SNP Links for Nucleotide (Select 574957323) - SNP

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Links from Nucleotide

Items: 1 to 20 of 559

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Select item 14908408621.

rs1490840862 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:183038396 (GRCh38)
4:183959549 (GRCh37)
Canonical SPDI:: NC_000004.12:183038395:A:T
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000044/6 (GnomAD)
HGVS:: NC_000004.12:g.183038396A>T, NC_000004.11:g.183959549A>T, NR_003612.2:n.732A>T, NR_003612.1:n.732A>T

Select item 14904843822.

rs1490484382 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:183039620 (GRCh38)
4:183960773 (GRCh37)
Canonical SPDI:: NC_000004.12:183039619:C:T
Gene:: CIBAR1P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.183039620C>T, NC_000004.11:g.183960773C>T, NR_003612.2:n.1956C>T, NR_003612.1:n.1956C>T

Select item 14903316963.

rs1490331696 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:183038907 (GRCh38)
4:183960060 (GRCh37)
Canonical SPDI:: NC_000004.12:183038906:C:G
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.183038907C>G, NC_000004.11:g.183960060C>G, NR_003612.2:n.1243C>G, NR_003612.1:n.1243C>G

Select item 14896748474.

rs1489674847 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:183038066 (GRCh38)
4:183959219 (GRCh37)
Canonical SPDI:: NC_000004.12:183038065:G:A
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000004.12:g.183038066G>A, NC_000004.11:g.183959219G>A, NR_003612.2:n.402G>A, NR_003612.1:n.402G>A

Select item 14863361275.

rs1486336127 has merged into rs1035072729 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA [Show Flanks]
Chromosome:: 4:183038226 (GRCh38)
4:183959379 (GRCh37)
Canonical SPDI:: NC_000004.12:183038225:AAAAAAAA:AAAAAAA,NC_000004.12:183038225:AAAAAAAA:AAAAAAAAA
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAA=0./0 (ALFA)
-=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.183038233del, NC_000004.12:g.183038233dup, NC_000004.11:g.183959386del, NC_000004.11:g.183959386dup, NR_003612.2:n.569del, NR_003612.2:n.569dup, NR_003612.1:n.569del, NR_003612.1:n.569dup

Select item 14830965156.

rs1483096515 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:183038726 (GRCh38)
4:183959879 (GRCh37)
Canonical SPDI:: NC_000004.12:183038725:T:G
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.183038726T>G, NC_000004.11:g.183959879T>G, NR_003612.2:n.1062T>G, NR_003612.1:n.1062T>G

Select item 14823784477.

rs1482378447 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:183038403 (GRCh38)
4:183959556 (GRCh37)
Canonical SPDI:: NC_000004.12:183038402:G:A
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.183038403G>A, NC_000004.11:g.183959556G>A, NR_003612.2:n.739G>A, NR_003612.1:n.739G>A

Select item 14814913838.

rs1481491383 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 4:183038245 (GRCh38)
4:183959398 (GRCh37)
Canonical SPDI:: NC_000004.12:183038244:C:A,NC_000004.12:183038244:C:T
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000004.12:g.183038245C>A, NC_000004.12:g.183038245C>T, NC_000004.11:g.183959398C>A, NC_000004.11:g.183959398C>T, NR_003612.2:n.581C>A, NR_003612.2:n.581C>T, NR_003612.1:n.581C>A, NR_003612.1:n.581C>T

Select item 14813559489.

rs1481355948 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 4:183037756 (GRCh38)
4:183958909 (GRCh37)
Canonical SPDI:: NC_000004.12:183037755:C:A,NC_000004.12:183037755:C:T
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.183037756C>A, NC_000004.12:g.183037756C>T, NC_000004.11:g.183958909C>A, NC_000004.11:g.183958909C>T, NR_003612.2:n.92C>A, NR_003612.2:n.92C>T, NR_003612.1:n.92C>A, NR_003612.1:n.92C>T

Select item 148111221210.

rs1481112212 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:183038889 (GRCh38)
4:183960042 (GRCh37)
Canonical SPDI:: NC_000004.12:183038888:A:G
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.183038889A>G, NC_000004.11:g.183960042A>G, NR_003612.2:n.1225A>G, NR_003612.1:n.1225A>G

Select item 148078660911.

rs1480786609 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:183038386 (GRCh38)
4:183959539 (GRCh37)
Canonical SPDI:: NC_000004.12:183038385:A:G
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.183038386A>G, NC_000004.11:g.183959539A>G, NR_003612.2:n.722A>G, NR_003612.1:n.722A>G

Select item 147410531812.

rs1474105318 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 4:183039096 (GRCh38)
4:183960249 (GRCh37)
Canonical SPDI:: NC_000004.12:183039095:T:C,NC_000004.12:183039095:T:G
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.183039096T>C, NC_000004.12:g.183039096T>G, NC_000004.11:g.183960249T>C, NC_000004.11:g.183960249T>G, NR_003612.2:n.1432T>C, NR_003612.2:n.1432T>G, NR_003612.1:n.1432T>C, NR_003612.1:n.1432T>G

Select item 147349683113.

rs1473496831 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:183038479 (GRCh38)
4:183959632 (GRCh37)
Canonical SPDI:: NC_000004.12:183038478:A:G
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.183038479A>G, NC_000004.11:g.183959632A>G, NR_003612.2:n.815A>G, NR_003612.1:n.815A>G

Select item 147113514914.

rs1471135149 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 4:183039683 (GRCh38)
4:183960836 (GRCh37)
Canonical SPDI:: NC_000004.12:183039682:A:C,NC_000004.12:183039682:A:G
Gene:: CIBAR1P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.183039683A>C, NC_000004.12:g.183039683A>G, NC_000004.11:g.183960836A>C, NC_000004.11:g.183960836A>G, NR_003612.2:n.2019A>C, NR_003612.2:n.2019A>G, NR_003612.1:n.2019A>C, NR_003612.1:n.2019A>G

Select item 147107866915.

rs1471078669 [Homo sapiens]

Variant type:: SNV:
Alleles:: A>G
Chromosome:: no mapping
Canonical SPDI:

Select item 147043780216.

rs1470437802 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:183038466 (GRCh38)
4:183959619 (GRCh37)
Canonical SPDI:: NC_000004.12:183038465:T:C
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000004.12:g.183038466T>C, NC_000004.11:g.183959619T>C, NR_003612.2:n.802T>C, NR_003612.1:n.802T>C

Select item 146847531117.

rs1468475311 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 4:183037838 (GRCh38)
4:183958991 (GRCh37)
Canonical SPDI:: NC_000004.12:183037837:G:C
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.183037838G>C, NC_000004.11:g.183958991G>C, NR_003612.2:n.174G>C, NR_003612.1:n.174G>C

Select item 146738949418.

rs1467389494 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:183038208 (GRCh38)
4:183959361 (GRCh37)
Canonical SPDI:: NC_000004.12:183038207:C:T
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.183038208C>T, NC_000004.11:g.183959361C>T, NR_003612.2:n.544C>T, NR_003612.1:n.544C>T

Select item 146501797919.

rs1465017979 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 4:183037938 (GRCh38)
4:183959091 (GRCh37)
Canonical SPDI:: NC_000004.12:183037937:A:C
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.183037938A>C, NC_000004.11:g.183959091A>C, NR_003612.2:n.274A>C, NR_003612.1:n.274A>C

Select item 146432178620.

rs1464321786 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:183038027 (GRCh38)
4:183959180 (GRCh37)
Canonical SPDI:: NC_000004.12:183038026:G:A
Gene:: CIBAR1P2 (Varview), LOC107986328 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.183038027G>A, NC_000004.11:g.183959180G>A, NR_003612.2:n.363G>A, NR_003612.1:n.363G>A