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Links from Nucleotide

Items: 1 to 20 of 23282

1.

rs1491589100 [Homo sapiens]
    Variant type:
    DEL
    Alleles:
    TG>- [Show Flanks]
    Chromosome:
    22:36821537 (GRCh38)
    22:37217581 (GRCh37)
    Canonical SPDI:
    NC_000022.11:36821536:TG:
    Validated:
    by frequency,by cluster
    MAF:
    -=0.00068/3 (TOMMO)
    -=0.14404/7179 (GnomAD)
    HGVS:
    2.

    rs1491569870 [Homo sapiens]
      Variant type:
      INS
      Alleles:
      ->GGGGGGGGGGGT,GGT [Show Flanks]
      Chromosome:
      22:36821547 (GRCh38)
      22:37217592 (GRCh37)
      Canonical SPDI:
      NC_000022.11:36821547::GGGGGGGGGGGT,NC_000022.11:36821547::GGT
      Validated:
      by frequency
      MAF:
      GGGGGGGGGGGT=0.000008/1 (GnomAD)
      HGVS:
      3.

      rs1491568337 has merged into rs761758789 [Homo sapiens]
        Variant type:
        DELINS
        Alleles:
        GGGG>-,G,GG,GGG,GGGGG,GGGGGGGG [Show Flanks]
        Chromosome:
        22:36838206 (GRCh38)
        22:37234249 (GRCh37)
        Canonical SPDI:
        NC_000022.11:36838197:GGGGGGGGGGGG:GGGGGGGG,NC_000022.11:36838197:GGGGGGGGGGGG:GGGGGGGGG,NC_000022.11:36838197:GGGGGGGGGGGG:GGGGGGGGGG,NC_000022.11:36838197:GGGGGGGGGGGG:GGGGGGGGGGG,NC_000022.11:36838197:GGGGGGGGGGGG:GGGGGGGGGGGGG,NC_000022.11:36838197:GGGGGGGGGGGG:GGGGGGGGGGGGGGGG
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        GGGGGGGGG=0./0 (ALFA)
        -=0.00367/61 (TOMMO)
        -=0.175/7 (GENOME_DK)
        HGVS:
        4.

        rs1491558294 has merged into rs10605026 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          TT>-,T,TTTT [Show Flanks]
          Chromosome:
          22:36816045 (GRCh38)
          22:37212089 (GRCh37)
          Canonical SPDI:
          NC_000022.11:36816042:TTTT:TT,NC_000022.11:36816042:TTTT:TTT,NC_000022.11:36816042:TTTT:TTTTTT
          Gene:
          PVALB (Varview)
          Functional Consequence:
          intron_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          TTTT=0.141526/2308 (ALFA)
          -=0.030117/503 (TOMMO)
          -=0.052365/31 (NorthernSweden)
          -=0.125/5 (GENOME_DK)
          -=0.240699/30111 (GnomAD)
          -=0.280137/1794 (1000Genomes)
          HGVS:
          5.

          rs1491553710 [Homo sapiens]
            Variant type:
            DEL
            Alleles:
            CG>- [Show Flanks]
            Chromosome:
            22:36821518 (GRCh38)
            22:37217562 (GRCh37)
            Canonical SPDI:
            NC_000022.11:36821517:CG:
            Validated:
            by frequency,by alfa
            MAF:
            -=0./0 (ALFA)
            HGVS:
            6.

            rs1491543734 has merged into rs35896477 [Homo sapiens]
              Variant type:
              DELINS
              Alleles:
              TTTTT>-,TT,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTTT [Show Flanks]
              Chromosome:
              22:36792821 (GRCh38)
              22:37188865 (GRCh37)
              Canonical SPDI:
              NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:36792807:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              TTTTTTTTTTTTTTTTTTT=0./0 (ALFA)
              -=0.0999/385 (ALSPAC)
              T=0.345/1728 (1000Genomes)
              HGVS:
              NC_000022.11:g.36792821_36792825del, NC_000022.11:g.36792823_36792825del, NC_000022.11:g.36792824_36792825del, NC_000022.11:g.36792825del, NC_000022.11:g.36792825dup, NC_000022.11:g.36792824_36792825dup, NC_000022.11:g.36792823_36792825dup, NC_000022.11:g.36792822_36792825dup, NC_000022.11:g.36792821_36792825dup, NC_000022.11:g.36792818_36792825dup, NC_000022.10:g.37188865_37188869del, NC_000022.10:g.37188867_37188869del, NC_000022.10:g.37188868_37188869del, NC_000022.10:g.37188869del, NC_000022.10:g.37188869dup, NC_000022.10:g.37188868_37188869dup, NC_000022.10:g.37188867_37188869dup, NC_000022.10:g.37188866_37188869dup, NC_000022.10:g.37188865_37188869dup, NC_000022.10:g.37188862_37188869dup, NT_187631.1:g.13608_13612del, NT_187631.1:g.13610_13612del, NT_187631.1:g.13611_13612del, NT_187631.1:g.13612del, NT_187631.1:g.13612dup, NT_187631.1:g.13611_13612dup, NT_187631.1:g.13610_13612dup, NT_187631.1:g.13609_13612dup, NT_187631.1:g.13608_13612dup, NT_187631.1:g.13605_13612dup
              7.

              rs1491530807 has merged into rs59286661 [Homo sapiens]
                Variant type:
                DELINS
                Alleles:
                GGG>-,G,GG,GGGG,GGGGG,GGGGGG,GGGGGGG,GGGGGGGG,GGGGGGGGG,GGGGGGGGGG [Show Flanks]
                Chromosome:
                22:36821545 (GRCh38)
                22:37217589 (GRCh37)
                Canonical SPDI:
                NC_000022.11:36821537:GGGGGGGGGG:GGGGGGG,NC_000022.11:36821537:GGGGGGGGGG:GGGGGGGG,NC_000022.11:36821537:GGGGGGGGGG:GGGGGGGGG,NC_000022.11:36821537:GGGGGGGGGG:GGGGGGGGGGG,NC_000022.11:36821537:GGGGGGGGGG:GGGGGGGGGGGG,NC_000022.11:36821537:GGGGGGGGGG:GGGGGGGGGGGGG,NC_000022.11:36821537:GGGGGGGGGG:GGGGGGGGGGGGGG,NC_000022.11:36821537:GGGGGGGGGG:GGGGGGGGGGGGGGG,NC_000022.11:36821537:GGGGGGGGGG:GGGGGGGGGGGGGGGG,NC_000022.11:36821537:GGGGGGGGGG:GGGGGGGGGGGGGGGGG
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                GGGGGGGG=0./0 (ALFA)
                HGVS:
                NC_000022.11:g.36821545_36821547del, NC_000022.11:g.36821546_36821547del, NC_000022.11:g.36821547del, NC_000022.11:g.36821547dup, NC_000022.11:g.36821546_36821547dup, NC_000022.11:g.36821545_36821547dup, NC_000022.11:g.36821544_36821547dup, NC_000022.11:g.36821543_36821547dup, NC_000022.11:g.36821542_36821547dup, NC_000022.11:g.36821541_36821547dup, NC_000022.10:g.37217589_37217591del, NC_000022.10:g.37217590_37217591del, NC_000022.10:g.37217591del, NC_000022.10:g.37217591dup, NC_000022.10:g.37217590_37217591dup, NC_000022.10:g.37217589_37217591dup, NC_000022.10:g.37217588_37217591dup, NC_000022.10:g.37217587_37217591dup, NC_000022.10:g.37217586_37217591dup, NC_000022.10:g.37217585_37217591dup, NT_187631.1:g.42332_42334del, NT_187631.1:g.42333_42334del, NT_187631.1:g.42334del, NT_187631.1:g.42334dup, NT_187631.1:g.42333_42334dup, NT_187631.1:g.42332_42334dup, NT_187631.1:g.42331_42334dup, NT_187631.1:g.42330_42334dup, NT_187631.1:g.42329_42334dup, NT_187631.1:g.42328_42334dup
                8.

                rs1491529290 has merged into rs138080167 [Homo sapiens]
                  Variant type:
                  DELINS
                  Alleles:
                  GAGAGAGA>-,GA,GAGA,GAGAGA,GAGAGAGAGA,GAGAGAGAGAGA [Show Flanks]
                  Chromosome:
                  22:36844696 (GRCh38)
                  22:37240739 (GRCh37)
                  Canonical SPDI:
                  NC_000022.11:36844684:AGAGAGAGAGAGAGAGAGA:AGAGAGAGAGA,NC_000022.11:36844684:AGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGA,NC_000022.11:36844684:AGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGA,NC_000022.11:36844684:AGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGA,NC_000022.11:36844684:AGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGA,NC_000022.11:36844684:AGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGA
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  AGAGAGAGAGAGAGA=0./0 (ALFA)
                  -=0.000155/41 (TOPMED)
                  AG=0.051118/256 (1000Genomes)
                  HGVS:
                  9.

                  rs1491475094 [Homo sapiens]
                    Variant type:
                    DELINS
                    Alleles:
                    ->CTTCTTCT [Show Flanks]
                    Chromosome:
                    22:36831765 (GRCh38)
                    22:37227809 (GRCh37)
                    Canonical SPDI:
                    NC_000022.11:36831765:TCTTCTTCT:TCTTCTTCTCTTCTTCT
                    Validated:
                    by frequency,by alfa
                    MAF:
                    TCTTCTTCTCTTCTTCT=0./0 (ALFA)
                    HGVS:
                    10.

                    rs1491469326 has merged into rs60843863 [Homo sapiens]
                      Variant type:
                      DELINS
                      Alleles:
                      AAAAAAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA [Show Flanks]
                      Chromosome:
                      22:36802618 (GRCh38)
                      22:37198662 (GRCh37)
                      Canonical SPDI:
                      NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000022.11:36802603:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
                      Gene:
                      PVALB (Varview)
                      Functional Consequence:
                      intron_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      AAAAAAAAAAAAAAA=0./0 (ALFA)
                      HGVS:
                      NC_000022.11:g.36802618_36802626del, NC_000022.11:g.36802619_36802626del, NC_000022.11:g.36802620_36802626del, NC_000022.11:g.36802621_36802626del, NC_000022.11:g.36802622_36802626del, NC_000022.11:g.36802624_36802626del, NC_000022.11:g.36802625_36802626del, NC_000022.11:g.36802626del, NC_000022.11:g.36802626dup, NC_000022.11:g.36802625_36802626dup, NC_000022.11:g.36802624_36802626dup, NC_000022.11:g.36802623_36802626dup, NC_000022.11:g.36802622_36802626dup, NC_000022.11:g.36802621_36802626dup, NC_000022.11:g.36802620_36802626dup, NC_000022.10:g.37198662_37198670del, NC_000022.10:g.37198663_37198670del, NC_000022.10:g.37198664_37198670del, NC_000022.10:g.37198665_37198670del, NC_000022.10:g.37198666_37198670del, NC_000022.10:g.37198668_37198670del, NC_000022.10:g.37198669_37198670del, NC_000022.10:g.37198670del, NC_000022.10:g.37198670dup, NC_000022.10:g.37198669_37198670dup, NC_000022.10:g.37198668_37198670dup, NC_000022.10:g.37198667_37198670dup, NC_000022.10:g.37198666_37198670dup, NC_000022.10:g.37198665_37198670dup, NC_000022.10:g.37198664_37198670dup, NT_187631.1:g.23405_23413del, NT_187631.1:g.23406_23413del, NT_187631.1:g.23407_23413del, NT_187631.1:g.23408_23413del, NT_187631.1:g.23409_23413del, NT_187631.1:g.23411_23413del, NT_187631.1:g.23412_23413del, NT_187631.1:g.23413del, NT_187631.1:g.23413dup, NT_187631.1:g.23412_23413dup, NT_187631.1:g.23411_23413dup, NT_187631.1:g.23410_23413dup, NT_187631.1:g.23409_23413dup, NT_187631.1:g.23408_23413dup, NT_187631.1:g.23407_23413dup
                      11.

                      rs1491469301 [Homo sapiens]
                        Variant type:
                        DEL
                        Alleles:
                        AT>- [Show Flanks]
                        Chromosome:
                        22:36792807 (GRCh38)
                        22:37188851 (GRCh37)
                        Canonical SPDI:
                        NC_000022.11:36792806:AT:
                        Validated:
                        by frequency,by alfa
                        MAF:
                        -=0./0 (ALFA)
                        -=0.000009/1 (GnomAD)
                        HGVS:
                        12.

                        rs1491452335 [Homo sapiens]
                          Variant type:
                          DELINS
                          Alleles:
                          ->G [Show Flanks]
                          Chromosome:
                          22:36836925 (GRCh38)
                          22:37232969 (GRCh37)
                          Canonical SPDI:
                          NC_000022.11:36836925:GGGGGG:GGGGGGG
                          Validated:
                          by frequency,by alfa
                          MAF:
                          GGGGGGG=0./0 (ALFA)
                          G=0.000004/1 (TOPMED)
                          HGVS:
                          13.

                          rs1491440637 [Homo sapiens]
                            Variant type:
                            DEL
                            Alleles:
                            TT>- [Show Flanks]
                            Chromosome:
                            22:36821536 (GRCh38)
                            22:37217580 (GRCh37)
                            Canonical SPDI:
                            NC_000022.11:36821535:TT:
                            Validated:
                            by frequency,by alfa
                            MAF:
                            -=0./0 (ALFA)
                            HGVS:
                            14.

                            rs1491374432 [Homo sapiens]
                              Variant type:
                              DEL
                              Alleles:
                              GT>- [Show Flanks]
                              Chromosome:
                              22:36797221 (GRCh38)
                              22:37193265 (GRCh37)
                              Canonical SPDI:
                              NC_000022.11:36797220:GT:
                              Validated:
                              by frequency,by alfa
                              MAF:
                              -=0.000356/5 (ALFA)
                              -=0.000116/15 (GnomAD)
                              HGVS:
                              15.

                              rs1491366270 [Homo sapiens]
                                Variant type:
                                DELINS
                                Alleles:
                                ->GT,GTGT,GTGTGT,GTGTGTGT,GTGTGTGTGT,GTGTGTGTGTGT [Show Flanks]
                                Chromosome:
                                22:36816043 (GRCh38)
                                22:37212088 (GRCh37)
                                Canonical SPDI:
                                NC_000022.11:36816043:T:TGT,NC_000022.11:36816043:T:TGTGT,NC_000022.11:36816043:T:TGTGTGT,NC_000022.11:36816043:T:TGTGTGTGT,NC_000022.11:36816043:T:TGTGTGTGTGT,NC_000022.11:36816043:T:TGTGTGTGTGTGT
                                Gene:
                                PVALB (Varview)
                                Functional Consequence:
                                intron_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                TGTGT=0./0 (ALFA)
                                HGVS:
                                16.

                                rs1491242852 [Homo sapiens]
                                  Variant type:
                                  DELINS
                                  Alleles:
                                  ->AGG,TGG [Show Flanks]
                                  Chromosome:
                                  22:36821538 (GRCh38)
                                  22:37217583 (GRCh37)
                                  Canonical SPDI:
                                  NC_000022.11:36821538:GG:GGAGG,NC_000022.11:36821538:GG:GGTGG
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  GGAGG=0.00017/2 (ALFA)
                                  GGT=0.00004/1 (TOMMO)
                                  GGA=0.00006/4 (GnomAD)
                                  HGVS:
                                  17.

                                  rs1491229528 [Homo sapiens]
                                    Variant type:
                                    DEL
                                    Alleles:
                                    GC>- [Show Flanks]
                                    Chromosome:
                                    22:36794386 (GRCh38)
                                    22:37190430 (GRCh37)
                                    Canonical SPDI:
                                    NC_000022.11:36794385:GC:
                                    Validated:
                                    by frequency,by alfa
                                    MAF:
                                    -=0./0 (ALFA)
                                    -=0.00002/1 (GnomAD)
                                    HGVS:
                                    18.

                                    rs1491222450 [Homo sapiens]
                                      Variant type:
                                      INS
                                      Alleles:
                                      ->CC,CTTCTTCTTCTTCC,CTTCTTCTTCTTCCTCC [Show Flanks]
                                      Chromosome:
                                      22:36831774 (GRCh38)
                                      22:37227818 (GRCh37)
                                      Canonical SPDI:
                                      NC_000022.11:36831774::CC,NC_000022.11:36831774::CTTCTTCTTCTTCC,NC_000022.11:36831774::CTTCTTCTTCTTCCTCC
                                      Validated:
                                      by frequency,by alfa,by cluster
                                      MAF:
                                      CTTCTTCTTCTTCC=0./0 (ALFA)
                                      CC=0.00015/2 (TOMMO)
                                      HGVS:
                                      19.

                                      rs1491220774 [Homo sapiens]
                                        Variant type:
                                        DEL
                                        Alleles:
                                        GT>- [Show Flanks]
                                        Chromosome:
                                        22:36811425 (GRCh38)
                                        22:37207469 (GRCh37)
                                        Canonical SPDI:
                                        NC_000022.11:36811424:GT:
                                        Gene:
                                        PVALB (Varview)
                                        Functional Consequence:
                                        intron_variant
                                        Validated:
                                        by frequency,by alfa,by cluster
                                        MAF:
                                        -=0./0 (ALFA)
                                        -=0.000004/1 (TOPMED)
                                        -=0.000007/1 (GnomAD)
                                        HGVS:
                                        20.

                                        rs1491186808 [Homo sapiens]
                                          Variant type:
                                          DELINS
                                          Alleles:
                                          ->GTGTGTGTGTGTGGTGTATGTATGTGTATGTGTGTGTGTG [Show Flanks]
                                          Chromosome:
                                          22:36838308 (GRCh38)
                                          22:37234352 (GRCh37)
                                          Canonical SPDI:
                                          NC_000022.11:36838308:GTGTGTGTGTGTGGTGTATGTATGTGTATGTGTGTGTGTG:GTGTGTGTGTGTGGTGTATGTATGTGTATGTGTGTGTGTGGTGTGTGTGTGTGGTGTATGTATGTGTATGTGTGTGTGTG
                                          Validated:
                                          by frequency
                                          MAF:
                                          GTGTGTGTGTGTGGTGTATGTATGTGTATGTGTGTGTGTG=0.000015/2 (GnomAD)
                                          HGVS:

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