SNP Links for Nucleotide (Select 52627152) - SNP

Links from Nucleotide

Items: 1 to 20 of 522

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Select item 14909146171.

rs1490914617 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:55344169 (GRCh38)
11:55111645 (GRCh37)
Canonical SPDI:: NC_000011.10:55344168:G:A
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.55344169G>A, NC_000011.9:g.55111645G>A, NM_001005274.1:c.969G>A

Select item 14899345282.

rs1489934528 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:55343778 (GRCh38)
11:55111254 (GRCh37)
Canonical SPDI:: NC_000011.10:55343777:T:C
Gene:: OR4A16 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.55343778T>C, NC_000011.9:g.55111254T>C, NM_001005274.1:c.578T>C, NP_001005274.1:p.Ile193Thr

Select item 14828585083.

rs1482858508 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:55343795 (GRCh38)
11:55111271 (GRCh37)
Canonical SPDI:: NC_000011.10:55343794:G:A
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.55343795G>A, NC_000011.9:g.55111271G>A, NM_001005274.1:c.595G>A, NP_001005274.1:p.Ala199Thr

Select item 14791015074.

rs1479101507 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 11:55343728 (GRCh38)
11:55111204 (GRCh37)
Canonical SPDI:: NC_000011.10:55343727:C:A,NC_000011.10:55343727:C:G
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.55343728C>A, NC_000011.10:g.55343728C>G, NC_000011.9:g.55111204C>A, NC_000011.9:g.55111204C>G, NM_001005274.1:c.528C>A, NM_001005274.1:c.528C>G

Select item 14782654065.

rs1478265406 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:55343614 (GRCh38)
11:55111090 (GRCh37)
Canonical SPDI:: NC_000011.10:55343613:T:G
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.55343614T>G, NC_000011.9:g.55111090T>G, NM_001005274.1:c.414T>G

Select item 14780749956.

rs1478074995 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:55343967 (GRCh38)
11:55111443 (GRCh37)
Canonical SPDI:: NC_000011.10:55343966:A:G
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.55343967A>G, NC_000011.9:g.55111443A>G, NM_001005274.1:c.767A>G, NP_001005274.1:p.Tyr256Cys

Select item 14772849307.

rs1477284930 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 11:55344129 (GRCh38)
11:55111605 (GRCh37)
Canonical SPDI:: NC_000011.10:55344128:G:C,NC_000011.10:55344128:G:T
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000011.10:g.55344129G>C, NC_000011.10:g.55344129G>T, NC_000011.9:g.55111605G>C, NC_000011.9:g.55111605G>T, NM_001005274.1:c.929G>C, NM_001005274.1:c.929G>T, NP_001005274.1:p.Arg310Thr, NP_001005274.1:p.Arg310Ile

Select item 14679717698.

rs1467971769 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:55344084 (GRCh38)
11:55111560 (GRCh37)
Canonical SPDI:: NC_000011.10:55344083:C:T
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00069/2 (KOREAN)
HGVS:: NC_000011.10:g.55344084C>T, NC_000011.9:g.55111560C>T, NM_001005274.1:c.884C>T, NP_001005274.1:p.Ala295Val

Select item 14668240479.

rs1466824047 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:55343985 (GRCh38)
11:55111461 (GRCh37)
Canonical SPDI:: NC_000011.10:55343984:A:C
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.55343985A>C, NC_000011.9:g.55111461A>C, NM_001005274.1:c.785A>C, NP_001005274.1:p.Asn262Thr

Select item 146637097010.

rs1466370970 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:55343528 (GRCh38)
11:55111004 (GRCh37)
Canonical SPDI:: NC_000011.10:55343527:G:A,NC_000011.10:55343527:G:T
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.55343528G>A, NC_000011.10:g.55343528G>T, NC_000011.9:g.55111004G>A, NC_000011.9:g.55111004G>T, NM_001005274.1:c.328G>A, NM_001005274.1:c.328G>T, NP_001005274.1:p.Val110Ile, NP_001005274.1:p.Val110Phe

Select item 146071395911.

rs1460713959 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:55343909 (GRCh38)
11:55111385 (GRCh37)
Canonical SPDI:: NC_000011.10:55343908:A:C
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000011.10:g.55343909A>C, NC_000011.9:g.55111385A>C, NM_001005274.1:c.709A>C, NP_001005274.1:p.Thr237Pro

Select item 146031817812.

rs1460318178 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:55343833 (GRCh38)
11:55111309 (GRCh37)
Canonical SPDI:: NC_000011.10:55343832:T:G
Gene:: OR4A16 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.55343833T>G, NC_000011.9:g.55111309T>G, NM_001005274.1:c.633T>G, NP_001005274.1:p.Phe211Leu

Select item 145723555813.

rs1457235558 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:55343227 (GRCh38)
11:55110703 (GRCh37)
Canonical SPDI:: NC_000011.10:55343226:A:G
Gene:: OR4A16 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
HGVS:: NC_000011.10:g.55343227A>G, NC_000011.9:g.55110703A>G, NM_001005274.1:c.27A>G

Select item 145371411614.

rs1453714116 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:55343717 (GRCh38)
11:55111193 (GRCh37)
Canonical SPDI:: NC_000011.10:55343716:G:A,NC_000011.10:55343716:G:C
Gene:: OR4A16 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.55343717G>A, NC_000011.10:g.55343717G>C, NC_000011.9:g.55111193G>A, NC_000011.9:g.55111193G>C, NM_001005274.1:c.517G>A, NM_001005274.1:c.517G>C, NP_001005274.1:p.Asp173Asn, NP_001005274.1:p.Asp173His

Select item 145186223615.

rs1451862236 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:55343844 (GRCh38)
11:55111320 (GRCh37)
Canonical SPDI:: NC_000011.10:55343843:C:T
Gene:: OR4A16 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.55343844C>T, NC_000011.9:g.55111320C>T, NM_001005274.1:c.644C>T, NP_001005274.1:p.Ser215Phe

Select item 144627355016.

rs1446273550 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:55343202 (GRCh38)
11:55110678 (GRCh37)
Canonical SPDI:: NC_000011.10:55343201:T:C
Gene:: OR4A16 (Varview)
Functional Consequence:: initiator_codon_variant,missense_variant
HGVS:: NC_000011.10:g.55343202T>C, NC_000011.9:g.55110678T>C, NM_001005274.1:c.2T>C, NP_001005274.1:p.Met1Thr

Select item 144336336217.

rs1443363362 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:55343400 (GRCh38)
11:55110876 (GRCh37)
Canonical SPDI:: NC_000011.10:55343399:T:C
Gene:: OR4A16 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000011.10:g.55343400T>C, NC_000011.9:g.55110876T>C, NM_001005274.1:c.200T>C, NP_001005274.1:p.Met67Thr

Select item 144163017318.

rs1441630173 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:55343308 (GRCh38)
11:55110784 (GRCh37)
Canonical SPDI:: NC_000011.10:55343307:A:G
Gene:: OR4A16 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000011.10:g.55343308A>G, NC_000011.9:g.55110784A>G, NM_001005274.1:c.108A>G

Select item 144040870119.

rs1440408701 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATTT>- [Show Flanks]
Chromosome:: 11:55343275 (GRCh38)
11:55110751 (GRCh37)
Canonical SPDI:: NC_000011.10:55343272:TTATTT:TT
Gene:: OR4A16 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0.000071/1 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.55343275_55343278del, NC_000011.9:g.55110751_55110754del, NM_001005274.1:c.75_78del, NP_001005274.1:p.Phe26fs

Select item 143994343420.

rs1439943434 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:55343947 (GRCh38)
11:55111423 (GRCh37)
Canonical SPDI:: NC_000011.10:55343946:T:G
Gene:: OR4A16 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.55343947T>G, NC_000011.9:g.55111423T>G, NM_001005274.1:c.747T>G, NP_001005274.1:p.Phe249Leu

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