SNP Links for Nucleotide (Select 526253107) - SNP

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Links from Nucleotide

Items: 20

Select item 14463095401.

rs1446309540 has merged into rs879994430 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT,TTTTTT [Show Flanks]
Chromosome:: 1:146301276 (GRCh38)
1:145136475 (GRCh37)
Canonical SPDI:: NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000001.11:g.146301276_146301277del, NC_000001.11:g.146301277del, NC_000001.11:g.146301277dup, NC_000001.11:g.146301276_146301277dup, NC_000001.11:g.146301274_146301277dup, NW_003871055.3:g.3116689_3116690del, NW_003871055.3:g.3116690del, NW_003871055.3:g.3116690dup, NW_003871055.3:g.3116689_3116690dup, NW_003871055.3:g.3116687_3116690dup, NC_000001.10:g.145136478_145136479del, NC_000001.10:g.145136479del, NC_000001.10:g.145136479dup, NC_000001.10:g.145136478_145136479dup, NC_000001.10:g.145136476_145136479dup, NR_104005.1:n.3504_3505del, NR_104005.1:n.3505del, NR_104005.1:n.3505dup, NR_104005.1:n.3504_3505dup, NR_104005.1:n.3502_3505dup

Select item 12362753232.

rs1236275323 has merged into rs879994430 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT,TTTTTT [Show Flanks]
Chromosome:: 1:146301276 (GRCh38)
1:145136475 (GRCh37)
Canonical SPDI:: NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:146301259:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000001.11:g.146301276_146301277del, NC_000001.11:g.146301277del, NC_000001.11:g.146301277dup, NC_000001.11:g.146301276_146301277dup, NC_000001.11:g.146301274_146301277dup, NW_003871055.3:g.3116689_3116690del, NW_003871055.3:g.3116690del, NW_003871055.3:g.3116690dup, NW_003871055.3:g.3116689_3116690dup, NW_003871055.3:g.3116687_3116690dup, NC_000001.10:g.145136478_145136479del, NC_000001.10:g.145136479del, NC_000001.10:g.145136479dup, NC_000001.10:g.145136478_145136479dup, NC_000001.10:g.145136476_145136479dup, NR_104005.1:n.3504_3505del, NR_104005.1:n.3505del, NR_104005.1:n.3505dup, NR_104005.1:n.3504_3505dup, NR_104005.1:n.3502_3505dup

Select item 11841382953.

rs1184138295 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:146301152 (GRCh38)
1:145136587 (GRCh37)
Canonical SPDI:: NC_000001.11:146301151:C:G,NC_000001.11:146301151:C:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.00017/2 (ALFA)
G=0.00008/1 (TOMMO)
HGVS:: NC_000001.11:g.146301152C>G, NC_000001.11:g.146301152C>T, NW_003871055.3:g.3116565C>G, NW_003871055.3:g.3116565C>T, NC_000001.10:g.145136587G>C, NC_000001.10:g.145136587G>A, NR_104005.1:n.3380C>G, NR_104005.1:n.3380C>T

Select item 11812689844.

rs1181268984 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:146301281 (GRCh38)
1:145136455 (GRCh37)
Canonical SPDI:: NC_000001.11:146301280:G:A,NC_000001.11:146301280:G:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.02774/73 (KOREAN)
HGVS:: NC_000001.11:g.146301281G>A, NC_000001.11:g.146301281G>T, NW_003871055.3:g.3116694G>A, NW_003871055.3:g.3116694G>T, NC_000001.10:g.145136455C>T, NC_000001.10:g.145136455C>A, NR_104005.1:n.3509G>A, NR_104005.1:n.3509G>T

Select item 8689929295.

rs868992929 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:146300585 (GRCh38)
1:145137154 (GRCh37)
Canonical SPDI:: NC_000001.11:146300584:G:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.0002/1 (ALFA)
A=0.0046/1 (Qatari)
HGVS:: NC_000001.11:g.146300585G>T, NW_003871055.3:g.3115998G>T, NC_000001.10:g.145137154C>A, NR_104005.1:n.2813G>T

Select item 8689908036.

rs868990803 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:146301528 (GRCh38)
1:145136208 (GRCh37)
Canonical SPDI:: NC_000001.11:146301527:C:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.005/1 (Qatari)
HGVS:: NC_000001.11:g.146301528C>T, NW_003871055.3:g.3116941C>T, NC_000001.10:g.145136208G>A, NR_104005.1:n.3756C>T

Select item 8689789447.

rs868978944 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:146299597 (GRCh38)
1:145138143 (GRCh37)
Canonical SPDI:: NC_000001.11:146299596:C:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.014/3 (Qatari)
G=0.5/6 (SGDP_PRJ)
HGVS:: NC_000001.11:g.146299597C>T, NW_003871055.3:g.3115010C>T, NC_000001.10:g.145138143G>A, NR_104005.1:n.1825C>T

Select item 8689645778.

rs868964577 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:146300032 (GRCh38)
1:145137707 (GRCh37)
Canonical SPDI:: NC_000001.11:146300031:C:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.028/6 (Qatari)
G=0.5/10 (SGDP_PRJ)
HGVS:: NC_000001.11:g.146300032C>T, NW_003871055.3:g.3115445C>T, NC_000001.10:g.145137707G>A, NR_104005.1:n.2260C>T

Select item 8689587889.

rs868958788 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:146298746 (GRCh38)
1:145138994 (GRCh37)
Canonical SPDI:: NC_000001.11:146298745:G:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.009/2 (Qatari)
HGVS:: NC_000001.11:g.146298746G>T, NW_003871055.3:g.3114159G>T, NC_000001.10:g.145138994C>A, NR_104005.1:n.974G>T

Select item 86895620910.

rs868956209 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:146298805 (GRCh38)
1:145138935 (GRCh37)
Canonical SPDI:: NC_000001.11:146298804:A:C
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.005/1 (Qatari)
T=0.5/5 (SGDP_PRJ)
HGVS:: NC_000001.11:g.146298805A>C, NW_003871055.3:g.3114218A>C, NC_000001.10:g.145138935T>G, NR_104005.1:n.1033A>C

Select item 86894714711.

rs868947147 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 1:146298773 (GRCh38)
1:145138967 (GRCh37)
Canonical SPDI:: NC_000001.11:146298772:G:A,NC_000001.11:146298772:G:C,NC_000001.11:146298772:G:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0.00006/1 (TOMMO)
T=0.00926/2 (Qatari)
HGVS:: NC_000001.11:g.146298773G>A, NC_000001.11:g.146298773G>C, NC_000001.11:g.146298773G>T, NW_003871055.3:g.3114186G>A, NW_003871055.3:g.3114186G>C, NW_003871055.3:g.3114186G>T, NC_000001.10:g.145138967C>T, NC_000001.10:g.145138967C>G, NC_000001.10:g.145138967C>A, NR_104005.1:n.1001G>A, NR_104005.1:n.1001G>C, NR_104005.1:n.1001G>T

Select item 86893477112.

rs868934771 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:146301531 (GRCh38)
1:145136205 (GRCh37)
Canonical SPDI:: NC_000001.11:146301530:T:C,NC_000001.11:146301530:T:G
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00012/2 (TOMMO)
G=0.03704/8 (Qatari)
A=0.5/7 (SGDP_PRJ)
HGVS:: NC_000001.11:g.146301531T>C, NC_000001.11:g.146301531T>G, NW_003871055.3:g.3116944T>C, NW_003871055.3:g.3116944T>G, NC_000001.10:g.145136205A>G, NC_000001.10:g.145136205A>C, NR_104005.1:n.3759T>C, NR_104005.1:n.3759T>G

Select item 86893078413.

rs868930784 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:146297876 (GRCh38)
1:145139843 (GRCh37)
Canonical SPDI:: NC_000001.11:146297875:C:A,NC_000001.11:146297875:C:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.005/1 (Qatari)
HGVS:: NC_000001.11:g.146297876C>A, NC_000001.11:g.146297876C>T, NW_003871055.3:g.3113289C>A, NW_003871055.3:g.3113289C>T, NC_000001.10:g.145139843G>T, NC_000001.10:g.145139843G>A, NR_104005.1:n.104C>A, NR_104005.1:n.104C>T

Select item 86892535714.

rs868925357 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:146298247 (GRCh38)
1:145139492 (GRCh37)
Canonical SPDI:: NC_000001.11:146298246:C:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.005/1 (Qatari)
HGVS:: NC_000001.11:g.146298247C>T, NW_003871055.3:g.3113660C>T, NC_000001.10:g.145139492G>A, NR_104005.1:n.475C>T

Select item 86892281215.

rs868922812 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:146298604 (GRCh38)
1:145139135 (GRCh37)
Canonical SPDI:: NC_000001.11:146298603:G:A
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.014/3 (Qatari)
C=0.5/1 (SGDP_PRJ)
HGVS:: NC_000001.11:g.146298604G>A, NW_003871055.3:g.3114017G>A, NC_000001.10:g.145139135C>T, NR_104005.1:n.832G>A

Select item 86891476816.

rs868914768 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:146300548 (GRCh38)
1:145137191 (GRCh37)
Canonical SPDI:: NC_000001.11:146300547:A:G
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.005/2 (ALFA)
C=0.009/2 (Qatari)
T=0.5/6 (SGDP_PRJ)
HGVS:: NC_000001.11:g.146300548A>G, NW_003871055.3:g.3115961A>G, NC_000001.10:g.145137191T>C, NR_104005.1:n.2776A>G

Select item 86890859817.

rs868908598 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:146297849 (GRCh38)
1:145139870 (GRCh37)
Canonical SPDI:: NC_000001.11:146297848:T:C
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.009/2 (Qatari)
A=0.5/1 (SGDP_PRJ)
HGVS:: NC_000001.11:g.146297849T>C, NW_003871055.3:g.3113262T>C, NC_000001.10:g.145139870A>G, NR_104005.1:n.77T>C

Select item 79703041018.

rs797030410 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:146298366 (GRCh38)
1:145139373 (GRCh37)
Canonical SPDI:: NC_000001.11:146298365:A:G
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by cluster
HGVS:: NC_000001.11:g.146298366A>G, NW_003871055.3:g.3113779A>G, NC_000001.10:g.145139373T>C, NR_104005.1:n.594A>G

Select item 79702678319.

rs797026783 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:146299095 (GRCh38)
1:145138645 (GRCh37)
Canonical SPDI:: NC_000001.11:146299094:C:T
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.07002/313 (ALFA)
A=0.01223/205 (TOMMO)
A=0.0178/52 (KOREAN)
A=0.08667/52 (NorthernSweden)
G=0.5/18 (SGDP_PRJ)
HGVS:: NC_000001.11:g.146299095C>T, NW_003871055.3:g.3114508C>T, NC_000001.10:g.145138645G>A, NR_104005.1:n.1323C>T

Select item 79702647820.

rs797026478 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:146299012 (GRCh38)
1:145138728 (GRCh37)
Canonical SPDI:: NC_000001.11:146299011:T:G
Gene:: NUDT4P2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00022/1 (ALFA)
C=0.04052/679 (TOMMO)
C=0.08375/233 (KOREAN)
A=0.5/5 (SGDP_PRJ)
HGVS:: NC_000001.11:g.146299012T>G, NW_003871055.3:g.3114425T>G, NC_000001.10:g.145138728A>C, NR_104005.1:n.1240T>G

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SNP Links for Nucleotide (Select 526253107) (20)
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