SNP Links for Nucleotide (Select 564112231) - SNP

Links from Nucleotide

Items: 1 to 20 of 261

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Select item 14900746671.

rs1490074667 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 10:25668276 (GRCh38)
10:25957205 (GRCh37)
Canonical SPDI:: NC_000010.11:25668275:C:A
Gene:: LINC00836 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.25668276C>A, NC_000010.10:g.25957205C>A, NR_108069.1:n.323C>A

Select item 14899402262.

rs1489940226 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:25682529 (GRCh38)
10:25971458 (GRCh37)
Canonical SPDI:: NC_000010.11:25682528:C:T
Gene:: LINC00836 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000010.11:g.25682529C>T, NC_000010.10:g.25971458C>T, NR_108069.1:n.386C>T

Select item 14798707033.

rs1479870703 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 10:25683120 (GRCh38)
10:25972049 (GRCh37)
Canonical SPDI:: NC_000010.11:25683119:A:C
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000035/1 (TOMMO)
HGVS:: NC_000010.11:g.25683120A>C, NC_000010.10:g.25972049A>C, NR_108069.1:n.977A>C

Select item 14780269284.

rs1478026928 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 10:25652971 (GRCh38)
10:25941900 (GRCh37)
Canonical SPDI:: NC_000010.11:25652970:G:A,NC_000010.11:25652970:G:T
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000010.11:g.25652971G>A, NC_000010.11:g.25652971G>T, NC_000010.10:g.25941900G>A, NC_000010.10:g.25941900G>T, NR_108067.1:n.191G>A, NR_108067.1:n.191G>T, NR_108069.1:n.191G>A, NR_108069.1:n.191G>T

Select item 14738293815.

rs1473829381 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:25668244 (GRCh38)
10:25957173 (GRCh37)
Canonical SPDI:: NC_000010.11:25668243:T:C
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000010.11:g.25668244T>C, NC_000010.10:g.25957173T>C, NR_108069.1:n.291T>C

Select item 14736095436.

rs1473609543 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:25682915 (GRCh38)
10:25971844 (GRCh37)
Canonical SPDI:: NC_000010.11:25682914:G:A
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000054/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
A=0.000223/1 (Estonian)
HGVS:: NC_000010.11:g.25682915G>A, NC_000010.10:g.25971844G>A, NR_108069.1:n.772G>A

Select item 14726001797.

rs1472600179 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:25682729 (GRCh38)
10:25971658 (GRCh37)
Canonical SPDI:: NC_000010.11:25682728:C:T
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000010.11:g.25682729C>T, NC_000010.10:g.25971658C>T, NR_108069.1:n.586C>T

Select item 14708527578.

rs1470852757 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:25682710 (GRCh38)
10:25971639 (GRCh37)
Canonical SPDI:: NC_000010.11:25682709:C:T
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.25682710C>T, NC_000010.10:g.25971639C>T, NR_108069.1:n.567C>T

Select item 14616564309.

rs1461656430 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:25682817 (GRCh38)
10:25971746 (GRCh37)
Canonical SPDI:: NC_000010.11:25682816:C:T
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000010.11:g.25682817C>T, NC_000010.10:g.25971746C>T, NR_108069.1:n.674C>T

Select item 145261503110.

rs1452615031 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 10:25683354 (GRCh38)
10:25972283 (GRCh37)
Canonical SPDI:: NC_000010.11:25683353:T:G
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.25683354T>G, NC_000010.10:g.25972283T>G, NR_108069.1:n.1211T>G

Select item 145081644311.

rs1450816443 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 10:25683371 (GRCh38)
10:25972300 (GRCh37)
Canonical SPDI:: NC_000010.11:25683370:C:A,NC_000010.11:25683370:C:T
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.25683371C>A, NC_000010.11:g.25683371C>T, NC_000010.10:g.25972300C>A, NC_000010.10:g.25972300C>T, NR_108069.1:n.1228C>A, NR_108069.1:n.1228C>T

Select item 144884844412.

rs1448848444 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:25683228 (GRCh38)
10:25972157 (GRCh37)
Canonical SPDI:: NC_000010.11:25683227:T:C
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.25683228T>C, NC_000010.10:g.25972157T>C, NR_108069.1:n.1085T>C

Select item 144860413613.

rs1448604136 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:25683297 (GRCh38)
10:25972226 (GRCh37)
Canonical SPDI:: NC_000010.11:25683296:A:G
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.25683297A>G, NC_000010.10:g.25972226A>G, NR_108069.1:n.1154A>G

Select item 144438675214.

rs1444386752 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 10:25651758 (GRCh38)
10:25940687 (GRCh37)
Canonical SPDI:: NC_000010.11:25651757:G:A,NC_000010.11:25651757:G:C
Gene:: LINC00836 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000010.11:g.25651758G>A, NC_000010.11:g.25651758G>C, NC_000010.10:g.25940687G>A, NC_000010.10:g.25940687G>C, NR_108067.1:n.47G>A, NR_108067.1:n.47G>C, NR_108068.1:n.47G>A, NR_108068.1:n.47G>C, NR_108069.1:n.47G>A, NR_108069.1:n.47G>C

Select item 143893535515.

rs1438935355 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 10:25683192 (GRCh38)
10:25972121 (GRCh37)
Canonical SPDI:: NC_000010.11:25683191:T:C,NC_000010.11:25683191:T:G
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000010.11:g.25683192T>C, NC_000010.11:g.25683192T>G, NC_000010.10:g.25972121T>C, NC_000010.10:g.25972121T>G, NR_108069.1:n.1049T>C, NR_108069.1:n.1049T>G

Select item 143719275716.

rs1437192757 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:25668302 (GRCh38)
10:25957231 (GRCh37)
Canonical SPDI:: NC_000010.11:25668301:T:C
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000010.11:g.25668302T>C, NC_000010.10:g.25957231T>C, NR_108069.1:n.349T>C

Select item 143573885717.

rs1435738857 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 10:25652909 (GRCh38)
10:25941838 (GRCh37)
Canonical SPDI:: NC_000010.11:25652908:A:T
Gene:: LINC00836 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.25652909A>T, NC_000010.10:g.25941838A>T, NR_108067.1:n.129A>T, NR_108069.1:n.129A>T

Select item 142899231218.

rs1428992312 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTGACAG>- [Show Flanks]
Chromosome:: 10:25682957 (GRCh38)
10:25971886 (GRCh37)
Canonical SPDI:: NC_000010.11:25682950:TGACAGTTGACAG:TGACAG
Gene:: LINC00836 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGACAG=0.001026/19 (ALFA)
-=0.00011/29 (TOPMED)
-=0.000468/3 (1000Genomes)
-=0.00097/136 (GnomAD)
-=0.004018/18 (Estonian)
HGVS:: NC_000010.11:g.25682957_25682963del, NC_000010.10:g.25971886_25971892del, NR_108069.1:n.814_820del

Select item 142515918719.

rs1425159187 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 10:25682782 (GRCh38)
10:25971711 (GRCh37)
Canonical SPDI:: NC_000010.11:25682781:G:T
Gene:: LINC00836 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000010.11:g.25682782G>T, NC_000010.10:g.25971711G>T, NR_108069.1:n.639G>T

Select item 142176822220.

rs1421768222 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:25682933 (GRCh38)
10:25971862 (GRCh37)
Canonical SPDI:: NC_000010.11:25682932:A:G
Gene:: LINC00836 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.25682933A>G, NC_000010.10:g.25971862A>G, NR_108069.1:n.790A>G

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