SNP Links for Nucleotide (Select 999809153) - SNP

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Links from Nucleotide

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Select item 14908341371.

rs1490834137 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:29677763 (GRCh38)
15:29969967 (GRCh37)
Canonical SPDI:: NC_000015.10:29677762:G:C
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000015.10:g.29677763G>C, NC_000015.9:g.29969967G>C, NW_011332701.1:g.1849403G>C, NT_187660.1:g.1961887G>C, NR_135221.1:n.1180G>C

Select item 14908230382.

rs1490823038 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:29675169 (GRCh38)
15:29967373 (GRCh37)
Canonical SPDI:: NC_000015.10:29675168:C:T
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.29675169C>T, NC_000015.9:g.29967373C>T, NW_011332701.1:g.1846809C>T, NT_187660.1:g.1959293C>T, NM_001387216.1:c.-140G>A, NM_001387215.1:c.-140G>A, NM_001387217.1:c.-140G>A, NR_135221.1:n.235C>T

Select item 14900552093.

rs1490055209 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:29678151 (GRCh38)
15:29970355 (GRCh37)
Canonical SPDI:: NC_000015.10:29678150:C:T
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.29678151C>T, NC_000015.9:g.29970355C>T, NW_011332701.1:g.1849791C>T, NT_187660.1:g.1962275C>T, NR_135221.1:n.1568C>T

Select item 14874357604.

rs1487435760 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 15:29674974 (GRCh38)
15:29967178 (GRCh37)
Canonical SPDI:: NC_000015.10:29674973:C:G,NC_000015.10:29674973:C:T
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00016/1 (1000Genomes)
HGVS:: NC_000015.10:g.29674974C>G, NC_000015.10:g.29674974C>T, NC_000015.9:g.29967178C>G, NC_000015.9:g.29967178C>T, NW_011332701.1:g.1846614C>G, NW_011332701.1:g.1846614C>T, NT_187660.1:g.1959098C>G, NT_187660.1:g.1959098C>T, NR_135221.1:n.40C>G, NR_135221.1:n.40C>T

Select item 14860432265.

rs1486043226 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 15:29674985 (GRCh38)
15:29967189 (GRCh37)
Canonical SPDI:: NC_000015.10:29674984:G:C,NC_000015.10:29674984:G:T
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.29674985G>C, NC_000015.10:g.29674985G>T, NC_000015.9:g.29967189G>C, NC_000015.9:g.29967189G>T, NW_011332701.1:g.1846625G>C, NW_011332701.1:g.1846625G>T, NT_187660.1:g.1959109G>C, NT_187660.1:g.1959109G>T, NR_135221.1:n.51G>C, NR_135221.1:n.51G>T

Select item 14856139226.

rs1485613922 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:29675190 (GRCh38)
15:29967394 (GRCh37)
Canonical SPDI:: NC_000015.10:29675189:G:C
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.29675190G>C, NC_000015.9:g.29967394G>C, NW_011332701.1:g.1846830G>C, NT_187660.1:g.1959314G>C, NM_001387216.1:c.-161C>G, NM_001387215.1:c.-161C>G, NM_001387217.1:c.-161C>G, NR_135221.1:n.256G>C

Select item 14850603467.

rs1485060346 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:29675447 (GRCh38)
15:29967651 (GRCh37)
Canonical SPDI:: NC_000015.10:29675446:G:A
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.29675447G>A, NC_000015.9:g.29967651G>A, NW_011332701.1:g.1847087G>A, NT_187660.1:g.1959571G>A, NR_135221.1:n.513G>A

Select item 14834831308.

rs1483483130 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:29679014 (GRCh38)
15:29971218 (GRCh37)
Canonical SPDI:: NC_000015.10:29679013:C:G
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.29679014C>G, NC_000015.9:g.29971218C>G, NW_011332701.1:g.1850654C>G, NT_187660.1:g.1963138C>G, NR_135221.1:n.2431C>G

Select item 14824024449.

rs1482402444 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:29675498 (GRCh38)
15:29967702 (GRCh37)
Canonical SPDI:: NC_000015.10:29675497:A:G
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.29675498A>G, NC_000015.9:g.29967702A>G, NW_011332701.1:g.1847138A>G, NT_187660.1:g.1959622A>G, NR_135221.1:n.564A>G

Select item 148183645710.

rs1481836457 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:29677472 (GRCh38)
15:29969676 (GRCh37)
Canonical SPDI:: NC_000015.10:29677471:A:G
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.29677472A>G, NC_000015.9:g.29969676A>G, NW_011332701.1:g.1849112A>G, NT_187660.1:g.1961596A>G, NR_135221.1:n.889A>G

Select item 148133915511.

rs1481339155 [Homo sapiens]

Variant type:: DELINS
Alleles:: AGG>- [Show Flanks]
Chromosome:: 15:29677851 (GRCh38)
15:29970055 (GRCh37)
Canonical SPDI:: NC_000015.10:29677847:AGGAGG:AGG
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: AGGAGG=0./0 (ALFA)
HGVS:: NC_000015.10:g.29677848AGG[1], NC_000015.9:g.29970052AGG[1], NW_011332701.1:g.1849488AGG[1], NT_187660.1:g.1961972AGG[1], NR_135221.1:n.1265AGG[1]

Select item 148066489712.

rs1480664897 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:29677838 (GRCh38)
15:29970042 (GRCh37)
Canonical SPDI:: NC_000015.10:29677837:T:C
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.29677838T>C, NC_000015.9:g.29970042T>C, NW_011332701.1:g.1849478T>C, NT_187660.1:g.1961962T>C, NR_135221.1:n.1255T>C

Select item 148016593713.

rs1480165937 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 15:29677313 (GRCh38)
15:29969517 (GRCh37)
Canonical SPDI:: NC_000015.10:29677312:G:A,NC_000015.10:29677312:G:C
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000071/1 (TOMMO)
HGVS:: NC_000015.10:g.29677313G>A, NC_000015.10:g.29677313G>C, NC_000015.9:g.29969517G>A, NC_000015.9:g.29969517G>C, NW_011332701.1:g.1848953G>A, NW_011332701.1:g.1848953G>C, NT_187660.1:g.1961437G>A, NT_187660.1:g.1961437G>C, NR_135221.1:n.730G>A, NR_135221.1:n.730G>C

Select item 147988291014.

rs1479882910 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:29678347 (GRCh38)
15:29970551 (GRCh37)
Canonical SPDI:: NC_000015.10:29678346:C:T
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.29678347C>T, NC_000015.9:g.29970551C>T, NW_011332701.1:g.1849987C>T, NT_187660.1:g.1962471C>T, NR_135221.1:n.1764C>T

Select item 147554860515.

rs1475548605 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:29675046 (GRCh38)
15:29967250 (GRCh37)
Canonical SPDI:: NC_000015.10:29675045:C:T
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000345/1 (KOREAN)
HGVS:: NC_000015.10:g.29675046C>T, NC_000015.9:g.29967250C>T, NW_011332701.1:g.1846686C>T, NT_187660.1:g.1959170C>T, NR_135221.1:n.112C>T

Select item 147368435516.

rs1473684355 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:29674982 (GRCh38)
15:29967186 (GRCh37)
Canonical SPDI:: NC_000015.10:29674981:C:G
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00004/1 (TOMMO)
HGVS:: NC_000015.10:g.29674982C>G, NC_000015.9:g.29967186C>G, NW_011332701.1:g.1846622C>G, NT_187660.1:g.1959106C>G, NR_135221.1:n.48C>G

Select item 147270219017.

rs1472702190 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:29675427 (GRCh38)
15:29967631 (GRCh37)
Canonical SPDI:: NC_000015.10:29675426:A:G
Gene:: FAM189A1 (Varview), LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.29675427A>G, NC_000015.9:g.29967631A>G, NW_011332701.1:g.1847067A>G, NT_187660.1:g.1959551A>G, NR_135221.1:n.493A>G

Select item 146951568918.

rs1469515689 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:29677421 (GRCh38)
15:29969625 (GRCh37)
Canonical SPDI:: NC_000015.10:29677420:T:C
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
HGVS:: NC_000015.10:g.29677421T>C, NC_000015.9:g.29969625T>C, NW_011332701.1:g.1849061T>C, NT_187660.1:g.1961545T>C, NR_135221.1:n.838T>C

Select item 146607600919.

rs1466076009 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 15:29678741 (GRCh38)
15:29970945 (GRCh37)
Canonical SPDI:: NC_000015.10:29678740:T:G
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.29678741T>G, NC_000015.9:g.29970945T>G, NW_011332701.1:g.1850381T>G, NT_187660.1:g.1962865T>G, NR_135221.1:n.2158T>G

Select item 146426441820.

rs1464264418 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:29677810 (GRCh38)
15:29970014 (GRCh37)
Canonical SPDI:: NC_000015.10:29677809:G:A
Gene:: LOC100130111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.29677810G>A, NC_000015.9:g.29970014G>A, NW_011332701.1:g.1849450G>A, NT_187660.1:g.1961934G>A, NR_135221.1:n.1227G>A