SNP Links for Nucleotide (Select 754172153) - SNP

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Links from Nucleotide

Items: 1 to 20 of 162

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Select item 14897346141.

rs1489734614 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:17759165 (GRCh38)
17:17662479 (GRCh37)
Canonical SPDI:: NC_000017.11:17759164:G:T
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.17759165G>T, NC_000017.10:g.17662479G>T, NG_007101.2:g.82693G>T, NR_130894.1:n.707C>A

Select item 14877815572.

rs1487781557 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 17:17766117 (GRCh38)
17:17669431 (GRCh37)
Canonical SPDI:: NC_000017.11:17766116:C:G,NC_000017.11:17766116:C:T
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.17766117C>G, NC_000017.11:g.17766117C>T, NC_000017.10:g.17669431C>G, NC_000017.10:g.17669431C>T, NG_007101.2:g.89645C>G, NG_007101.2:g.89645C>T, NR_130894.1:n.186G>C, NR_130894.1:n.186G>A

Select item 14766723083.

rs1476672308 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 17:17765888 (GRCh38)
17:17669202 (GRCh37)
Canonical SPDI:: NC_000017.11:17765887:C:G
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.17765888C>G, NC_000017.10:g.17669202C>G, NG_007101.2:g.89416C>G, NR_130894.1:n.415G>C

Select item 14748977754.

rs1474897775 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 17:17759345 (GRCh38)
17:17662660 (GRCh37)
Canonical SPDI:: NC_000017.11:17759345:TT:TTT
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: TTT=0./0 (ALFA)
HGVS:: NC_000017.11:g.17759347dup, NC_000017.10:g.17662661dup, NG_007101.2:g.82875dup, NR_130894.1:n.526dup

Select item 14735690405.

rs1473569040 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:17759273 (GRCh38)
17:17662587 (GRCh37)
Canonical SPDI:: NC_000017.11:17759272:A:G
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.00007/1 (ALFA)
HGVS:: NC_000017.11:g.17759273A>G, NC_000017.10:g.17662587A>G, NG_007101.2:g.82801A>G, NR_130894.1:n.599T>C

Select item 14685528066.

rs1468552806 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:17759330 (GRCh38)
17:17662644 (GRCh37)
Canonical SPDI:: NC_000017.11:17759329:A:G
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.17759330A>G, NC_000017.10:g.17662644A>G, NG_007101.2:g.82858A>G, NR_130894.1:n.542T>C

Select item 14650072527.

rs1465007252 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:17759362 (GRCh38)
17:17662676 (GRCh37)
Canonical SPDI:: NC_000017.11:17759361:A:G
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000017.11:g.17759362A>G, NC_000017.10:g.17662676A>G, NG_007101.2:g.82890A>G, NR_130894.1:n.510T>C

Select item 14462321288.

rs1446232128 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:17766216 (GRCh38)
17:17669530 (GRCh37)
Canonical SPDI:: NC_000017.11:17766215:C:T
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.17766216C>T, NC_000017.10:g.17669530C>T, NG_007101.2:g.89744C>T, NR_130894.1:n.87G>A

Select item 14459011029.

rs1445901102 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 17:17759277 (GRCh38)
17:17662591 (GRCh37)
Canonical SPDI:: NC_000017.11:17759276:T:G
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.17759277T>G, NC_000017.10:g.17662591T>G, NG_007101.2:g.82805T>G, NR_130894.1:n.595A>C

Select item 144438271810.

rs1444382718 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:17766097 (GRCh38)
17:17669411 (GRCh37)
Canonical SPDI:: NC_000017.11:17766096:G:A
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.17766097G>A, NC_000017.10:g.17669411G>A, NG_007101.2:g.89625G>A, NR_130894.1:n.206C>T

Select item 144107786811.

rs1441077868 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:17765930 (GRCh38)
17:17669244 (GRCh37)
Canonical SPDI:: NC_000017.11:17765929:G:A
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.17765930G>A, NC_000017.10:g.17669244G>A, NG_007101.2:g.89458G>A, NR_130894.1:n.373C>T

Select item 143865855212.

rs1438658552 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:17766065 (GRCh38)
17:17669379 (GRCh37)
Canonical SPDI:: NC_000017.11:17766064:G:T
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.17766065G>T, NC_000017.10:g.17669379G>T, NG_007101.2:g.89593G>T, NR_130894.1:n.238C>A

Select item 143794129613.

rs1437941296 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:17766077 (GRCh38)
17:17669391 (GRCh37)
Canonical SPDI:: NC_000017.11:17766076:C:A
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.17766077C>A, NC_000017.10:g.17669391C>A, NG_007101.2:g.89605C>A, NR_130894.1:n.226G>T

Select item 143750711314.

rs1437507113 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:17759302 (GRCh38)
17:17662616 (GRCh37)
Canonical SPDI:: NC_000017.11:17759301:C:T
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.17759302C>T, NC_000017.10:g.17662616C>T, NG_007101.2:g.82830C>T, NR_130894.1:n.570G>A

Select item 143297351715.

rs1432973517 [Homo sapiens]

Variant type:: DEL
Alleles:: GC>- [Show Flanks]
Chromosome:: 17:17759374 (GRCh38)
17:17662688 (GRCh37)
Canonical SPDI:: NC_000017.11:17759373:GC:
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.17759374_17759375del, NC_000017.10:g.17662688_17662689del, NG_007101.2:g.82902_82903del, NR_130894.1:n.497_498del

Select item 143199322316.

rs1431993223 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 17:17766286 (GRCh38)
17:17669600 (GRCh37)
Canonical SPDI:: NC_000017.11:17766285:A:C
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000042/11 (TOPMED)
HGVS:: NC_000017.11:g.17766286A>C, NC_000017.10:g.17669600A>C, NG_007101.2:g.89814A>C, NR_130894.1:n.17T>G

Select item 142936335617.

rs1429363356 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:17766296 (GRCh38)
17:17669610 (GRCh37)
Canonical SPDI:: NC_000017.11:17766295:A:G
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.17766296A>G, NC_000017.10:g.17669610A>G, NG_007101.2:g.89824A>G, NR_130894.1:n.7T>C

Select item 140450156218.

rs1404501562 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:17759194 (GRCh38)
17:17662508 (GRCh37)
Canonical SPDI:: NC_000017.11:17759193:G:T
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.17759194G>T, NC_000017.10:g.17662508G>T, NG_007101.2:g.82722G>T, NR_130894.1:n.678C>A

Select item 140323082619.

rs1403230826 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:17766193 (GRCh38)
17:17669507 (GRCh37)
Canonical SPDI:: NC_000017.11:17766192:C:T
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.17766193C>T, NC_000017.10:g.17669507C>T, NG_007101.2:g.89721C>T, NR_130894.1:n.110G>A

Select item 140174936520.

rs1401749365 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 17:17765832 (GRCh38)
17:17669146 (GRCh37)
Canonical SPDI:: NC_000017.11:17765831:GGGG:GGG
Gene:: RAI1 (Varview), RAI1-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: GGG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.17765835del, NC_000017.10:g.17669149del, NG_007101.2:g.89363del, NR_130894.1:n.471del