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Links from Nucleotide

Items: 1 to 20 of 547

1.

rs1490769188 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    G>A [Show Flanks]
    Chromosome:
    14:23556864 (GRCh38)
    14:24026073 (GRCh37)
    Canonical SPDI:
    NC_000014.9:23556863:G:A
    Gene:
    THTPA (Varview), ZFHX2 (Varview)
    Functional Consequence:
    2KB_upstream_variant,missense_variant,coding_sequence_variant,intron_variant,upstream_transcript_variant
    Validated:
    by frequency
    MAF:
    A=0.000004/1 (GnomAD_exomes)
    HGVS:
    3.

    rs1483309684 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      C>G [Show Flanks]
      Chromosome:
      14:23559164 (GRCh38)
      14:24028373 (GRCh37)
      Canonical SPDI:
      NC_000014.9:23559163:C:G
      Gene:
      AP1G2 (Varview), THTPA (Varview), AP1G2-AS1 (Varview)
      Functional Consequence:
      2KB_upstream_variant,3_prime_UTR_variant,500B_downstream_variant,upstream_transcript_variant,non_coding_transcript_variant,downstream_transcript_variant
      Validated:
      by frequency,by alfa
      MAF:
      G=0./0 (ALFA)
      G=0.000004/1 (TOPMED)
      HGVS:
      4.

      rs1482340619 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        T>G [Show Flanks]
        Chromosome:
        14:23559106 (GRCh38)
        14:24028315 (GRCh37)
        Canonical SPDI:
        NC_000014.9:23559105:T:G
        Gene:
        AP1G2 (Varview), THTPA (Varview), AP1G2-AS1 (Varview)
        Functional Consequence:
        2KB_upstream_variant,3_prime_UTR_variant,500B_downstream_variant,upstream_transcript_variant,non_coding_transcript_variant,downstream_transcript_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        G=0./0 (ALFA)
        G=0.000004/1 (TOPMED)
        G=0.000007/1 (GnomAD)
        HGVS:
        5.

        rs1481307488 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          G>A [Show Flanks]
          Chromosome:
          14:23556806 (GRCh38)
          14:24026015 (GRCh37)
          Canonical SPDI:
          NC_000014.9:23556805:G:A
          Gene:
          THTPA (Varview), ZFHX2 (Varview)
          Functional Consequence:
          2KB_upstream_variant,missense_variant,coding_sequence_variant,intron_variant,upstream_transcript_variant
          Validated:
          by frequency
          MAF:
          A=0.000004/1 (GnomAD_exomes)
          HGVS:
          6.

          rs1479522052 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            C>G [Show Flanks]
            Chromosome:
            14:23558832 (GRCh38)
            14:24028041 (GRCh37)
            Canonical SPDI:
            NC_000014.9:23558831:C:G
            Gene:
            THTPA (Varview)
            Functional Consequence:
            coding_sequence_variant,non_coding_transcript_variant,missense_variant,3_prime_UTR_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            G=0./0 (ALFA)
            G=0.000004/1 (TOPMED)
            G=0.000012/3 (GnomAD_exomes)
            HGVS:
            7.

            rs1474782657 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              A>G [Show Flanks]
              Chromosome:
              14:23556940 (GRCh38)
              14:24026149 (GRCh37)
              Canonical SPDI:
              NC_000014.9:23556939:A:G
              Gene:
              THTPA (Varview), ZFHX2 (Varview)
              Functional Consequence:
              coding_sequence_variant,synonymous_variant,upstream_transcript_variant,intron_variant,2KB_upstream_variant
              Validated:
              by frequency
              MAF:
              G=0.000008/2 (GnomAD_exomes)
              HGVS:
              8.

              rs1472725405 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                T>A [Show Flanks]
                Chromosome:
                14:23556626 (GRCh38)
                14:24025835 (GRCh37)
                Canonical SPDI:
                NC_000014.9:23556625:T:A
                Gene:
                THTPA (Varview), ZFHX2 (Varview)
                Functional Consequence:
                5_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
                Validated:
                by frequency,by alfa
                MAF:
                A=0.0002/1 (ALFA)
                A=0.0002/1 (Estonian)
                HGVS:
                9.

                rs1472169311 [Homo sapiens]
                  Variant type:
                  DEL
                  Alleles:
                  G>- [Show Flanks]
                  Chromosome:
                  14:23558778 (GRCh38)
                  14:24027987 (GRCh37)
                  Canonical SPDI:
                  NC_000014.9:23558777:G:
                  Gene:
                  THTPA (Varview)
                  Functional Consequence:
                  frameshift_variant,non_coding_transcript_variant,coding_sequence_variant,3_prime_UTR_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  -=0./0 (ALFA)
                  -=0.000007/1 (GnomAD)
                  -=0.000008/2 (TOPMED)
                  HGVS:
                  10.

                  rs1471341807 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    C>T [Show Flanks]
                    Chromosome:
                    14:23558909 (GRCh38)
                    14:24028118 (GRCh37)
                    Canonical SPDI:
                    NC_000014.9:23558908:C:T
                    Gene:
                    THTPA (Varview)
                    Functional Consequence:
                    non_coding_transcript_variant,3_prime_UTR_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    T=0./0 (ALFA)
                    T=0.000004/1 (TOPMED)
                    T=0.000007/1 (GnomAD)
                    HGVS:
                    11.

                    rs1470836857 [Homo sapiens]
                      Variant type:
                      DELINS
                      Alleles:
                      ->A [Show Flanks]
                      Chromosome:
                      14:23556992 (GRCh38)
                      14:24026202 (GRCh37)
                      Canonical SPDI:
                      NC_000014.9:23556992:A:AA
                      Gene:
                      THTPA (Varview), ZFHX2 (Varview)
                      Functional Consequence:
                      coding_sequence_variant,stop_gained,upstream_transcript_variant,intron_variant,2KB_upstream_variant
                      Validated:
                      by frequency,by alfa
                      MAF:
                      AA=0./0 (ALFA)
                      A=0.000004/1 (GnomAD_exomes)
                      A=0.000004/1 (TOPMED)
                      HGVS:
                      13.

                      rs1469877649 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        C>T [Show Flanks]
                        Chromosome:
                        14:23556798 (GRCh38)
                        14:24026007 (GRCh37)
                        Canonical SPDI:
                        NC_000014.9:23556797:C:T
                        Gene:
                        THTPA (Varview), ZFHX2 (Varview)
                        Functional Consequence:
                        coding_sequence_variant,missense_variant,upstream_transcript_variant,intron_variant,2KB_upstream_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        T=0./0 (ALFA)
                        T=0.000008/2 (GnomAD_exomes)
                        T=0.000019/5 (TOPMED)
                        T=0.000029/4 (GnomAD)
                        HGVS:
                        14.

                        rs1469619809 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          G>C [Show Flanks]
                          Chromosome:
                          14:23556516 (GRCh38)
                          14:24025725 (GRCh37)
                          Canonical SPDI:
                          NC_000014.9:23556515:G:C
                          Gene:
                          THTPA (Varview), ZFHX2 (Varview)
                          Functional Consequence:
                          5_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          C=0./0 (ALFA)
                          C=0.000007/1 (GnomAD)
                          C=0.000023/6 (TOPMED)
                          HGVS:
                          15.

                          rs1469510295 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            C>G [Show Flanks]
                            Chromosome:
                            14:23559358 (GRCh38)
                            14:24028567 (GRCh37)
                            Canonical SPDI:
                            NC_000014.9:23559357:C:G
                            Gene:
                            AP1G2 (Varview), THTPA (Varview), AP1G2-AS1 (Varview)
                            Functional Consequence:
                            non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant,3_prime_UTR_variant
                            Validated:
                            by frequency,by alfa
                            MAF:
                            G=0./0 (ALFA)
                            G=0.000004/1 (TOPMED)
                            HGVS:
                            16.

                            rs1467156000 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              C>T [Show Flanks]
                              Chromosome:
                              14:23559079 (GRCh38)
                              14:24028288 (GRCh37)
                              Canonical SPDI:
                              NC_000014.9:23559078:C:T
                              Gene:
                              AP1G2 (Varview), THTPA (Varview)
                              Functional Consequence:
                              3_prime_UTR_variant,non_coding_transcript_variant,500B_downstream_variant,downstream_transcript_variant
                              Validated:
                              by frequency,by alfa,by cluster
                              MAF:
                              T=0./0 (ALFA)
                              T=0.000007/1 (GnomAD)
                              T=0.000011/3 (TOPMED)
                              HGVS:
                              18.
                              19.

                              rs1458872335 [Homo sapiens]
                                Variant type:
                                DEL
                                Alleles:
                                G>- [Show Flanks]
                                Chromosome:
                                14:23559343 (GRCh38)
                                14:24028552 (GRCh37)
                                Canonical SPDI:
                                NC_000014.9:23559342:G:
                                Gene:
                                AP1G2 (Varview), THTPA (Varview), AP1G2-AS1 (Varview)
                                Functional Consequence:
                                non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant,3_prime_UTR_variant
                                Validated:
                                by frequency,by alfa
                                MAF:
                                -=0./0 (ALFA)
                                -=0.000008/2 (TOPMED)
                                HGVS:

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