SNP Links for Nucleotide (Select 926234473) - SNP

Links from Nucleotide

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Select item 14915340401.

rs1491534040 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 16:18803060 (GRCh38)
16:18814383 (GRCh37)
Canonical SPDI:: NC_000016.10:18803060::C
Gene:: ARL6IP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000016.10:g.18803060_18803061insC, NC_000016.9:g.18814382_18814383insC, NG_042860.1:g.3618_3619insG

Select item 14910213132.

rs1491021313 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 16:18803253 (GRCh38)
16:18814575 (GRCh37)
Canonical SPDI:: NC_000016.10:18803251:TAT:T
Gene:: ARL6IP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.18803253_18803254del, NC_000016.9:g.18814575_18814576del, NG_042860.1:g.3426_3427del

Select item 14909664583.

rs1490966458 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:18791570 (GRCh38)
16:18802892 (GRCh37)
Canonical SPDI:: NC_000016.10:18791569:T:C
Gene:: RPS15A (Varview), ARL6IP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.18791570T>C, NC_000016.9:g.18802892T>C, NG_042860.1:g.15109A>G

Select item 14908980384.

rs1490898038 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:18805801 (GRCh38)
16:18817123 (GRCh37)
Canonical SPDI:: NC_000016.10:18805800:T:C
Gene:: SMG1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000016.10:g.18805801T>C, NC_000016.9:g.18817123T>C, NG_042860.1:g.878A>G, XM_005255183.5:c.*3768A>G, XM_005255183.4:c.*3768A>G, XM_005255183.3:c.*3768A>G, XM_005255183.2:c.*3768A>G, XM_005255183.1:c.*3768A>G, NM_015092.5:c.*3768A>G, NM_015092.4:c.*3768A>G, XM_005255184.5:c.*3768A>G, XM_005255184.4:c.*3768A>G, XM_005255184.3:c.*3768A>G, XM_005255184.2:c.*3768A>G, XM_005255184.1:c.*3768A>G, XM_005255182.4:c.*3768A>G, XM_005255182.3:c.*3768A>G, XM_005255182.2:c.*3768A>G, XM_005255182.1:c.*3768A>G, XM_011545769.4:c.*3768A>G, XM_011545769.3:c.*3768A>G, XM_011545769.2:c.*3768A>G, XM_011545769.1:c.*3768A>G, XM_017023066.3:c.*3768A>G, XM_017023066.2:c.*3768A>G, XM_017023066.1:c.*3768A>G, XM_024450199.2:c.*3768A>G, XM_024450199.1:c.*3768A>G, XM_017023067.2:c.*3768A>G, XM_017023067.1:c.*3768A>G, XM_011545770.2:c.*3768A>G, XM_011545770.1:c.*3768A>G, XM_047433792.1:c.*3768A>G, XM_047433793.1:c.*3768A>G, XM_047433796.1:c.*3768A>G, XM_047433794.1:c.*3768A>G, XM_047433795.1:c.*3768A>G

Select item 14907408225.

rs1490740822 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:18800987 (GRCh38)
16:18812309 (GRCh37)
Canonical SPDI:: NC_000016.10:18800986:C:T
Gene:: ARL6IP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.18800987C>T, NC_000016.9:g.18812309C>T, NG_042860.1:g.5692G>A

Select item 14904766266.

rs1490476626 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:18792143 (GRCh38)
16:18803465 (GRCh37)
Canonical SPDI:: NC_000016.10:18792142:T:C
Gene:: RPS15A (Varview), ARL6IP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,3_prime_UTR_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.18792143T>C, NC_000016.9:g.18803465T>C, NG_042860.1:g.14536A>G, NM_015161.3:c.*1109A>G, NM_015161.2:c.*1109A>G, NM_015161.1:c.*1109A>G, NM_001313858.1:c.*1109A>G

Select item 14901730057.

rs1490173005 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:18790391 (GRCh38)
16:18801713 (GRCh37)
Canonical SPDI:: NC_000016.10:18790390:T:C
Gene:: RPS15A (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.18790391T>C, NC_000016.9:g.18801713T>C, NG_042860.1:g.16288A>G

Select item 14901475348.

rs1490147534 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:18791109 (GRCh38)
16:18802431 (GRCh37)
Canonical SPDI:: NC_000016.10:18791108:C:T
Gene:: RPS15A (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.18791109C>T, NC_000016.9:g.18802431C>T, NG_042860.1:g.15570G>A

Select item 14901252689.

rs1490125268 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:18789899 (GRCh38)
16:18801221 (GRCh37)
Canonical SPDI:: NC_000016.10:18789898:G:A
Gene:: RPS15A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.18789899G>A, NC_000016.9:g.18801221G>A, NG_042860.1:g.16780C>T

Select item 148992174710.

rs1489921747 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 16:18801762 (GRCh38)
16:18813084 (GRCh37)
Canonical SPDI:: NC_000016.10:18801761:A:C,NC_000016.10:18801761:A:T
Gene:: ARL6IP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.18801762A>C, NC_000016.10:g.18801762A>T, NC_000016.9:g.18813084A>C, NC_000016.9:g.18813084A>T, NG_042860.1:g.4917T>G, NG_042860.1:g.4917T>A

Select item 148936633411.

rs1489366334 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:18793755 (GRCh38)
16:18805077 (GRCh37)
Canonical SPDI:: NC_000016.10:18793754:G:A
Gene:: ARL6IP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.18793755G>A, NC_000016.9:g.18805077G>A, NG_042860.1:g.12924C>T

Select item 148929742712.

rs1489297427 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:18798015 (GRCh38)
16:18809337 (GRCh37)
Canonical SPDI:: NC_000016.10:18798014:A:G
Gene:: ARL6IP1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
HGVS:: NC_000016.10:g.18798015A>G, NC_000016.9:g.18809337A>G, NG_042860.1:g.8664T>C, NM_015161.3:c.200T>C, NM_015161.2:c.200T>C, NM_015161.1:c.200T>C, NM_001313858.1:c.113T>C, NP_055976.1:p.Leu67Pro, NP_001300787.1:p.Leu38Pro

Select item 148926437813.

rs1489264378 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:18798603 (GRCh38)
16:18809925 (GRCh37)
Canonical SPDI:: NC_000016.10:18798602:T:C
Gene:: ARL6IP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.18798603T>C, NC_000016.9:g.18809925T>C, NG_042860.1:g.8076A>G

Select item 148922977414.

rs1489229774 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 16:18798334 (GRCh38)
16:18809656 (GRCh37)
Canonical SPDI:: NC_000016.10:18798333:A:C
Gene:: ARL6IP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000016.10:g.18798334A>C, NC_000016.9:g.18809656A>C, NG_042860.1:g.8345T>G

Select item 148903559115.

rs1489035591 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 16:18795774 (GRCh38)
16:18807096 (GRCh37)
Canonical SPDI:: NC_000016.10:18795773:A:T
Gene:: ARL6IP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000016.10:g.18795774A>T, NC_000016.9:g.18807096A>T, NG_042860.1:g.10905T>A

Select item 148882519616.

rs1488825196 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:18790493 (GRCh38)
16:18801815 (GRCh37)
Canonical SPDI:: NC_000016.10:18790492:C:A
Gene:: RPS15A (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.18790493C>A, NC_000016.9:g.18801815C>A, NG_042860.1:g.16186G>T

Select item 148855910117.

rs1488559101 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:18804197 (GRCh38)
16:18815519 (GRCh37)
Canonical SPDI:: NC_000016.10:18804196:C:T
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000016.10:g.18804197C>T, NC_000016.9:g.18815519C>T, NG_042860.1:g.2482G>A

Select item 148830588818.

rs1488305888 [Homo sapiens]

Variant type:: DEL
Alleles:: TC>- [Show Flanks]
Chromosome:: 16:18799383 (GRCh38)
16:18810705 (GRCh37)
Canonical SPDI:: NC_000016.10:18799382:TC:
Gene:: ARL6IP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000016.10:g.18799383_18799384del, NC_000016.9:g.18810705_18810706del, NG_042860.1:g.7295_7296del

Select item 148820853819.

rs1488208538 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:18793589 (GRCh38)
16:18804911 (GRCh37)
Canonical SPDI:: NC_000016.10:18793588:G:A
Gene:: ARL6IP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000016.10:g.18793589G>A, NC_000016.9:g.18804911G>A, NG_042860.1:g.13090C>T

Select item 148817814820.

rs1488178148 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 16:18791144 (GRCh38)
16:18802466 (GRCh37)
Canonical SPDI:: NC_000016.10:18791143:A:C
Gene:: RPS15A (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.18791144A>C, NC_000016.9:g.18802466A>C, NG_042860.1:g.15535T>G

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