SNP Links for Nucleotide (Select 559767251) - SNP

Links from Nucleotide

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Select item 14851359761.

rs1485135976 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:76523764 (GRCh38)
8:77435999 (GRCh37)
Canonical SPDI:: NC_000008.11:76523763:G:A
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.76523764G>A, NC_000008.10:g.77435999G>A, NR_105006.1:n.1071G>A

Select item 14836725742.

rs1483672574 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:76433650 (GRCh38)
8:77345885 (GRCh37)
Canonical SPDI:: NC_000008.11:76433649:G:A,NC_000008.11:76433649:G:C
Gene:: LINC01111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000054/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000008.11:g.76433650G>A, NC_000008.11:g.76433650G>C, NC_000008.10:g.77345885G>A, NC_000008.10:g.77345885G>C, NR_105006.1:n.132G>A, NR_105006.1:n.132G>C

Select item 14816424833.

rs1481642483 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:76523560 (GRCh38)
8:77435795 (GRCh37)
Canonical SPDI:: NC_000008.11:76523559:G:A
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.76523560G>A, NC_000008.10:g.77435795G>A, NR_105006.1:n.867G>A

Select item 14813643234.

rs1481364323 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:76523335 (GRCh38)
8:77435570 (GRCh37)
Canonical SPDI:: NC_000008.11:76523334:A:G
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.76523335A>G, NC_000008.10:g.77435570A>G, NR_105006.1:n.642A>G

Select item 14779267265.

rs1477926726 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:76433689 (GRCh38)
8:77345924 (GRCh37)
Canonical SPDI:: NC_000008.11:76433688:A:C
Gene:: LINC01111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.76433689A>C, NC_000008.10:g.77345924A>C, NR_105006.1:n.171A>C

Select item 14759287866.

rs1475928786 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:76524334 (GRCh38)
8:77436569 (GRCh37)
Canonical SPDI:: NC_000008.11:76524333:A:C
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.76524334A>C, NC_000008.10:g.77436569A>C, NR_105006.1:n.1641A>C

Select item 14695124397.

rs1469512439 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:76524331 (GRCh38)
8:77436566 (GRCh37)
Canonical SPDI:: NC_000008.11:76524330:A:C
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000046/2 (GnomAD)
HGVS:: NC_000008.11:g.76524331A>C, NC_000008.10:g.77436566A>C, NR_105006.1:n.1638A>C

Select item 14687781638.

rs1468778163 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 8:76523581 (GRCh38)
8:77435817 (GRCh37)
Canonical SPDI:: NC_000008.11:76523581:AAAAA:AAAAAA
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAA=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.76523586dup, NC_000008.10:g.77435821dup, NR_105006.1:n.893dup

Select item 14685582469.

rs1468558246 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 8:76406680 (GRCh38)
8:77318915 (GRCh37)
Canonical SPDI:: NC_000008.11:76406679:T:A
Gene:: LINC01111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000008.11:g.76406680T>A, NC_000008.10:g.77318915T>A, NR_105006.1:n.27T>A

Select item 146837614110.

rs1468376141 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:76523677 (GRCh38)
8:77435912 (GRCh37)
Canonical SPDI:: NC_000008.11:76523676:G:A
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.76523677G>A, NC_000008.10:g.77435912G>A, NR_105006.1:n.984G>A

Select item 146421816711.

rs1464218167 has merged into rs1165203329 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATAATA>-,ATA,ATAATAATA [Show Flanks]
Chromosome:: 8:76524127 (GRCh38)
8:77436362 (GRCh37)
Canonical SPDI:: NC_000008.11:76524119:AATAATAATAATA:AATAATA,NC_000008.11:76524119:AATAATAATAATA:AATAATAATA,NC_000008.11:76524119:AATAATAATAATA:AATAATAATAATAATA
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AATAATAATAATAATA=0./0 (ALFA)
-=0.000019/5 (TOPMED)
-=0.000035/1 (TOMMO)
HGVS:: NC_000008.11:g.76524121ATA[2], NC_000008.11:g.76524121ATA[3], NC_000008.11:g.76524121ATA[5], NC_000008.10:g.77436356ATA[2], NC_000008.10:g.77436356ATA[3], NC_000008.10:g.77436356ATA[5], NR_105006.1:n.1428ATA[2], NR_105006.1:n.1428ATA[3], NR_105006.1:n.1428ATA[5]

Select item 145476344712.

rs1454763447 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:76523878 (GRCh38)
8:77436113 (GRCh37)
Canonical SPDI:: NC_000008.11:76523877:C:T
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000023/6 (TOPMED)
HGVS:: NC_000008.11:g.76523878C>T, NC_000008.10:g.77436113C>T, NR_105006.1:n.1185C>T

Select item 145302222913.

rs1453022229 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 8:76433646 (GRCh38)
8:77345881 (GRCh37)
Canonical SPDI:: NC_000008.11:76433645:A:C,NC_000008.11:76433645:A:G,NC_000008.11:76433645:A:T
Gene:: LINC01111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00014/2 (TOMMO)
HGVS:: NC_000008.11:g.76433646A>C, NC_000008.11:g.76433646A>G, NC_000008.11:g.76433646A>T, NC_000008.10:g.77345881A>C, NC_000008.10:g.77345881A>G, NC_000008.10:g.77345881A>T, NR_105006.1:n.128A>C, NR_105006.1:n.128A>G, NR_105006.1:n.128A>T

Select item 145238616614.

rs1452386166 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:76524353 (GRCh38)
8:77436588 (GRCh37)
Canonical SPDI:: NC_000008.11:76524352:A:G
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.76524353A>G, NC_000008.10:g.77436588A>G, NR_105006.1:n.1660A>G

Select item 145225260915.

rs1452252609 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:76406675 (GRCh38)
8:77318910 (GRCh37)
Canonical SPDI:: NC_000008.11:76406674:G:A
Gene:: LINC01111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
HGVS:: NC_000008.11:g.76406675G>A, NC_000008.10:g.77318910G>A, NR_105006.1:n.22G>A

Select item 145201613316.

rs1452016133 has merged into rs1003600624 [Homo sapiens]

Variant type:: DELINS
Alleles:: CAGAATGTG>-,CAGAATGTGCAGAATGTG [Show Flanks]
Chromosome:: 8:76510416 (GRCh38)
8:77422651 (GRCh37)
Canonical SPDI:: NC_000008.11:76510401:ATGTGCAGAATGTGCAGAATGTG:ATGTGCAGAATGTG,NC_000008.11:76510401:ATGTGCAGAATGTGCAGAATGTG:ATGTGCAGAATGTGCAGAATGTGCAGAATGTG
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATGTGCAGAATGTGCAGAATGTGCAGAATGTG=0./0 (ALFA)
HGVS:: NC_000008.11:g.76510407CAGAATGTG[1], NC_000008.11:g.76510407CAGAATGTG[3], NC_000008.10:g.77422642CAGAATGTG[1], NC_000008.10:g.77422642CAGAATGTG[3], NR_105006.1:n.349CAGAATGTG[1], NR_105006.1:n.349CAGAATGTG[3]

Select item 144372630417.

rs1443726304 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:76523498 (GRCh38)
8:77435733 (GRCh37)
Canonical SPDI:: NC_000008.11:76523497:A:C
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000008.11:g.76523498A>C, NC_000008.10:g.77435733A>C, NR_105006.1:n.805A>C

Select item 144355135018.

rs1443551350 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 8:76406766 (GRCh38)
8:77319001 (GRCh37)
Canonical SPDI:: NC_000008.11:76406765:C:A,NC_000008.11:76406765:C:G
Gene:: LINC01111 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000008.11:g.76406766C>A, NC_000008.11:g.76406766C>G, NC_000008.10:g.77319001C>A, NC_000008.10:g.77319001C>G, NR_105006.1:n.113C>A, NR_105006.1:n.113C>G

Select item 144304322119.

rs1443043221 has merged into rs34760266 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 8:76524340 (GRCh38)
8:77436575 (GRCh37)
Canonical SPDI:: NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:76524330:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000008.11:g.76524340_76524356del, NC_000008.11:g.76524342_76524356del, NC_000008.11:g.76524343_76524356del, NC_000008.11:g.76524344_76524356del, NC_000008.11:g.76524345_76524356del, NC_000008.11:g.76524346_76524356del, NC_000008.11:g.76524347_76524356del, NC_000008.11:g.76524348_76524356del, NC_000008.11:g.76524349_76524356del, NC_000008.11:g.76524350_76524356del, NC_000008.11:g.76524351_76524356del, NC_000008.11:g.76524352_76524356del, NC_000008.11:g.76524353_76524356del, NC_000008.11:g.76524354_76524356del, NC_000008.11:g.76524355_76524356del, NC_000008.11:g.76524356del, NC_000008.11:g.76524356dup, NC_000008.11:g.76524355_76524356dup, NC_000008.11:g.76524354_76524356dup, NC_000008.11:g.76524353_76524356dup, NC_000008.11:g.76524352_76524356dup, NC_000008.11:g.76524350_76524356dup, NC_000008.11:g.76524349_76524356dup, NC_000008.11:g.76524347_76524356dup, NC_000008.11:g.76524335_76524356dup, NC_000008.10:g.77436575_77436591del, NC_000008.10:g.77436577_77436591del, NC_000008.10:g.77436578_77436591del, NC_000008.10:g.77436579_77436591del, NC_000008.10:g.77436580_77436591del, NC_000008.10:g.77436581_77436591del, NC_000008.10:g.77436582_77436591del, NC_000008.10:g.77436583_77436591del, NC_000008.10:g.77436584_77436591del, NC_000008.10:g.77436585_77436591del, NC_000008.10:g.77436586_77436591del, NC_000008.10:g.77436587_77436591del, NC_000008.10:g.77436588_77436591del, NC_000008.10:g.77436589_77436591del, NC_000008.10:g.77436590_77436591del, NC_000008.10:g.77436591del, NC_000008.10:g.77436591dup, NC_000008.10:g.77436590_77436591dup, NC_000008.10:g.77436589_77436591dup, NC_000008.10:g.77436588_77436591dup, NC_000008.10:g.77436587_77436591dup, NC_000008.10:g.77436585_77436591dup, NC_000008.10:g.77436584_77436591dup, NC_000008.10:g.77436582_77436591dup, NC_000008.10:g.77436570_77436591dup, NR_105006.1:n.1647_1663del, NR_105006.1:n.1649_1663del, NR_105006.1:n.1650_1663del, NR_105006.1:n.1651_1663del, NR_105006.1:n.1652_1663del, NR_105006.1:n.1653_1663del, NR_105006.1:n.1654_1663del, NR_105006.1:n.1655_1663del, NR_105006.1:n.1656_1663del, NR_105006.1:n.1657_1663del, NR_105006.1:n.1658_1663del, NR_105006.1:n.1659_1663del, NR_105006.1:n.1660_1663del, NR_105006.1:n.1661_1663del, NR_105006.1:n.1662_1663del, NR_105006.1:n.1663del, NR_105006.1:n.1663dup, NR_105006.1:n.1662_1663dup, NR_105006.1:n.1661_1663dup, NR_105006.1:n.1660_1663dup, NR_105006.1:n.1659_1663dup, NR_105006.1:n.1657_1663dup, NR_105006.1:n.1656_1663dup, NR_105006.1:n.1654_1663dup, NR_105006.1:n.1642_1663dup

Select item 144200344720.

rs1442003447 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 8:76523350 (GRCh38)
8:77435585 (GRCh37)
Canonical SPDI:: NC_000008.11:76523349:C:A,NC_000008.11:76523349:C:T
Gene:: LINC01111 (Varview), LOC107986952 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.76523350C>A, NC_000008.11:g.76523350C>T, NC_000008.10:g.77435585C>A, NC_000008.10:g.77435585C>T, NR_105006.1:n.657C>A, NR_105006.1:n.657C>T

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