Links from Nucleotide
Items: 1 to 20 of 369
1.
rs1491461792 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 1:6239256
(GRCh38)
1:6299316
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6239253:CACA:CA
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
CACA=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
2.
rs1490286343 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:6237137
(GRCh38)
1:6297197
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6237136:G:A
- Gene:
- ICMT (Varview), ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000011/3
(TOPMED)
- HGVS:
3.
rs1488205981 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:6239223
(GRCh38)
1:6299283
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6239222:A:G
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
4.
rs1484307123 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:6237298
(GRCh38)
1:6297358
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6237297:G:A
- Gene:
- ICMT (Varview), ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
5.
rs1483580528 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:6238239
(GRCh38)
1:6298299
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6238238:G:A
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
6.
rs1483208510 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 1:6239358
(GRCh38)
1:6299418
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6239357:C:G
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
G=0.000008/2
(TOPMED)
G=0.000156/1
(1000Genomes)
G=0.000177/3
(TOMMO)
G=0.000546/1
(Korea1K)
G=0.001027/3
(KOREAN)
- HGVS:
7.
rs1482929846 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 1:6236280
(GRCh38)
1:6296340
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6236279:T:C
- Gene:
- ICMT (Varview), ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0.000084/1
(
ALFA)
C=0.000007/1
(GnomAD)
- HGVS:
8.
rs1482800426 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:6239293
(GRCh38)
1:6299353
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6239292:A:G
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
9.
rs1482299043 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:6238646
(GRCh38)
1:6298706
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6238645:A:G
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
G=0.000014/2
(GnomAD)
- HGVS:
10.
rs1482209493 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:6238970
(GRCh38)
1:6299030
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6238969:A:G
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0./0
(GnomAD)
G=0.000004/1
(TOPMED)
G=0.001092/2
(Korea1K)
G=0.001369/4
(KOREAN)
G=0.00138/23
(TOMMO)
- HGVS:
11.
rs1481176418 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:6238439
(GRCh38)
1:6298499
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6238438:G:A
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000008/2
(TOPMED)
- HGVS:
12.
rs1480836765 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:6238430
(GRCh38)
1:6298490
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6238429:G:A
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
13.
rs1478717445 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- A>-
[Show Flanks]
- Chromosome:
- 1:6239372
(GRCh38)
1:6299432
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6239371:A:
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000008/2
(TOPMED)
- HGVS:
14.
rs1478344982 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:6236300
(GRCh38)
1:6296360
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6236299:A:G
- Gene:
- ICMT (Varview), ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
15.
rs1471804642 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:6236993
(GRCh38)
1:6297053
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6236992:G:A
- Gene:
- ICMT (Varview), ICMT-DT (Varview)
- Functional Consequence:
- upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000021/3
(GnomAD)
A=0.000045/12
(TOPMED)
- HGVS:
16.
rs1467223627 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:6237333
(GRCh38)
1:6297393
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6237332:A:G
- Gene:
- ICMT (Varview), ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
17.
rs1466528636 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 1:6238929
(GRCh38)
1:6298989
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6238928:C:T
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000007/1
(GnomAD)
- HGVS:
18.
rs1464871216 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 1:6239316
(GRCh38)
1:6299376
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6239315:C:T
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
19.
rs1463436414 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:6239205
(GRCh38)
1:6299265
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6239204:G:A
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
20.
rs1462107338 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 1:6238769
(GRCh38)
1:6298829
(GRCh37)
- Canonical SPDI:
- NC_000001.11:6238768:C:G
- Gene:
- ICMT-DT (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
G=0.000014/2
(GnomAD)
- HGVS: