SNP Links for Nucleotide (Select 586804318) - SNP

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Links from Nucleotide

Items: 1 to 20 of 133

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Select item 14894073361.

rs1489407336 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:22533292 (GRCh38)
19:22716094 (GRCh37)
Canonical SPDI:: NC_000019.10:22533291:A:G
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
G=0.000035/1 (TOMMO)
HGVS:: NC_000019.10:g.22533292A>G, NC_000019.9:g.22716094A>G, NR_110663.1:n.411A>G, NR_110664.1:n.366A>G

Select item 14804054062.

rs1480405406 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:22533297 (GRCh38)
19:22716099 (GRCh37)
Canonical SPDI:: NC_000019.10:22533296:G:T
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.22533297G>T, NC_000019.9:g.22716099G>T, NR_110663.1:n.416G>T, NR_110664.1:n.371G>T

Select item 14792021913.

rs1479202191 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 19:22532721 (GRCh38)
19:22715523 (GRCh37)
Canonical SPDI:: NC_000019.10:22532720:C:A,NC_000019.10:22532720:C:G
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22532721C>A, NC_000019.10:g.22532721C>G, NC_000019.9:g.22715523C>A, NC_000019.9:g.22715523C>G, NR_110663.1:n.96C>A, NR_110663.1:n.96C>G, NR_110664.1:n.96C>A, NR_110664.1:n.96C>G

Select item 14789756664.

rs1478975666 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:22532795 (GRCh38)
19:22715597 (GRCh37)
Canonical SPDI:: NC_000019.10:22532794:G:A
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.22532795G>A, NC_000019.9:g.22715597G>A, NR_110663.1:n.170G>A, NR_110664.1:n.170G>A

Select item 14756839745.

rs1475683974 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:22532893 (GRCh38)
19:22715695 (GRCh37)
Canonical SPDI:: NC_000019.10:22532892:C:G
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22532893C>G, NC_000019.9:g.22715695C>G, NR_110663.1:n.268C>G, NR_110664.1:n.268C>G

Select item 14676541416.

rs1467654141 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:22532867 (GRCh38)
19:22715669 (GRCh37)
Canonical SPDI:: NC_000019.10:22532866:G:T
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.22532867G>T, NC_000019.9:g.22715669G>T, NR_110663.1:n.242G>T, NR_110664.1:n.242G>T

Select item 14656672527.

rs1465667252 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:22533410 (GRCh38)
19:22716212 (GRCh37)
Canonical SPDI:: NC_000019.10:22533409:T:G
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22533410T>G, NC_000019.9:g.22716212T>G, NR_110663.1:n.529T>G, NR_110664.1:n.484T>G

Select item 14611597408.

rs1461159740 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 19:22533389 (GRCh38)
19:22716191 (GRCh37)
Canonical SPDI:: NC_000019.10:22533388:T:C,NC_000019.10:22533388:T:G
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000054/1 (ALFA)
C=0.000019/5 (TOPMED)
C=0.000029/4 (GnomAD)
C=0.000223/1 (Estonian)
G=0.000546/1 (Korea1K)
HGVS:: NC_000019.10:g.22533389T>C, NC_000019.10:g.22533389T>G, NC_000019.9:g.22716191T>C, NC_000019.9:g.22716191T>G, NR_110663.1:n.508T>C, NR_110663.1:n.508T>G, NR_110664.1:n.463T>C, NR_110664.1:n.463T>G

Select item 14601183409.

rs1460118340 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:22532834 (GRCh38)
19:22715636 (GRCh37)
Canonical SPDI:: NC_000019.10:22532833:C:T
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000019/5 (TOPMED)
HGVS:: NC_000019.10:g.22532834C>T, NC_000019.9:g.22715636C>T, NR_110663.1:n.209C>T, NR_110664.1:n.209C>T

Select item 145793666310.

rs1457936663 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:22533252 (GRCh38)
19:22716054 (GRCh37)
Canonical SPDI:: NC_000019.10:22533251:T:C
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22533252T>C, NC_000019.9:g.22716054T>C, NR_110663.1:n.371T>C, NR_110664.1:n.326T>C

Select item 145279235711.

rs1452792357 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:22532642 (GRCh38)
19:22715444 (GRCh37)
Canonical SPDI:: NC_000019.10:22532641:T:C
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22532642T>C, NC_000019.9:g.22715444T>C, NR_110663.1:n.17T>C, NR_110664.1:n.17T>C

Select item 144302911112.

rs1443029111 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:22532908 (GRCh38)
19:22715710 (GRCh37)
Canonical SPDI:: NC_000019.10:22532907:T:G
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.22532908T>G, NC_000019.9:g.22715710T>G, NR_110663.1:n.283T>G, NR_110664.1:n.283T>G

Select item 143219477213.

rs1432194772 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:22532643 (GRCh38)
19:22715445 (GRCh37)
Canonical SPDI:: NC_000019.10:22532642:G:A
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.22532643G>A, NC_000019.9:g.22715445G>A, NR_110663.1:n.18G>A, NR_110664.1:n.18G>A

Select item 141675486114.

rs1416754861 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:22532889 (GRCh38)
19:22715691 (GRCh37)
Canonical SPDI:: NC_000019.10:22532888:G:A
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22532889G>A, NC_000019.9:g.22715691G>A, NR_110663.1:n.264G>A, NR_110664.1:n.264G>A

Select item 141592968215.

rs1415929682 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:22533387 (GRCh38)
19:22716189 (GRCh37)
Canonical SPDI:: NC_000019.10:22533386:T:G
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22533387T>G, NC_000019.9:g.22716189T>G, NR_110663.1:n.506T>G, NR_110664.1:n.461T>G

Select item 140612750016.

rs1406127500 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:22532747 (GRCh38)
19:22715549 (GRCh37)
Canonical SPDI:: NC_000019.10:22532746:G:A
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.22532747G>A, NC_000019.9:g.22715549G>A, NR_110663.1:n.122G>A, NR_110664.1:n.122G>A

Select item 139795693117.

rs1397956931 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:22532713 (GRCh38)
19:22715515 (GRCh37)
Canonical SPDI:: NC_000019.10:22532712:G:A,NC_000019.10:22532712:G:T
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.22532713G>A, NC_000019.10:g.22532713G>T, NC_000019.9:g.22715515G>A, NC_000019.9:g.22715515G>T, NR_110663.1:n.88G>A, NR_110663.1:n.88G>T, NR_110664.1:n.88G>A, NR_110664.1:n.88G>T

Select item 139181697818.

rs1391816978 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:22532896 (GRCh38)
19:22715698 (GRCh37)
Canonical SPDI:: NC_000019.10:22532895:G:A
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.22532896G>A, NC_000019.9:g.22715698G>A, NR_110663.1:n.271G>A, NR_110664.1:n.271G>A

Select item 138996826819.

rs1389968268 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:22533445 (GRCh38)
19:22716247 (GRCh37)
Canonical SPDI:: NC_000019.10:22533444:C:T
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22533445C>T, NC_000019.9:g.22716247C>T, NR_110663.1:n.564C>T, NR_110664.1:n.519C>T

Select item 138611232620.

rs1386112326 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:22532780 (GRCh38)
19:22715582 (GRCh37)
Canonical SPDI:: NC_000019.10:22532779:C:T
Gene:: LINC01233 (Varview), LOC105376917 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.22532780C>T, NC_000019.9:g.22715582C>T, NR_110663.1:n.155C>T, NR_110664.1:n.155C>T