SNP Links for Protein (Select 22091454) - SNP

Links from Protein

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Select item 14815163951.

rs1481516395 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 6:52792879 (GRCh38)
6:52657677 (GRCh37)
Canonical SPDI:: NC_000006.12:52792878:T:G
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000006.12:g.52792879T>G, NC_000006.11:g.52657677T>G, XM_005249034.5:c.523A>C, XM_005249034.4:c.523A>C, XM_005249034.3:c.523A>C, XM_005249034.2:c.523A>C, XM_005249034.1:c.523A>C, NM_145740.5:c.523A>C, NM_145740.4:c.523A>C, NM_145740.3:c.523A>C, NM_001319059.2:c.244A>C, NM_001319059.1:c.244A>C, XP_005249091.1:p.Ile175Leu, NP_665683.1:p.Ile175Leu, NP_001305988.1:p.Ile82Leu

Select item 14788202342.

rs1478820234 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:52799227 (GRCh38)
6:52664025 (GRCh37)
Canonical SPDI:: NC_000006.12:52799226:C:T
Gene:: GSTA1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000024/6 (GnomAD_exomes)
HGVS:: NC_000006.12:g.52799227C>T, NC_000006.11:g.52664025C>T, XM_005249034.5:c.41G>A, XM_005249034.4:c.41G>A, XM_005249034.3:c.41G>A, XM_005249034.2:c.41G>A, XM_005249034.1:c.41G>A, NM_145740.5:c.41G>A, NM_145740.4:c.41G>A, NM_145740.3:c.41G>A, NM_001319059.2:c.-106G>A, NM_001319059.1:c.-106G>A, XP_005249091.1:p.Gly14Asp, NP_665683.1:p.Gly14Asp

Select item 14751651433.

rs1475165143 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 6:52791883 (GRCh38)
6:52656681 (GRCh37)
Canonical SPDI:: NC_000006.12:52791882:T:G
Gene:: GSTA1 (Varview)
Functional Consequence:: downstream_transcript_variant,missense_variant,genic_downstream_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.52791883T>G, NC_000006.11:g.52656681T>G, NM_145740.5:c.644A>C, NM_145740.4:c.644A>C, NM_145740.3:c.644A>C, NM_001319059.2:c.365A>C, NM_001319059.1:c.365A>C, NP_665683.1:p.Glu215Ala, NP_001305988.1:p.Glu122Ala

Select item 14723801264.

rs1472380126 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:52794220 (GRCh38)
6:52659018 (GRCh37)
Canonical SPDI:: NC_000006.12:52794219:G:A
Gene:: GSTA1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.52794220G>A, NC_000006.11:g.52659018G>A, XM_005249034.5:c.319C>T, XM_005249034.4:c.319C>T, XM_005249034.3:c.319C>T, XM_005249034.2:c.319C>T, XM_005249034.1:c.319C>T, NM_145740.5:c.319C>T, NM_145740.4:c.319C>T, NM_145740.3:c.319C>T, NM_001319059.2:c.40C>T, NM_001319059.1:c.40C>T, XP_005249091.1:p.Leu107Phe, NP_665683.1:p.Leu107Phe, NP_001305988.1:p.Leu14Phe

Select item 14650639915.

rs1465063991 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:52792930 (GRCh38)
6:52657728 (GRCh37)
Canonical SPDI:: NC_000006.12:52792929:T:C
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: C=0.000004/1 (GnomAD_exomes)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.52792930T>C, NC_000006.11:g.52657728T>C, XM_005249034.5:c.472A>G, XM_005249034.4:c.472A>G, XM_005249034.3:c.472A>G, XM_005249034.2:c.472A>G, XM_005249034.1:c.472A>G, NM_145740.5:c.472A>G, NM_145740.4:c.472A>G, NM_145740.3:c.472A>G, NM_001319059.2:c.193A>G, NM_001319059.1:c.193A>G, XP_005249091.1:p.Ile158Val, NP_665683.1:p.Ile158Val, NP_001305988.1:p.Ile65Val

Select item 14624462656.

rs1462446265 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:52796285 (GRCh38)
6:52661083 (GRCh37)
Canonical SPDI:: NC_000006.12:52796284:T:C
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.52796285T>C, NC_000006.11:g.52661083T>C, XM_005249034.5:c.169A>G, XM_005249034.4:c.169A>G, XM_005249034.3:c.169A>G, XM_005249034.2:c.169A>G, XM_005249034.1:c.169A>G, NM_145740.5:c.169A>G, NM_145740.4:c.169A>G, NM_145740.3:c.169A>G, XP_005249091.1:p.Met57Val, NP_665683.1:p.Met57Val

Select item 14613088637.

rs1461308863 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:52794234 (GRCh38)
6:52659032 (GRCh37)
Canonical SPDI:: NC_000006.12:52794233:A:G
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000006.12:g.52794234A>G, NC_000006.11:g.52659032A>G, XM_005249034.5:c.305T>C, XM_005249034.4:c.305T>C, XM_005249034.3:c.305T>C, XM_005249034.2:c.305T>C, XM_005249034.1:c.305T>C, NM_145740.5:c.305T>C, NM_145740.4:c.305T>C, NM_145740.3:c.305T>C, NM_001319059.2:c.26T>C, NM_001319059.1:c.26T>C, XP_005249091.1:p.Leu102Ser, NP_665683.1:p.Leu102Ser, NP_001305988.1:p.Leu9Ser

Select item 14589360418.

rs1458936041 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:52799255 (GRCh38)
6:52664053 (GRCh37)
Canonical SPDI:: NC_000006.12:52799254:G:A
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000224/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.52799255G>A, NC_000006.11:g.52664053G>A, XM_005249034.5:c.13C>T, XM_005249034.4:c.13C>T, XM_005249034.3:c.13C>T, XM_005249034.2:c.13C>T, XM_005249034.1:c.13C>T, NM_145740.5:c.13C>T, NM_145740.4:c.13C>T, NM_145740.3:c.13C>T, NM_001319059.2:c.-134C>T, NM_001319059.1:c.-134C>T, XP_005249091.1:p.Pro5Ser, NP_665683.1:p.Pro5Ser

Select item 14570820599.

rs1457082059 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 6:52794262 (GRCh38)
6:52659060 (GRCh37)
Canonical SPDI:: NC_000006.12:52794261:C:G,NC_000006.12:52794261:C:T
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.52794262C>G, NC_000006.12:g.52794262C>T, NC_000006.11:g.52659060C>G, NC_000006.11:g.52659060C>T, XM_005249034.5:c.277G>C, XM_005249034.5:c.277G>A, XM_005249034.4:c.277G>C, XM_005249034.4:c.277G>A, XM_005249034.3:c.277G>C, XM_005249034.3:c.277G>A, XM_005249034.2:c.277G>C, XM_005249034.2:c.277G>A, XM_005249034.1:c.277G>C, XM_005249034.1:c.277G>A, NM_145740.5:c.277G>C, NM_145740.5:c.277G>A, NM_145740.4:c.277G>C, NM_145740.4:c.277G>A, NM_145740.3:c.277G>C, NM_145740.3:c.277G>A, NM_001319059.2:c.-3G>C, NM_001319059.2:c.-3G>A, NM_001319059.1:c.-3G>C, NM_001319059.1:c.-3G>A, XP_005249091.1:p.Asp93His, XP_005249091.1:p.Asp93Asn, NP_665683.1:p.Asp93His, NP_665683.1:p.Asp93Asn

Select item 144553491910.

rs1445534919 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 6:52799217 (GRCh38)
6:52664015 (GRCh37)
Canonical SPDI:: NC_000006.12:52799216:C:A,NC_000006.12:52799216:C:T
Gene:: GSTA1 (Varview)
Functional Consequence:: missense_variant,synonymous_variant,5_prime_UTR_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0.000048/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.52799217C>A, NC_000006.12:g.52799217C>T, NC_000006.11:g.52664015C>A, NC_000006.11:g.52664015C>T, XM_005249034.5:c.51G>T, XM_005249034.5:c.51G>A, XM_005249034.4:c.51G>T, XM_005249034.4:c.51G>A, XM_005249034.3:c.51G>T, XM_005249034.3:c.51G>A, XM_005249034.2:c.51G>T, XM_005249034.2:c.51G>A, XM_005249034.1:c.51G>T, XM_005249034.1:c.51G>A, NM_145740.5:c.51G>T, NM_145740.5:c.51G>A, NM_145740.4:c.51G>T, NM_145740.4:c.51G>A, NM_145740.3:c.51G>T, NM_145740.3:c.51G>A, NM_001319059.2:c.-96G>T, NM_001319059.2:c.-96G>A, NM_001319059.1:c.-96G>T, NM_001319059.1:c.-96G>A, XP_005249091.1:p.Glu17Asp, NP_665683.1:p.Glu17Asp

Select item 144434286211.

rs1444342862 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:52794163 (GRCh38)
6:52658961 (GRCh37)
Canonical SPDI:: NC_000006.12:52794162:C:T
Gene:: GSTA1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000006.12:g.52794163C>T, NC_000006.11:g.52658961C>T, XM_005249034.5:c.376G>A, XM_005249034.4:c.376G>A, XM_005249034.3:c.376G>A, XM_005249034.2:c.376G>A, XM_005249034.1:c.376G>A, NM_145740.5:c.376G>A, NM_145740.4:c.376G>A, NM_145740.3:c.376G>A, NM_001319059.2:c.97G>A, NM_001319059.1:c.97G>A, XP_005249091.1:p.Glu126Lys, NP_665683.1:p.Glu126Lys, NP_001305988.1:p.Glu33Lys

Select item 144035204912.

rs1440352049 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>- [Show Flanks]
Chromosome:: 6:52797599 (GRCh38)
6:52662397 (GRCh37)
Canonical SPDI:: NC_000006.12:52797597:TGT:T
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,frameshift_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.52797599_52797600del, NC_000006.11:g.52662397_52662398del, XM_005249034.5:c.126_127del, XM_005249034.4:c.126_127del, XM_005249034.3:c.126_127del, XM_005249034.2:c.126_127del, XM_005249034.1:c.126_127del, NM_145740.5:c.126_127del, NM_145740.4:c.126_127del, NM_145740.3:c.126_127del, NM_001319059.2:c.-21_-20del, NM_001319059.1:c.-21_-20del, XP_005249091.1:p.Asp42fs, NP_665683.1:p.Asp42fs

Select item 143996534313.

rs1439965343 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:52797616 (GRCh38)
6:52662414 (GRCh37)
Canonical SPDI:: NC_000006.12:52797615:A:T
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,5_prime_UTR_variant
Validated:: by frequency
MAF:: T=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000006.12:g.52797616A>T, NC_000006.11:g.52662414A>T, XM_005249034.5:c.109T>A, XM_005249034.4:c.109T>A, XM_005249034.3:c.109T>A, XM_005249034.2:c.109T>A, XM_005249034.1:c.109T>A, NM_145740.5:c.109T>A, NM_145740.4:c.109T>A, NM_145740.3:c.109T>A, NM_001319059.2:c.-38T>A, NM_001319059.1:c.-38T>A, XP_005249091.1:p.Ser37Thr, NP_665683.1:p.Ser37Thr

Select item 143209656314.

rs1432096563 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:52792983 (GRCh38)
6:52657781 (GRCh37)
Canonical SPDI:: NC_000006.12:52792982:A:G
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.52792983A>G, NC_000006.11:g.52657781A>G, XM_005249034.5:c.419T>C, XM_005249034.4:c.419T>C, XM_005249034.3:c.419T>C, XM_005249034.2:c.419T>C, XM_005249034.1:c.419T>C, NM_145740.5:c.419T>C, NM_145740.4:c.419T>C, NM_145740.3:c.419T>C, NM_001319059.2:c.140T>C, NM_001319059.1:c.140T>C, XP_005249091.1:p.Leu140Ser, NP_665683.1:p.Leu140Ser, NP_001305988.1:p.Leu47Ser

Select item 142818277215.

rs1428182772 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 6:52796232 (GRCh38)
6:52661030 (GRCh37)
Canonical SPDI:: NC_000006.12:52796231:G:A,NC_000006.12:52796231:G:T
Gene:: GSTA1 (Varview)
Functional Consequence:: stop_gained,coding_sequence_variant,synonymous_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.52796232G>A, NC_000006.12:g.52796232G>T, NC_000006.11:g.52661030G>A, NC_000006.11:g.52661030G>T, XM_005249034.5:c.222C>T, XM_005249034.5:c.222C>A, XM_005249034.4:c.222C>T, XM_005249034.4:c.222C>A, XM_005249034.3:c.222C>T, XM_005249034.3:c.222C>A, XM_005249034.2:c.222C>T, XM_005249034.2:c.222C>A, XM_005249034.1:c.222C>T, XM_005249034.1:c.222C>A, NM_145740.5:c.222C>T, NM_145740.5:c.222C>A, NM_145740.4:c.222C>T, NM_145740.4:c.222C>A, NM_145740.3:c.222C>T, NM_145740.3:c.222C>A, XP_005249091.1:p.Tyr74Ter, NP_665683.1:p.Tyr74Ter

Select item 142805875016.

rs1428058750 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:52794158 (GRCh38)
6:52658956 (GRCh37)
Canonical SPDI:: NC_000006.12:52794157:T:A
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: A=0.000007/1 (GnomAD)
A=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000006.12:g.52794158T>A, NC_000006.11:g.52658956T>A, XM_005249034.5:c.381A>T, XM_005249034.4:c.381A>T, XM_005249034.3:c.381A>T, XM_005249034.2:c.381A>T, XM_005249034.1:c.381A>T, NM_145740.5:c.381A>T, NM_145740.4:c.381A>T, NM_145740.3:c.381A>T, NM_001319059.2:c.102A>T, NM_001319059.1:c.102A>T, XP_005249091.1:p.Lys127Asn, NP_665683.1:p.Lys127Asn, NP_001305988.1:p.Lys34Asn

Select item 142627651517.

rs1426276515 [Homo sapiens]

Variant type:: DEL
Alleles:: GAGGGAAGC>- [Show Flanks]
Chromosome:: 6:52792864 (GRCh38)
6:52657662 (GRCh37)
Canonical SPDI:: NC_000006.12:52792863:GAGGGAAGC:
Gene:: GSTA1 (Varview)
Functional Consequence:: inframe_indel,coding_sequence_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.52792864_52792872del, NC_000006.11:g.52657662_52657670del, XM_005249034.5:c.530_538del, XM_005249034.4:c.530_538del, XM_005249034.3:c.530_538del, XM_005249034.2:c.530_538del, XM_005249034.1:c.530_538del, NM_145740.5:c.530_538del, NM_145740.4:c.530_538del, NM_145740.3:c.530_538del, NM_001319059.2:c.251_259del, NM_001319059.1:c.251_259del, XP_005249091.1:p.Ser177_Leu180delinsMet, NP_665683.1:p.Ser177_Leu180delinsMet, NP_001305988.1:p.Ser84_Leu87delinsMet

Select item 142375976918.

rs1423759769 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:52794143 (GRCh38)
6:52658941 (GRCh37)
Canonical SPDI:: NC_000006.12:52794142:G:A
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.52794143G>A, NC_000006.11:g.52658941G>A, XM_005249034.5:c.396C>T, XM_005249034.4:c.396C>T, XM_005249034.3:c.396C>T, XM_005249034.2:c.396C>T, XM_005249034.1:c.396C>T, NM_145740.5:c.396C>T, NM_145740.4:c.396C>T, NM_145740.3:c.396C>T, NM_001319059.2:c.117C>T, NM_001319059.1:c.117C>T

Select item 142254657719.

rs1422546577 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:52792980 (GRCh38)
6:52657778 (GRCh37)
Canonical SPDI:: NC_000006.12:52792979:T:C
Gene:: GSTA1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.52792980T>C, NC_000006.11:g.52657778T>C, XM_005249034.5:c.422A>G, XM_005249034.4:c.422A>G, XM_005249034.3:c.422A>G, XM_005249034.2:c.422A>G, XM_005249034.1:c.422A>G, NM_145740.5:c.422A>G, NM_145740.4:c.422A>G, NM_145740.3:c.422A>G, NM_001319059.2:c.143A>G, NM_001319059.1:c.143A>G, XP_005249091.1:p.Lys141Arg, NP_665683.1:p.Lys141Arg, NP_001305988.1:p.Lys48Arg

Select item 141213294420.

rs1412132944 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:52791911 (GRCh38)
6:52656709 (GRCh37)
Canonical SPDI:: NC_000006.12:52791910:G:T
Gene:: GSTA1 (Varview)
Functional Consequence:: downstream_transcript_variant,missense_variant,genic_downstream_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.52791911G>T, NC_000006.11:g.52656709G>T, NM_145740.5:c.616C>A, NM_145740.4:c.616C>A, NM_145740.3:c.616C>A, NM_001319059.2:c.337C>A, NM_001319059.1:c.337C>A, NP_665683.1:p.Pro206Thr, NP_001305988.1:p.Pro113Thr

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