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Links from Nucleotide

Items: 1 to 20 of 225

1.
2.

rs1482624850 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    G>A [Show Flanks]
    Chromosome:
    X:48486141 (GRCh38)
    X:48344529 (GRCh37)
    Canonical SPDI:
    NC_000023.11:48486140:G:A
    Gene:
    FTSJ1 (Varview)
    Functional Consequence:
    genic_downstream_transcript_variant,non_coding_transcript_variant,3_prime_UTR_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    A=0.000162/3 (ALFA)
    A=0.00001/1 (GnomAD)
    A=0.000015/4 (TOPMED)
    HGVS:
    3.
    7.

    rs1461020769 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      A>G,T [Show Flanks]
      Chromosome:
      X:48476264 (GRCh38)
      X:48334652 (GRCh37)
      Canonical SPDI:
      NC_000023.11:48476263:A:G,NC_000023.11:48476263:A:T
      Gene:
      FTSJ1 (Varview), LOC124905185 (Varview)
      Functional Consequence:
      non_coding_transcript_variant,5_prime_UTR_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      T=0./0 (ALFA)
      T=0.000009/1 (GnomAD)
      HGVS:
      NC_000023.11:g.48476264A>G, NC_000023.11:g.48476264A>T, NC_000023.10:g.48334652A>G, NC_000023.10:g.48334652A>T, NG_008879.1:g.5104A>G, NG_008879.1:g.5104A>T, NM_012280.4:c.-220A>G, NM_012280.4:c.-220A>T, NM_012280.3:c.-220A>G, NM_012280.3:c.-220A>T, NM_012280.2:c.-220A>G, NM_012280.2:c.-220A>T, NM_177439.3:c.-326A>G, NM_177439.3:c.-326A>T, NM_177439.2:c.-326A>G, NM_177439.2:c.-326A>T, NM_177439.1:c.-326A>G, NM_177439.1:c.-326A>T, NM_001282157.1:c.-209A>G, NM_001282157.1:c.-209A>T, NW_004070880.2:g.715693A>G, NW_004070880.2:g.715693A>T, XR_949015.3:n.66A>G, XR_949015.3:n.66A>T, XR_949015.2:n.95A>G, XR_949015.2:n.95A>T, XR_949015.1:n.199A>G, XR_949015.1:n.199A>T, XR_949016.3:n.66A>G, XR_949016.3:n.66A>T, XR_949016.2:n.95A>G, XR_949016.2:n.95A>T, XR_949016.1:n.199A>G, XR_949016.1:n.199A>T, XM_005272595.3:c.-220A>G, XM_005272595.3:c.-220A>T, XM_005272595.2:c.-220A>G, XM_005272595.2:c.-220A>T, XM_005272595.1:c.-220A>G, XM_005272595.1:c.-220A>T, XM_024452359.2:c.-326A>G, XM_024452359.2:c.-326A>T, XM_024452359.1:c.-326A>G, XM_024452359.1:c.-326A>T, XR_007068186.1:n.66A>G, XR_007068186.1:n.66A>T, XM_047441943.1:c.-326A>G, XM_047441943.1:c.-326A>T, XM_047441945.1:c.-326A>G, XM_047441945.1:c.-326A>T, XR_007068226.1:n.80T>C, XR_007068226.1:n.80T>A, XM_047441942.1:c.-220A>G, XM_047441942.1:c.-220A>T, XM_047441944.1:c.-220A>G, XM_047441944.1:c.-220A>T
      10.

      rs1444044040 [Homo sapiens]
        Variant type:
        DELINS
        Alleles:
        G>- [Show Flanks]
        Chromosome:
        X:48485853 (GRCh38)
        X:48344241 (GRCh37)
        Canonical SPDI:
        NC_000023.11:48485852:GGG:GG
        Gene:
        FTSJ1 (Varview)
        Functional Consequence:
        non_coding_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        GG=0./0 (ALFA)
        -=0.000287/30 (GnomAD)
        -=0.000306/81 (TOPMED)
        HGVS:
        12.

        rs1432125513 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          C>T [Show Flanks]
          Chromosome:
          X:48476091 (GRCh38)
          X:48334479 (GRCh37)
          Canonical SPDI:
          NC_000023.11:48476090:C:T
          Gene:
          FTSJ1 (Varview), LOC124905185 (Varview)
          Functional Consequence:
          non_coding_transcript_variant,genic_upstream_transcript_variant,5_prime_UTR_variant,upstream_transcript_variant
          Validated:
          by frequency,by alfa
          MAF:
          T=0./0 (ALFA)
          T=0.000008/2 (TOPMED)
          HGVS:
          16.

          rs1422788704 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            G>C [Show Flanks]
            Chromosome:
            X:48486354 (GRCh38)
            X:48344742 (GRCh37)
            Canonical SPDI:
            NC_000023.11:48486353:G:C
            Gene:
            FTSJ1 (Varview)
            Functional Consequence:
            downstream_transcript_variant,non_coding_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            C=0./0 (ALFA)
            C=0.000004/1 (TOPMED)
            C=0.00001/1 (GnomAD)
            HGVS:
            17.

            rs1413962382 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>A,G,T [Show Flanks]
              Chromosome:
              X:48482761 (GRCh38)
              X:48341149 (GRCh37)
              Canonical SPDI:
              NC_000023.11:48482760:C:A,NC_000023.11:48482760:C:G,NC_000023.11:48482760:C:T
              Gene:
              FTSJ1 (Varview)
              Functional Consequence:
              synonymous_variant,coding_sequence_variant,non_coding_transcript_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              G=0./0 (ALFA)
              T=0.000058/6 (GnomAD)
              HGVS:
              NC_000023.11:g.48482761C>A, NC_000023.11:g.48482761C>G, NC_000023.11:g.48482761C>T, NC_000023.10:g.48341149C>A, NC_000023.10:g.48341149C>G, NC_000023.10:g.48341149C>T, NG_008879.1:g.11601C>A, NG_008879.1:g.11601C>G, NG_008879.1:g.11601C>T, NM_012280.4:c.924C>A, NM_012280.4:c.924C>G, NM_012280.4:c.924C>T, NM_012280.3:c.924C>A, NM_012280.3:c.924C>G, NM_012280.3:c.924C>T, NM_012280.2:c.924C>A, NM_012280.2:c.924C>G, NM_012280.2:c.924C>T, NM_177439.3:c.918C>A, NM_177439.3:c.918C>G, NM_177439.3:c.918C>T, NM_177439.2:c.918C>A, NM_177439.2:c.918C>G, NM_177439.2:c.918C>T, NM_177439.1:c.918C>A, NM_177439.1:c.918C>G, NM_177439.1:c.918C>T, NM_001282157.1:c.513C>A, NM_001282157.1:c.513C>G, NM_001282157.1:c.513C>T, NW_004070880.2:g.722190C>A, NW_004070880.2:g.722190C>G, NW_004070880.2:g.722190C>T, XR_949015.3:n.1209C>A, XR_949015.3:n.1209C>G, XR_949015.3:n.1209C>T, XR_949015.2:n.1238C>A, XR_949015.2:n.1238C>G, XR_949015.2:n.1238C>T, XR_949015.1:n.1342C>A, XR_949015.1:n.1342C>G, XR_949015.1:n.1342C>T, XR_949016.3:n.1209C>A, XR_949016.3:n.1209C>G, XR_949016.3:n.1209C>T, XR_949016.2:n.1238C>A, XR_949016.2:n.1238C>G, XR_949016.2:n.1238C>T, XR_949016.1:n.1342C>A, XR_949016.1:n.1342C>G, XR_949016.1:n.1342C>T, XM_005272595.3:c.918C>A, XM_005272595.3:c.918C>G, XM_005272595.3:c.918C>T, XM_005272595.2:c.918C>A, XM_005272595.2:c.918C>G, XM_005272595.2:c.918C>T, XM_005272595.1:c.918C>A, XM_005272595.1:c.918C>G, XM_005272595.1:c.918C>T, XM_024452359.2:c.924C>A, XM_024452359.2:c.924C>G, XM_024452359.2:c.924C>T, XM_024452359.1:c.924C>A, XM_024452359.1:c.924C>G, XM_024452359.1:c.924C>T, XR_007068186.1:n.1203C>A, XR_007068186.1:n.1203C>G, XR_007068186.1:n.1203C>T, NM_177434.1:c.918C>A, NM_177434.1:c.918C>G, NM_177434.1:c.918C>T, XM_047441943.1:c.924C>A, XM_047441943.1:c.924C>G, XM_047441943.1:c.924C>T, XM_047441945.1:c.918C>A, XM_047441945.1:c.918C>G, XM_047441945.1:c.918C>T, XM_047441942.1:c.924C>A, XM_047441942.1:c.924C>G, XM_047441942.1:c.924C>T, XM_047441944.1:c.918C>A, XM_047441944.1:c.918C>G, XM_047441944.1:c.918C>T

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