SNP Links for Nucleotide (Select 538260612) - SNP

Links from Nucleotide

Items: 1 to 20 of 438

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Select item 14871185421.

rs1487118542 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:71098169 (GRCh38)
17:69094310 (GRCh37)
Canonical SPDI:: NC_000017.11:71098168:C:T
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000342/1 (KOREAN)
HGVS:: NC_000017.11:g.71098169C>T, NC_000017.10:g.69094310C>T, NR_104152.1:n.1667G>A

Select item 14870321142.

rs1487032114 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 17:71098239 (GRCh38)
17:69094380 (GRCh37)
Canonical SPDI:: NC_000017.11:71098238:T:C,NC_000017.11:71098238:T:G
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.71098239T>C, NC_000017.11:g.71098239T>G, NC_000017.10:g.69094380T>C, NC_000017.10:g.69094380T>G, NR_104152.1:n.1597A>G, NR_104152.1:n.1597A>C

Select item 14864050233.

rs1486405023 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 17:71098523 (GRCh38)
17:69094664 (GRCh37)
Canonical SPDI:: NC_000017.11:71098522:A:C,NC_000017.11:71098522:A:G
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.71098523A>C, NC_000017.11:g.71098523A>G, NC_000017.10:g.69094664A>C, NC_000017.10:g.69094664A>G, NR_104152.1:n.1313T>G, NR_104152.1:n.1313T>C

Select item 14862744944.

rs1486274494 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 17:71099127 (GRCh38)
17:69095268 (GRCh37)
Canonical SPDI:: NC_000017.11:71099126:T:C,NC_000017.11:71099126:T:G
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.71099127T>C, NC_000017.11:g.71099127T>G, NC_000017.10:g.69095268T>C, NC_000017.10:g.69095268T>G, NR_104152.1:n.709A>G, NR_104152.1:n.709A>C

Select item 14855183845.

rs1485518384 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 17:71099080 (GRCh38)
17:69095221 (GRCh37)
Canonical SPDI:: NC_000017.11:71099079:T:A
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.71099080T>A, NC_000017.10:g.69095221T>A, NR_104152.1:n.756A>T

Select item 14850624466.

rs1485062446 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:71098275 (GRCh38)
17:69094416 (GRCh37)
Canonical SPDI:: NC_000017.11:71098274:T:C
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000017.11:g.71098275T>C, NC_000017.10:g.69094416T>C, NR_104152.1:n.1561A>G

Select item 14837936397.

rs1483793639 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 17:71099513 (GRCh38)
17:69095654 (GRCh37)
Canonical SPDI:: NC_000017.11:71099512:G:A,NC_000017.11:71099512:G:T
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000017.11:g.71099513G>A, NC_000017.11:g.71099513G>T, NC_000017.10:g.69095654G>A, NC_000017.10:g.69095654G>T, NR_104152.1:n.323C>T, NR_104152.1:n.323C>A

Select item 14834653968.

rs1483465396 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:71098399 (GRCh38)
17:69094540 (GRCh37)
Canonical SPDI:: NC_000017.11:71098398:A:G
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.71098399A>G, NC_000017.10:g.69094540A>G, NR_104152.1:n.1437T>C

Select item 14771445339.

rs1477144533 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:71098948 (GRCh38)
17:69095089 (GRCh37)
Canonical SPDI:: NC_000017.11:71098947:A:G
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.71098948A>G, NC_000017.10:g.69095089A>G, NR_104152.1:n.888T>C

Select item 147502726210.

rs1475027262 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:71098797 (GRCh38)
17:69094938 (GRCh37)
Canonical SPDI:: NC_000017.11:71098796:G:A
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.71098797G>A, NC_000017.10:g.69094938G>A, NR_104152.1:n.1039C>T

Select item 147305228211.

rs1473052282 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:71098195 (GRCh38)
17:69094336 (GRCh37)
Canonical SPDI:: NC_000017.11:71098194:T:C
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000017.11:g.71098195T>C, NC_000017.10:g.69094336T>C, NR_104152.1:n.1641A>G

Select item 147255008012.

rs1472550080 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:71097996 (GRCh38)
17:69094137 (GRCh37)
Canonical SPDI:: NC_000017.11:71097995:G:A
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.71097996G>A, NC_000017.10:g.69094137G>A, NR_104152.1:n.1840C>T

Select item 146837386913.

rs1468373869 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:71098379 (GRCh38)
17:69094520 (GRCh37)
Canonical SPDI:: NC_000017.11:71098378:A:G
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.71098379A>G, NC_000017.10:g.69094520A>G, NR_104152.1:n.1457T>C

Select item 146745007614.

rs1467450076 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 17:71098223 (GRCh38)
17:69094364 (GRCh37)
Canonical SPDI:: NC_000017.11:71098222:CCCC:CCC
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCC=0.000108/2 (ALFA)
-=0.000057/15 (TOPMED)
-=0.000071/10 (GnomAD)
-=0.000223/1 (Estonian)
HGVS:: NC_000017.11:g.71098226del, NC_000017.10:g.69094367del, NR_104152.1:n.1613del

Select item 146652018315.

rs1466520183 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:71097941 (GRCh38)
17:69094082 (GRCh37)
Canonical SPDI:: NC_000017.11:71097940:G:A
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000017.11:g.71097941G>A, NC_000017.10:g.69094082G>A, NR_104152.1:n.1895C>T

Select item 146481564916.

rs1464815649 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:71202131 (GRCh38)
17:69198272 (GRCh37)
Canonical SPDI:: NC_000017.11:71202130:G:A
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000017.11:g.71202131G>A, NC_000017.10:g.69198272G>A, NR_104152.1:n.49C>T

Select item 146352916717.

rs1463529167 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:71098356 (GRCh38)
17:69094497 (GRCh37)
Canonical SPDI:: NC_000017.11:71098355:C:A
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.71098356C>A, NC_000017.10:g.69094497C>A, NR_104152.1:n.1480G>T

Select item 146271708418.

rs1462717084 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 17:71098692 (GRCh38)
17:69094833 (GRCh37)
Canonical SPDI:: NC_000017.11:71098691:T:A
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.71098692T>A, NC_000017.10:g.69094833T>A, NR_104152.1:n.1144A>T

Select item 146219367219.

rs1462193672 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:71098243 (GRCh38)
17:69094384 (GRCh37)
Canonical SPDI:: NC_000017.11:71098242:T:C
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.71098243T>C, NC_000017.10:g.69094384T>C, NR_104152.1:n.1593A>G

Select item 146083152020.

rs1460831520 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:71132396 (GRCh38)
17:69128537 (GRCh37)
Canonical SPDI:: NC_000017.11:71132395:T:C
Gene:: CASC17 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000106/3 (TOMMO)
C=0.001092/2 (Korea1K)
HGVS:: NC_000017.11:g.71132396T>C, NC_000017.10:g.69128537T>C, NR_104152.1:n.211A>G

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