SNP Links for Nucleotide (Select 961658139) - SNP

Links from Nucleotide

Items: 1 to 20 of 100

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Select item 14857184571.

rs1485718457 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 5:17444201 (GRCh38)
5:17444310 (GRCh37)
Canonical SPDI:: NC_000005.10:17444200:C:A
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.17444201C>A, NC_000005.9:g.17444310C>A, NR_134270.1:n.192C>A, NR_134271.1:n.192C>A

Select item 14840784282.

rs1484078428 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 5:17445636 (GRCh38)
5:17445745 (GRCh37)
Canonical SPDI:: NC_000005.10:17445635:A:C,NC_000005.10:17445635:A:G
Gene:: LINC02218 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.17445636A>C, NC_000005.10:g.17445636A>G, NC_000005.9:g.17445745A>C, NC_000005.9:g.17445745A>G, NR_134271.1:n.235A>C, NR_134271.1:n.235A>G

Select item 14727797653.

rs1472779765 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 5:17444190 (GRCh38)
5:17444299 (GRCh37)
Canonical SPDI:: NC_000005.10:17444189:T:A,NC_000005.10:17444189:T:G
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000005.10:g.17444190T>A, NC_000005.10:g.17444190T>G, NC_000005.9:g.17444299T>A, NC_000005.9:g.17444299T>G, NR_134270.1:n.181T>A, NR_134270.1:n.181T>G, NR_134271.1:n.181T>A, NR_134271.1:n.181T>G

Select item 14577423384.

rs1457742338 [Homo sapiens]

Variant type:: DELINS
Alleles:: CATCTATGAG>- [Show Flanks]
Chromosome:: 5:17445850 (GRCh38)
5:17445959 (GRCh37)
Canonical SPDI:: NC_000005.10:17445847:AGCATCTATGAG:AG
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AG=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000021/3 (GnomAD)
HGVS:: NC_000005.10:g.17445850_17445859del, NC_000005.9:g.17445959_17445968del, NR_134271.1:n.449_458del

Select item 14546001245.

rs1454600124 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 5:17444046 (GRCh38)
5:17444155 (GRCh37)
Canonical SPDI:: NC_000005.10:17444045:A:G
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000023/6 (TOPMED)
G=0.000036/5 (GnomAD)
HGVS:: NC_000005.10:g.17444046A>G, NC_000005.9:g.17444155A>G, NR_134270.1:n.37A>G, NR_134271.1:n.37A>G

Select item 14528026626.

rs1452802662 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 5:17445707 (GRCh38)
5:17445816 (GRCh37)
Canonical SPDI:: NC_000005.10:17445706:G:C
Gene:: LINC02218 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.17445707G>C, NC_000005.9:g.17445816G>C, NR_134271.1:n.306G>C

Select item 14443410137.

rs1444341013 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 5:17444015 (GRCh38)
5:17444124 (GRCh37)
Canonical SPDI:: NC_000005.10:17444014:A:G
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000312/2 (1000Genomes)
HGVS:: NC_000005.10:g.17444015A>G, NC_000005.9:g.17444124A>G, NR_134270.1:n.6A>G, NR_134271.1:n.6A>G

Select item 14423393428.

rs1442339342 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:17444068 (GRCh38)
5:17444177 (GRCh37)
Canonical SPDI:: NC_000005.10:17444067:G:A
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000005.10:g.17444068G>A, NC_000005.9:g.17444177G>A, NR_134270.1:n.59G>A, NR_134271.1:n.59G>A

Select item 14380674239.

rs1438067423 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:17444173 (GRCh38)
5:17444282 (GRCh37)
Canonical SPDI:: NC_000005.10:17444172:T:C
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.17444173T>C, NC_000005.9:g.17444282T>C, NR_134270.1:n.164T>C, NR_134271.1:n.164T>C

Select item 142462947310.

rs1424629473 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 5:17444031 (GRCh38)
5:17444140 (GRCh37)
Canonical SPDI:: NC_000005.10:17444030:A:G,NC_000005.10:17444030:A:T
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000005.10:g.17444031A>G, NC_000005.10:g.17444031A>T, NC_000005.9:g.17444140A>G, NC_000005.9:g.17444140A>T, NR_134270.1:n.22A>G, NR_134270.1:n.22A>T, NR_134271.1:n.22A>G, NR_134271.1:n.22A>T

Select item 142085745711.

rs1420857457 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:17445688 (GRCh38)
5:17445797 (GRCh37)
Canonical SPDI:: NC_000005.10:17445687:G:A
Gene:: LINC02218 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.17445688G>A, NC_000005.9:g.17445797G>A, NR_134271.1:n.287G>A

Select item 141710857912.

rs1417108579 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 5:17445851 (GRCh38)
5:17445960 (GRCh37)
Canonical SPDI:: NC_000005.10:17445850:A:G
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000005.10:g.17445851A>G, NC_000005.9:g.17445960A>G, NR_134271.1:n.450A>G

Select item 141377135713.

rs1413771357 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:17444021 (GRCh38)
5:17444130 (GRCh37)
Canonical SPDI:: NC_000005.10:17444020:G:A
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000034/9 (TOPMED)
A=0.000106/2 (TOMMO)
HGVS:: NC_000005.10:g.17444021G>A, NC_000005.9:g.17444130G>A, NR_134270.1:n.12G>A, NR_134271.1:n.12G>A

Select item 141257769414.

rs1412577694 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 5:17445689 (GRCh38)
5:17445798 (GRCh37)
Canonical SPDI:: NC_000005.10:17445688:C:A,NC_000005.10:17445688:C:T
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.17445689C>A, NC_000005.10:g.17445689C>T, NC_000005.9:g.17445798C>A, NC_000005.9:g.17445798C>T, NR_134271.1:n.288C>A, NR_134271.1:n.288C>T

Select item 139364383215.

rs1393643832 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 5:17445678 (GRCh38)
5:17445787 (GRCh37)
Canonical SPDI:: NC_000005.10:17445677:G:C
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0./0 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000005.10:g.17445678G>C, NC_000005.9:g.17445787G>C, NR_134271.1:n.277G>C

Select item 138553255816.

rs1385532558 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 5:17445738 (GRCh38)
5:17445847 (GRCh37)
Canonical SPDI:: NC_000005.10:17445737:G:A,NC_000005.10:17445737:G:T
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000005.10:g.17445738G>A, NC_000005.10:g.17445738G>T, NC_000005.9:g.17445847G>A, NC_000005.9:g.17445847G>T, NR_134271.1:n.337G>A, NR_134271.1:n.337G>T

Select item 138129606217.

rs1381296062 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 5:17445816 (GRCh38)
5:17445925 (GRCh37)
Canonical SPDI:: NC_000005.10:17445815:CCC:CC
Gene:: LINC02218 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.17445818del, NC_000005.9:g.17445927del, NR_134271.1:n.417del

Select item 137663668718.

rs1376636687 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 5:17444219 (GRCh38)
5:17444328 (GRCh37)
Canonical SPDI:: NC_000005.10:17444218:A:T
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.17444219A>T, NC_000005.9:g.17444328A>T, NR_134270.1:n.210A>T, NR_134271.1:n.210A>T

Select item 137608643019.

rs1376086430 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 5:17444172 (GRCh38)
5:17444281 (GRCh37)
Canonical SPDI:: NC_000005.10:17444169:ATAT:AT
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: ATAT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.17444170AT[1], NC_000005.9:g.17444279AT[1], NR_134270.1:n.161AT[1], NR_134271.1:n.161AT[1]

Select item 137526230820.

rs1375262308 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:17444144 (GRCh38)
5:17444253 (GRCh37)
Canonical SPDI:: NC_000005.10:17444143:T:C
Gene:: LINC02218 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.17444144T>C, NC_000005.9:g.17444253T>C, NR_134270.1:n.135T>C, NR_134271.1:n.135T>C

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