SNP Links for Nucleotide (Select 916539819) - SNP

Links from Nucleotide

Items: 1 to 20 of 3547

<< First< Prev

Page of 178

Next >Last >>

Select item 14915644981.

rs1491564498 has merged into rs57176480 [Homo sapiens]

Variant type:: DELINS
Alleles:: CC>-,C,CCC,CCCC,CCCCC,CCCCCC [Show Flanks]
Chromosome:: 1:26040925 (GRCh38)
1:26367416 (GRCh37)
Canonical SPDI:: NC_000001.11:26040916:CCCCCCCCCC:CCCCCCCC,NC_000001.11:26040916:CCCCCCCCCC:CCCCCCCCC,NC_000001.11:26040916:CCCCCCCCCC:CCCCCCCCCCC,NC_000001.11:26040916:CCCCCCCCCC:CCCCCCCCCCCC,NC_000001.11:26040916:CCCCCCCCCC:CCCCCCCCCCCCC,NC_000001.11:26040916:CCCCCCCCCC:CCCCCCCCCCCCCC
Gene:: SLC30A2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCCCCCCCC=0.0002/1 (ALFA)
C=0.1863/933 (1000Genomes)
HGVS:: NC_000001.11:g.26040925_26040926del, NC_000001.11:g.26040926del, NC_000001.11:g.26040926dup, NC_000001.11:g.26040925_26040926dup, NC_000001.11:g.26040924_26040926dup, NC_000001.11:g.26040923_26040926dup, NC_000001.10:g.26367416_26367417del, NC_000001.10:g.26367417del, NC_000001.10:g.26367417dup, NC_000001.10:g.26367416_26367417dup, NC_000001.10:g.26367415_26367417dup, NC_000001.10:g.26367414_26367417dup, NG_042808.1:g.10221_10222del, NG_042808.1:g.10222del, NG_042808.1:g.10222dup, NG_042808.1:g.10221_10222dup, NG_042808.1:g.10220_10222dup, NG_042808.1:g.10219_10222dup

Select item 14913414432.

rs1491341443 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ACC,GCC [Show Flanks]
Chromosome:: 1:26040916 (GRCh38)
1:26367408 (GRCh37)
Canonical SPDI:: NC_000001.11:26040916:C:CACC,NC_000001.11:26040916:C:CGCC
Gene:: SLC30A2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CGCC=0./0 (ALFA)
CGC=0.000059/8 (GnomAD)
HGVS:: NC_000001.11:g.26040917_26040918insACC, NC_000001.11:g.26040917_26040918insGCC, NC_000001.10:g.26367408_26367409insACC, NC_000001.10:g.26367408_26367409insGCC, NG_042808.1:g.10222_10223insGTG, NG_042808.1:g.10222_10223insGCG

Select item 14912783933.

rs1491278393 [Homo sapiens]

Variant type:: INS
Alleles:: ->A,G [Show Flanks]
Chromosome:: 1:26040919 (GRCh38)
1:26367411 (GRCh37)
Canonical SPDI:: NC_000001.11:26040919::A,NC_000001.11:26040919::G
Gene:: SLC30A2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.26040919_26040920insA, NC_000001.11:g.26040919_26040920insG, NC_000001.10:g.26367410_26367411insA, NC_000001.10:g.26367410_26367411insG, NG_042808.1:g.10219_10220insT, NG_042808.1:g.10219_10220insC

Select item 14910095964.

rs1491009596 has merged into rs35565258 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,A,AA,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA [Show Flanks]
Chromosome:: 1:26048323 (GRCh38)
1:26374814 (GRCh37)
Canonical SPDI:: NC_000001.11:26048307:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:26048307:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:26048307:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:26048307:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:26048307:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:26048307:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:26048307:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:26048307:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA
Gene:: LOC105376910 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.16693/836 (1000Genomes)
HGVS:: NC_000001.11:g.26048323_26048326del, NC_000001.11:g.26048324_26048326del, NC_000001.11:g.26048325_26048326del, NC_000001.11:g.26048326del, NC_000001.11:g.26048326dup, NC_000001.11:g.26048325_26048326dup, NC_000001.11:g.26048324_26048326dup, NC_000001.11:g.26048323_26048326dup, NC_000001.10:g.26374814_26374817del, NC_000001.10:g.26374815_26374817del, NC_000001.10:g.26374816_26374817del, NC_000001.10:g.26374817del, NC_000001.10:g.26374817dup, NC_000001.10:g.26374816_26374817dup, NC_000001.10:g.26374815_26374817dup, NC_000001.10:g.26374814_26374817dup, NG_042808.1:g.2828_2831del, NG_042808.1:g.2829_2831del, NG_042808.1:g.2830_2831del, NG_042808.1:g.2831del, NG_042808.1:g.2831dup, NG_042808.1:g.2830_2831dup, NG_042808.1:g.2829_2831dup, NG_042808.1:g.2828_2831dup, XR_001737948.2:n.66_69del, XR_001737948.2:n.67_69del, XR_001737948.2:n.68_69del, XR_001737948.2:n.69del, XR_001737948.2:n.69dup, XR_001737948.2:n.68_69dup, XR_001737948.2:n.67_69dup, XR_001737948.2:n.66_69dup, XR_001737948.1:n.66_69del, XR_001737948.1:n.67_69del, XR_001737948.1:n.68_69del, XR_001737948.1:n.69del, XR_001737948.1:n.69dup, XR_001737948.1:n.68_69dup, XR_001737948.1:n.67_69dup, XR_001737948.1:n.66_69dup

Select item 14909624105.

rs1490962410 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:26038571 (GRCh38)
1:26365062 (GRCh37)
Canonical SPDI:: NC_000001.11:26038570:C:A
Gene:: SLC30A2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.26038571C>A, NC_000001.10:g.26365062C>A, NG_042808.1:g.12568G>T, NM_032513.5:c.*589G>T, NM_032513.4:c.*589G>T, NM_032513.3:c.*589G>T, NM_001004434.3:c.*589G>T, NM_001004434.2:c.*589G>T, NM_001004434.1:c.*589G>T

Select item 14905549526.

rs1490554952 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:26046250 (GRCh38)
1:26372741 (GRCh37)
Canonical SPDI:: NC_000001.11:26046249:G:A
Gene:: SLC30A2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.26046250G>A, NC_000001.10:g.26372741G>A, NG_042808.1:g.4889C>T

Select item 14904977047.

rs1490497704 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:26039814 (GRCh38)
1:26366305 (GRCh37)
Canonical SPDI:: NC_000001.11:26039813:C:A,NC_000001.11:26039813:C:T
Gene:: SLC30A2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.26039814C>A, NC_000001.11:g.26039814C>T, NC_000001.10:g.26366305C>A, NC_000001.10:g.26366305C>T, NG_042808.1:g.11325G>T, NG_042808.1:g.11325G>A, NM_032513.5:c.789G>T, NM_032513.5:c.789G>A, NM_032513.4:c.789G>T, NM_032513.4:c.789G>A, NM_032513.3:c.789G>T, NM_032513.3:c.789G>A, NM_001004434.3:c.936G>T, NM_001004434.3:c.936G>A, NM_001004434.2:c.936G>T, NM_001004434.2:c.936G>A, NM_001004434.1:c.936G>T, NM_001004434.1:c.936G>A

Select item 14904795798.

rs1490479579 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:26037682 (GRCh38)
1:26364173 (GRCh37)
Canonical SPDI:: NC_000001.11:26037681:C:T
Gene:: SLC30A2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.26037682C>T, NC_000001.10:g.26364173C>T, NG_042808.1:g.13457G>A, NM_032513.5:c.*1478G>A, NM_001004434.3:c.*1478G>A

Select item 14904425469.

rs1490442546 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:26047155 (GRCh38)
1:26373646 (GRCh37)
Canonical SPDI:: NC_000001.11:26047154:T:C,NC_000001.11:26047154:T:G
Gene:: SLC30A2 (Varview), LOC105376910 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
G=0.008734/16 (Korea1K)
HGVS:: NC_000001.11:g.26047155T>C, NC_000001.11:g.26047155T>G, NC_000001.10:g.26373646T>C, NC_000001.10:g.26373646T>G, NG_042808.1:g.3984A>G, NG_042808.1:g.3984A>C

Select item 149012328610.

rs1490123286 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:26042359 (GRCh38)
1:26368850 (GRCh37)
Canonical SPDI:: NC_000001.11:26042358:C:T
Gene:: SLC30A2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.26042359C>T, NC_000001.10:g.26368850C>T, NG_042808.1:g.8780G>A

Select item 149011960111.

rs1490119601 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:26038193 (GRCh38)
1:26364684 (GRCh37)
Canonical SPDI:: NC_000001.11:26038192:A:G
Gene:: SLC30A2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.26038193A>G, NC_000001.10:g.26364684A>G, NG_042808.1:g.12946T>C, NM_032513.5:c.*967T>C, NM_032513.4:c.*967T>C, NM_032513.3:c.*967T>C, NM_001004434.3:c.*967T>C, NM_001004434.2:c.*967T>C, NM_001004434.1:c.*967T>C

Select item 148995978112.

rs1489959781 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 1:26040930 (GRCh38)
1:26367421 (GRCh37)
Canonical SPDI:: NC_000001.11:26040929:T:A,NC_000001.11:26040929:T:C
Gene:: SLC30A2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.26040930T>A, NC_000001.11:g.26040930T>C, NC_000001.10:g.26367421T>A, NC_000001.10:g.26367421T>C, NG_042808.1:g.10209A>T, NG_042808.1:g.10209A>G

Select item 148995651813.

rs1489956518 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:26037652 (GRCh38)
1:26364143 (GRCh37)
Canonical SPDI:: NC_000001.11:26037651:C:T
Gene:: SLC30A2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.26037652C>T, NC_000001.10:g.26364143C>T, NG_042808.1:g.13487G>A, NM_032513.5:c.*1508G>A, NM_001004434.3:c.*1508G>A

Select item 148944459414.

rs1489444594 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:26044856 (GRCh38)
1:26371347 (GRCh37)
Canonical SPDI:: NC_000001.11:26044855:G:T
Gene:: SLC30A2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.26044856G>T, NC_000001.10:g.26371347G>T, NG_042808.1:g.6283C>A

Select item 148932667315.

rs1489326673 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:26050667 (GRCh38)
1:26377158 (GRCh37)
Canonical SPDI:: NC_000001.11:26050666:T:C
Gene:: LOC105376910 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.26050667T>C, NC_000001.10:g.26377158T>C, NG_033268.1:g.21968A>G, NG_042808.1:g.472A>G

Select item 148892044916.

rs1488920449 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:26042502 (GRCh38)
1:26368993 (GRCh37)
Canonical SPDI:: NC_000001.11:26042501:G:T
Gene:: SLC30A2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.26042502G>T, NC_000001.10:g.26368993G>T, NG_042808.1:g.8637C>A

Select item 148889621917.

rs1488896219 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:26040827 (GRCh38)
1:26367318 (GRCh37)
Canonical SPDI:: NC_000001.11:26040826:C:T
Gene:: SLC30A2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.26040827C>T, NC_000001.10:g.26367318C>T, NG_042808.1:g.10312G>A

Select item 148887931118.

rs1488879311 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:26044336 (GRCh38)
1:26370827 (GRCh37)
Canonical SPDI:: NC_000001.11:26044335:G:T
Gene:: SLC30A2 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.26044336G>T, NC_000001.10:g.26370827G>T, NG_042808.1:g.6803C>A, NM_001004434.3:c.380C>A, NM_001004434.2:c.380C>A, NM_001004434.1:c.380C>A, NP_001004434.1:p.Pro127Gln

Select item 148838878819.

rs1488388788 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:26047635 (GRCh38)
1:26374126 (GRCh37)
Canonical SPDI:: NC_000001.11:26047634:G:C
Gene:: SLC30A2 (Varview), LOC105376910 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.00003/8 (TOPMED)
HGVS:: NC_000001.11:g.26047635G>C, NC_000001.10:g.26374126G>C, NG_042808.1:g.3504C>G

Select item 148821956520.

rs1488219565 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 1:26036769 (GRCh38)
1:26363260 (GRCh37)
Canonical SPDI:: NC_000001.11:26036768:GGG:GG
Gene:: EXTL1 (Varview), SLC30A2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
HGVS:: NC_000001.11:g.26036771del, NC_000001.10:g.26363262del, NG_042808.1:g.14370del

<< First< Prev

Page of 178

Next >Last >>

dbSNP

Result Filters

Clinical Significance

Validation Status

Publication

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Nucleotide

Items: 1 to 20 of 3547

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity