 (GnomAD_exomes)
HGVS:: NC_000016.10:g.30201091C>T, NC_000016.9:g.30212412C>T, NM_177552.4:c.259C>T, NM_177552.3:c.259C>T, NM_003166.3:c.259C>T, NM_003166.2:c.259C>T, NR_037608.1:n.1180C>T, NM_001017387.1:c.259C>T, NM_003166.1:c.259C>T, NP_808220.1:p.Pro87Ser

Select item 14737815536.

rs1473781553 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:30203537 (GRCh38)
16:30214858 (GRCh37)
Canonical SPDI:: NC_000016.10:30203536:G:A
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,non_coding_transcript_variant
HGVS:: NC_000016.10:g.30203537G>A, NC_000016.9:g.30214858G>A, NM_177552.4:c.627G>A, NM_177552.3:c.627G>A, NM_003166.3:c.627G>A, NM_003166.2:c.627G>A, NR_037608.1:n.1548G>A, NM_001017387.1:c.627G>A, NM_003166.1:c.627G>A

Select item 14733187287.

rs1473318728 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 16:30201239 (GRCh38)
16:30212560 (GRCh37)
Canonical SPDI:: NC_000016.10:30201238:G:T
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.00004/2 (GnomAD_exomes)
HGVS:: NC_000016.10:g.30201239G>T, NC_000016.9:g.30212560G>T, NM_177552.4:c.318G>T, NM_177552.3:c.318G>T, NM_003166.3:c.318G>T, NM_003166.2:c.318G>T, NR_037608.1:n.1239G>T, NM_001017387.1:c.318G>T, NM_003166.1:c.318G>T, NP_808220.1:p.Lys106Asn

Select item 14631224748.

rs1463122474 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 16:30200811 (GRCh38)
16:30212132 (GRCh37)
Canonical SPDI:: NC_000016.10:30200810:T:A,NC_000016.10:30200810:T:G
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.00002/1 (GnomAD_exomes)
G=0.00007/3 (GnomAD)
HGVS:: NC_000016.10:g.30200811T>A, NC_000016.10:g.30200811T>G, NC_000016.9:g.30212132T>A, NC_000016.9:g.30212132T>G, NM_177552.4:c.83T>A, NM_177552.4:c.83T>G, NM_177552.3:c.83T>A, NM_177552.3:c.83T>G, NM_003166.3:c.83T>A, NM_003166.3:c.83T>G, NM_003166.2:c.83T>A, NM_003166.2:c.83T>G, NR_037608.1:n.1004T>A, NR_037608.1:n.1004T>G, NM_001017387.1:c.83T>A, NM_001017387.1:c.83T>G, NM_003166.1:c.83T>A, NM_003166.1:c.83T>G, NP_808220.1:p.Leu28Gln, NP_808220.1:p.Leu28Arg

Select item 14603066699.

rs1460306669 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:30203874 (GRCh38)
16:30215195 (GRCh37)
Canonical SPDI:: NC_000016.10:30203873:C:T
Gene:: SULT1A3 (Varview), LOC613038 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,downstream_transcript_variant,500B_downstream_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00073/13 (ALFA)
T=0.00076/15 (GnomAD)
T=0.00078/5 (1000Genomes)
HGVS:: NC_000016.10:g.30203874C>T, NC_000016.9:g.30215195C>T, NM_177552.4:c.842C>T, NM_177552.3:c.842C>T, NM_003166.3:c.842C>T, NM_003166.2:c.842C>T, NR_037608.1:n.1763C>T, NM_001017387.1:c.842C>T, NM_003166.1:c.842C>T, NP_808220.1:p.Ala281Val

Select item 145959881310.

rs1459598813 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 16:30201273 (GRCh38)
16:30212594 (GRCh37)
Canonical SPDI:: NC_000016.10:30201270:CTCT:CT
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: non_coding_transcript_variant,frameshift_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCT=0./0 (ALFA)
-=0.00002/1 (GnomAD)
-=0.00047/3 (1000Genomes)
HGVS:: NC_000016.10:g.30201271CT[1], NC_000016.9:g.30212592CT[1], NM_177552.4:c.352_353del, NM_177552.3:c.352_353del, NM_003166.3:c.352_353del, NM_003166.2:c.352_353del, NR_037608.1:n.1271CT[1], NM_001017387.1:c.352_353del, NM_003166.1:c.352_353del, NP_808220.1:p.Leu118fs

Select item 145623021211.

rs1456230212 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:30203552 (GRCh38)
16:30214873 (GRCh37)
Canonical SPDI:: NC_000016.10:30203551:C:T
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: non_coding_transcript_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.0001/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.30203552C>T, NC_000016.9:g.30214873C>T, NM_177552.4:c.642C>T, NM_177552.3:c.642C>T, NM_003166.3:c.642C>T, NM_003166.2:c.642C>T, NR_037608.1:n.1563C>T, NM_001017387.1:c.642C>T, NM_003166.1:c.642C>T

Select item 145464243912.

rs1454642439 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:30201197 (GRCh38)
16:30212518 (GRCh37)
Canonical SPDI:: NC_000016.10:30201196:G:A
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: non_coding_transcript_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000016.10:g.30201197G>A, NC_000016.9:g.30212518G>A, NM_177552.4:c.276G>A, NM_177552.3:c.276G>A, NM_003166.3:c.276G>A, NM_003166.2:c.276G>A, NR_037608.1:n.1197G>A, NM_001017387.1:c.276G>A, NM_003166.1:c.276G>A

Select item 145313016313.

rs1453130163 [Homo sapiens]

Variant type:: DEL
Alleles:: CTTGAGGTCAAT>- [Show Flanks]
Chromosome:: 16:30201076 (GRCh38)
16:30212397 (GRCh37)
Canonical SPDI:: NC_000016.10:30201075:CTTGAGGTCAAT:
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: non_coding_transcript_variant,inframe_deletion,coding_sequence_variant
HGVS:: NC_000016.10:g.30201076_30201087del, NC_000016.9:g.30212397_30212408del, NM_177552.4:c.244_255del, NM_177552.3:c.244_255del, NM_003166.3:c.244_255del, NM_003166.2:c.244_255del, NR_037608.1:n.1165_1176del, NM_001017387.1:c.244_255del, NM_003166.1:c.244_255del, NP_808220.1:p.Leu82_Asn85del

Select item 145122277214.

rs1451222772 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 16:30203875 (GRCh38)
16:30215196 (GRCh37)
Canonical SPDI:: NC_000016.10:30203874:GG:G
Gene:: SULT1A3 (Varview), LOC613038 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: coding_sequence_variant,frameshift_variant,non_coding_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
HGVS:: NC_000016.10:g.30203876del, NC_000016.9:g.30215197del, NM_177552.4:c.844del, NM_177552.3:c.844del, NM_003166.3:c.844del, NM_003166.2:c.844del, NR_037608.1:n.1765del, NM_001017387.1:c.844del, NM_003166.1:c.844del, NP_808220.1:p.Glu282fs

Select item 144894358815.

rs1448943588 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:30201229 (GRCh38)
16:30212550 (GRCh37)
Canonical SPDI:: NC_000016.10:30201228:G:A
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00008/1 (ALFA)
A=0.00089/15 (TOMMO)
A=0.00242/6 (KOREAN)
HGVS:: NC_000016.10:g.30201229G>A, NC_000016.9:g.30212550G>A, NM_177552.4:c.308G>A, NM_177552.3:c.308G>A, NM_003166.3:c.308G>A, NM_003166.2:c.308G>A, NR_037608.1:n.1229G>A, NM_001017387.1:c.308G>A, NM_003166.1:c.308G>A, NP_808220.1:p.Arg103Gln

Select item 144714912016.

rs1447149120 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 16:30200754 (GRCh38)
16:30212075 (GRCh37)
Canonical SPDI:: NC_000016.10:30200753:G:A,NC_000016.10:30200753:G:C,NC_000016.10:30200753:G:T
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00008/1 (ALFA)
A=0.00011/8 (GnomAD_exomes)
A=0.00019/13 (GnomAD)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000016.10:g.30200754G>A, NC_000016.10:g.30200754G>C, NC_000016.10:g.30200754G>T, NC_000016.9:g.30212075G>A, NC_000016.9:g.30212075G>C, NC_000016.9:g.30212075G>T, NM_177552.4:c.26G>A, NM_177552.4:c.26G>C, NM_177552.4:c.26G>T, NM_177552.3:c.26G>A, NM_177552.3:c.26G>C, NM_177552.3:c.26G>T, NM_003166.3:c.26G>A, NM_003166.3:c.26G>C, NM_003166.3:c.26G>T, NM_003166.2:c.26G>A, NM_003166.2:c.26G>C, NM_003166.2:c.26G>T, NR_037608.1:n.947G>A, NR_037608.1:n.947G>C, NR_037608.1:n.947G>T, NM_001017387.1:c.26G>A, NM_001017387.1:c.26G>C, NM_001017387.1:c.26G>T, NM_003166.1:c.26G>A, NM_003166.1:c.26G>C, NM_003166.1:c.26G>T, NP_808220.1:p.Arg9His, NP_808220.1:p.Arg9Pro, NP_808220.1:p.Arg9Leu

Select item 143364159717.

rs1433641597 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:30203840 (GRCh38)
16:30215161 (GRCh37)
Canonical SPDI:: NC_000016.10:30203839:G:A
Gene:: SULT1A3 (Varview), LOC613038 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: downstream_transcript_variant,coding_sequence_variant,non_coding_transcript_variant,500B_downstream_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000016.10:g.30203840G>A, NC_000016.9:g.30215161G>A, NM_177552.4:c.808G>A, NM_177552.3:c.808G>A, NM_003166.3:c.808G>A, NM_003166.2:c.808G>A, NR_037608.1:n.1729G>A, NM_001017387.1:c.808G>A, NM_003166.1:c.808G>A, NP_808220.1:p.Val270Met

Select item 143324018718.

rs1433240187 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 16:30203860 (GRCh38)
16:30215181 (GRCh37)
Canonical SPDI:: NC_000016.10:30203859:C:G,NC_000016.10:30203859:C:T
Gene:: SULT1A3 (Varview), LOC613038 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: synonymous_variant,downstream_transcript_variant,coding_sequence_variant,non_coding_transcript_variant,500B_downstream_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000016.10:g.30203860C>G, NC_000016.10:g.30203860C>T, NC_000016.9:g.30215181C>G, NC_000016.9:g.30215181C>T, NM_177552.4:c.828C>G, NM_177552.4:c.828C>T, NM_177552.3:c.828C>G, NM_177552.3:c.828C>T, NM_003166.3:c.828C>G, NM_003166.3:c.828C>T, NM_003166.2:c.828C>G, NM_003166.2:c.828C>T, NR_037608.1:n.1749C>G, NR_037608.1:n.1749C>T, NM_001017387.1:c.828C>G, NM_001017387.1:c.828C>T, NM_003166.1:c.828C>G, NM_003166.1:c.828C>T, NP_808220.1:p.Phe276Leu

Select item 143221127519.

rs1432211275 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 16:30201277 (GRCh38)
16:30212598 (GRCh37)
Canonical SPDI:: NC_000016.10:30201276:T:C,NC_000016.10:30201276:T:G
Gene:: SULT1A3 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00008/1 (ALFA)
HGVS:: NC_000016.10:g.30201277T>C, NC_000016.10:g.30201277T>G, NC_000016.9:g.30212598T>C, NC_000016.9:g.30212598T>G, NM_177552.4:c.356T>C, NM_177552.4:c.356T>G, NM_177552.3:c.356T>C, NM_177552.3:c.356T>G, NM_003166.3:c.356T>C, NM_003166.3:c.356T>G, NM_003166.2:c.356T>C, NM_003166.2:c.356T>G, NR_037608.1:n.1277T>C, NR_037608.1:n.1277T>G, NM_001017387.1:c.356T>C, NM_001017387.1:c.356T>G, NM_003166.1:c.356T>C, NM_003166.1:c.356T>G, NP_808220.1:p.Leu119Ser, NP_808220.1:p.Leu119Trp

Select item 143161591520.

rs1431615915 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 16:30203865 (GRCh38)
16:30215186 (GRCh37)
Canonical SPDI:: NC_000016.10:30203864:C:A,NC_000016.10:30203864:C:G,NC_000016.10:30203864:C:T
Gene:: SULT1A3 (Varview), LOC613038 (Varview), SLX1A-SULT1A3 (Varview)
Functional Consequence:: downstream_transcript_variant,coding_sequence_variant,non_coding_transcript_variant,500B_downstream_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.00013/2 (GnomAD)
T=0.00031/2 (1000Genomes)
HGVS:: NC_000016.10:g.30203865C>A, NC_000016.10:g.30203865C>G, NC_000016.10:g.30203865C>T, NC_000016.9:g.30215186C>A, NC_000016.9:g.30215186C>G, NC_000016.9:g.30215186C>T, NM_177552.4:c.833C>A, NM_177552.4:c.833C>G, NM_177552.4:c.833C>T, NM_177552.3:c.833C>A, NM_177552.3:c.833C>G, NM_177552.3:c.833C>T, NM_003166.3:c.833C>A, NM_003166.3:c.833C>G, NM_003166.3:c.833C>T, NM_003166.2:c.833C>A, NM_003166.2:c.833C>G, NM_003166.2:c.833C>T, NR_037608.1:n.1754C>A, NR_037608.1:n.1754C>G, NR_037608.1:n.1754C>T, NM_001017387.1:c.833C>A, NM_001017387.1:c.833C>G, NM_001017387.1:c.833C>T, NM_003166.1:c.833C>A, NM_003166.1:c.833C>G, NM_003166.1:c.833C>T, NP_808220.1:p.Ala278Glu, NP_808220.1:p.Ala278Gly, NP_808220.1:p.Ala278Val

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