SNP Links for Nucleotide (Select 84872110) - SNP

Links from Nucleotide

Items: 1 to 20 of 26

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Select item 14907875541.

rs1490787554 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 22:21044236 (GRCh38)
22:21398525 (GRCh37)
Canonical SPDI:: NC_000022.11:21044235:T:G
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000156/1 (1000Genomes)
HGVS:: NC_000022.11:g.21044236T>G, NC_000022.10:g.21398525T>G, NR_002829.1:n.14A>C

Select item 14514787842.

rs1451478784 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21044186 (GRCh38)
22:21398475 (GRCh37)
Canonical SPDI:: NC_000022.11:21044185:C:T
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
T=0.00003/8 (TOPMED)
HGVS:: NC_000022.11:g.21044186C>T, NC_000022.10:g.21398475C>T, NR_002829.1:n.64G>A

Select item 14404575993.

rs1440457599 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21044154 (GRCh38)
22:21398443 (GRCh37)
Canonical SPDI:: NC_000022.11:21044153:G:A
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21044154G>A, NC_000022.10:g.21398443G>A, NR_002829.1:n.96C>T

Select item 14313925054.

rs1431392505 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 22:21042407 (GRCh38)
22:21396696 (GRCh37)
Canonical SPDI:: NC_000022.11:21042406:T:A
Gene:: P2RX6P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000022.11:g.21042407T>A, NC_000022.10:g.21396696T>A, NR_002829.1:n.109A>T

Select item 13442735585.

rs1344273558 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21044164 (GRCh38)
22:21398453 (GRCh37)
Canonical SPDI:: NC_000022.11:21044163:G:A
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (KOREAN)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21044164G>A, NC_000022.10:g.21398453G>A, NR_002829.1:n.86C>T

Select item 13280717096.

rs1328071709 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21042413 (GRCh38)
22:21396702 (GRCh37)
Canonical SPDI:: NC_000022.11:21042412:C:T
Gene:: P2RX6P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.21042413C>T, NC_000022.10:g.21396702C>T, NR_002829.1:n.103G>A

Select item 13240064057.

rs1324006405 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:21044225 (GRCh38)
22:21398514 (GRCh37)
Canonical SPDI:: NC_000022.11:21044224:T:C
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000022.11:g.21044225T>C, NC_000022.10:g.21398514T>C, NR_002829.1:n.25A>G

Select item 12835651558.

rs1283565155 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 22:21044159 (GRCh38)
22:21398448 (GRCh37)
Canonical SPDI:: NC_000022.11:21044158:T:G
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21044159T>G, NC_000022.10:g.21398448T>G, NR_002829.1:n.91A>C

Select item 12835014039.

rs1283501403 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 22:21044194 (GRCh38)
22:21398483 (GRCh37)
Canonical SPDI:: NC_000022.11:21044193:A:C
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21044194A>C, NC_000022.10:g.21398483A>C, NR_002829.1:n.56T>G

Select item 127147337210.

rs1271473372 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21044187 (GRCh38)
22:21398476 (GRCh37)
Canonical SPDI:: NC_000022.11:21044186:G:A
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000023/6 (TOPMED)
A=0.000036/5 (GnomAD)
HGVS:: NC_000022.11:g.21044187G>A, NC_000022.10:g.21398476G>A, NR_002829.1:n.63C>T

Select item 127053792111.

rs1270537921 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21044215 (GRCh38)
22:21398504 (GRCh37)
Canonical SPDI:: NC_000022.11:21044214:G:A
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000022.11:g.21044215G>A, NC_000022.10:g.21398504G>A, NR_002829.1:n.35C>T

Select item 126984045112.

rs1269840451 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 22:21044238 (GRCh38)
22:21398527 (GRCh37)
Canonical SPDI:: NC_000022.11:21044237:T:A
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.0002/1 (ALFA)
HGVS:: NC_000022.11:g.21044238T>A, NC_000022.10:g.21398527T>A, NR_002829.1:n.12A>T

Select item 124009500613.

rs1240095006 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21044163 (GRCh38)
22:21398452 (GRCh37)
Canonical SPDI:: NC_000022.11:21044162:C:T
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000034/9 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000022.11:g.21044163C>T, NC_000022.10:g.21398452C>T, NR_002829.1:n.87G>A

Select item 123041313514.

rs1230413135 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 22:21044165 (GRCh38)
22:21398454 (GRCh37)
Canonical SPDI:: NC_000022.11:21044164:A:G
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000022.11:g.21044165A>G, NC_000022.10:g.21398454A>G, NR_002829.1:n.85T>C

Select item 122494433615.

rs1224944336 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21044237 (GRCh38)
22:21398526 (GRCh37)
Canonical SPDI:: NC_000022.11:21044236:G:A
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000022.11:g.21044237G>A, NC_000022.10:g.21398526G>A, NR_002829.1:n.13C>T

Select item 119683901416.

rs1196839014 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 22:21044247 (GRCh38)
22:21398536 (GRCh37)
Canonical SPDI:: NC_000022.11:21044246:T:A
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000022.11:g.21044247T>A, NC_000022.10:g.21398536T>A, NR_002829.1:n.3A>T

Select item 115824725417.

rs1158247254 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21044151 (GRCh38)
22:21398440 (GRCh37)
Canonical SPDI:: NC_000022.11:21044150:G:A
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000022.11:g.21044151G>A, NC_000022.10:g.21398440G>A, NR_002829.1:n.99C>T

Select item 100730778518.

rs1007307785 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 22:21044223 (GRCh38)
22:21398512 (GRCh37)
Canonical SPDI:: NC_000022.11:21044222:C:G
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000023/6 (TOPMED)
HGVS:: NC_000022.11:g.21044223C>G, NC_000022.10:g.21398512C>G, NR_002829.1:n.27G>C

Select item 89025010519.

rs890250105 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21044214 (GRCh38)
22:21398503 (GRCh37)
Canonical SPDI:: NC_000022.11:21044213:C:T
Gene:: LRRC74B (Varview), P2RX6P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000022.11:g.21044214C>T, NC_000022.10:g.21398503C>T, NR_002829.1:n.36G>A

Select item 86731249520.

rs867312495 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21042405 (GRCh38)
22:21396694 (GRCh37)
Canonical SPDI:: NC_000022.11:21042404:C:T
Gene:: P2RX6P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000023/6 (TOPMED)
T=0.00463/1 (Qatari)
HGVS:: NC_000022.11:g.21042405C>T, NC_000022.10:g.21396694C>T, NR_002829.1:n.111G>A

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