SNP Links for Nucleotide (Select 589058170) - SNP

Links from Nucleotide

Items: 1 to 20 of 235

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Select item 14903516221.

rs1490351622 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:24436 (GRCh38)
3:66110 (GRCh37)
Canonical SPDI:: NC_000003.12:24435:T:C
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.24436T>C, NC_000003.11:g.66110T>C, NR_110824.1:n.631T>C

Select item 14869027542.

rs1486902754 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACA>-,CA [Show Flanks]
Chromosome:: 3:11774 (GRCh38)
3:0 (GRCh37)
Canonical SPDI:: NC_000003.12:11772:ACACA:A,NC_000003.12:11772:ACACA:ACA
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACA=0.4398/585 (ALFA)
AC=0.0067/17 (GnomAD)
-=0.1402/898 (1000Genomes)
HGVS:: NC_000003.12:g.11774_11777del, NC_000003.12:g.11774CA[1], NR_110824.1:n.24_27del, NR_110824.1:n.24CA[1]

Select item 14865639233.

rs1486563923 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:14777 (GRCh38)
3:-1 (GRCh37)
Canonical SPDI:: NC_000003.12:14776:A:G
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.14777A>G, NR_110824.1:n.56A>G

Select item 14847182394.

rs1484718239 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 3:11796 (GRCh38)
3:-1 (GRCh37)
Canonical SPDI:: NC_000003.12:11795:C:A,NC_000003.12:11795:C:G,NC_000003.12:11795:C:T
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000071/2 (TOMMO)
HGVS:: NC_000003.12:g.11796C>A, NC_000003.12:g.11796C>G, NC_000003.12:g.11796C>T, NR_110824.1:n.46C>A, NR_110824.1:n.46C>G, NR_110824.1:n.46C>T

Select item 14837129075.

rs1483712907 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:24216 (GRCh38)
3:65890 (GRCh37)
Canonical SPDI:: NC_000003.12:24215:C:T
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000003.12:g.24216C>T, NC_000003.11:g.65890C>T, NR_110824.1:n.411C>T

Select item 14825131456.

rs1482513145 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:24261 (GRCh38)
3:65935 (GRCh37)
Canonical SPDI:: NC_000003.12:24260:G:A
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000026/7 (TOPMED)
HGVS:: NC_000003.12:g.24261G>A, NC_000003.11:g.65935G>A, NR_110824.1:n.456G>A

Select item 14818859267.

rs1481885926 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 3:14824 (GRCh38)
3:-1 (GRCh37)
Canonical SPDI:: NC_000003.12:14823:T:A,NC_000003.12:14823:T:C
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.14824T>A, NC_000003.12:g.14824T>C, NR_110824.1:n.103T>A, NR_110824.1:n.103T>C

Select item 14799228298.

rs1479922829 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:24044 (GRCh38)
3:65718 (GRCh37)
Canonical SPDI:: NC_000003.12:24043:G:A
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000003.12:g.24044G>A, NC_000003.11:g.65718G>A, NR_110824.1:n.239G>A

Select item 14761296479.

rs1476129647 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 3:14818 (GRCh38)
3:-1 (GRCh37)
Canonical SPDI:: NC_000003.12:14817:T:A,NC_000003.12:14817:T:C
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.14818T>A, NC_000003.12:g.14818T>C, NR_110824.1:n.97T>A, NR_110824.1:n.97T>C

Select item 147572070110.

rs1475720701 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 3:14772 (GRCh38)
3:-1 (GRCh37)
Canonical SPDI:: NC_000003.12:14771:G:A,NC_000003.12:14771:G:C
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.14772G>A, NC_000003.12:g.14772G>C, NR_110824.1:n.51G>A, NR_110824.1:n.51G>C

Select item 147057041111.

rs1470570411 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 3:24069 (GRCh38)
3:65743 (GRCh37)
Canonical SPDI:: NC_000003.12:24068:C:A,NC_000003.12:24068:C:G
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000043/6 (GnomAD)
HGVS:: NC_000003.12:g.24069C>A, NC_000003.12:g.24069C>G, NC_000003.11:g.65743C>A, NC_000003.11:g.65743C>G, NR_110824.1:n.264C>A, NR_110824.1:n.264C>G

Select item 146914355312.

rs1469143553 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 3:24053 (GRCh38)
3:65727 (GRCh37)
Canonical SPDI:: NC_000003.12:24052:GG:G
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.00005/7 (GnomAD)
-=0.000098/26 (TOPMED)
-=0.000546/1 (Korea1K)
-=0.000566/9 (TOMMO)
HGVS:: NC_000003.12:g.24054del, NC_000003.11:g.65728del, NR_110824.1:n.249del

Select item 146914282713.

rs1469142827 has merged into rs1403589420 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA [Show Flanks]
Chromosome:: 3:24091 (GRCh38)
3:65765 (GRCh37)
Canonical SPDI:: NC_000003.12:24090:AAAA:AAA,NC_000003.12:24090:AAAA:AAAAA
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAA=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.24094del, NC_000003.12:g.24094dup, NC_000003.11:g.65768del, NC_000003.11:g.65768dup, NR_110824.1:n.289del, NR_110824.1:n.289dup

Select item 146845804214.

rs1468458042 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 3:23983 (GRCh38)
3:65657 (GRCh37)
Canonical SPDI:: NC_000003.12:23982:G:A,NC_000003.12:23982:G:C
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.23983G>A, NC_000003.12:g.23983G>C, NC_000003.11:g.65657G>A, NC_000003.11:g.65657G>C, NR_110824.1:n.178G>A, NR_110824.1:n.178G>C

Select item 146472088215.

rs1464720882 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 3:24427 (GRCh38)
3:66101 (GRCh37)
Canonical SPDI:: NC_000003.12:24426:A:C
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.24427A>C, NC_000003.11:g.66101A>C, NR_110824.1:n.622A>C

Select item 146117787816.

rs1461177878 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:24132 (GRCh38)
3:65806 (GRCh37)
Canonical SPDI:: NC_000003.12:24131:G:A
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
HGVS:: NC_000003.12:g.24132G>A, NC_000003.11:g.65806G>A, NR_110824.1:n.327G>A

Select item 145500241217.

rs1455002412 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:11790 (GRCh38)
3:-1 (GRCh37)
Canonical SPDI:: NC_000003.12:11789:T:C
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.11790T>C, NR_110824.1:n.40T>C

Select item 145496293918.

rs1454962939 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 3:11767 (GRCh38)
3:-1 (GRCh37)
Canonical SPDI:: NC_000003.12:11766:A:C,NC_000003.12:11766:A:G
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.00025/3 (ALFA)
HGVS:: NC_000003.12:g.11767A>C, NC_000003.12:g.11767A>G, NR_110824.1:n.17A>C, NR_110824.1:n.17A>G

Select item 145492684919.

rs1454926849 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:11756 (GRCh38)
3:-1 (GRCh37)
Canonical SPDI:: NC_000003.12:11755:G:A
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000003.12:g.11756G>A, NR_110824.1:n.6G>A

Select item 145416980320.

rs1454169803 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 3:11761 (GRCh38)
3:-1 (GRCh37)
Canonical SPDI:: NC_000003.12:11760:A:C,NC_000003.12:11760:A:G
Gene:: LINC01986 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000003.12:g.11761A>C, NC_000003.12:g.11761A>G, NR_110824.1:n.11A>C, NR_110824.1:n.11A>G

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Links from Nucleotide

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