Links from Nucleotide
Items: 1 to 20 of 12379
1.
rs1491455575 has merged into rs954501705 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTT>-,TT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 11:61312518
(GRCh38)
11:61079990
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:61312506:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00344/2
(NorthernSweden)
- HGVS:
NC_000011.10:g.61312518_61312526del, NC_000011.10:g.61312520_61312526del, NC_000011.10:g.61312522_61312526del, NC_000011.10:g.61312523_61312526del, NC_000011.10:g.61312524_61312526del, NC_000011.10:g.61312525_61312526del, NC_000011.10:g.61312526del, NC_000011.10:g.61312526dup, NC_000011.10:g.61312525_61312526dup, NC_000011.10:g.61312524_61312526dup, NC_000011.10:g.61312523_61312526dup, NC_000011.10:g.61312522_61312526dup, NC_000011.10:g.61312521_61312526dup, NC_000011.10:g.61312520_61312526dup, NC_000011.10:g.61312526_61312527insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000011.9:g.61079990_61079998del, NC_000011.9:g.61079992_61079998del, NC_000011.9:g.61079994_61079998del, NC_000011.9:g.61079995_61079998del, NC_000011.9:g.61079996_61079998del, NC_000011.9:g.61079997_61079998del, NC_000011.9:g.61079998del, NC_000011.9:g.61079998dup, NC_000011.9:g.61079997_61079998dup, NC_000011.9:g.61079996_61079998dup, NC_000011.9:g.61079995_61079998dup, NC_000011.9:g.61079994_61079998dup, NC_000011.9:g.61079993_61079998dup, NC_000011.9:g.61079992_61079998dup, NC_000011.9:g.61079998_61079999insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NG_032697.2:g.35082_35090del, NG_032697.2:g.35084_35090del, NG_032697.2:g.35086_35090del, NG_032697.2:g.35087_35090del, NG_032697.2:g.35088_35090del, NG_032697.2:g.35089_35090del, NG_032697.2:g.35090del, NG_032697.2:g.35090dup, NG_032697.2:g.35089_35090dup, NG_032697.2:g.35088_35090dup, NG_032697.2:g.35087_35090dup, NG_032697.2:g.35086_35090dup, NG_032697.2:g.35085_35090dup, NG_032697.2:g.35084_35090dup, NG_032697.2:g.35090_35091insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
2.
rs1491382738 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 11:61345655
(GRCh38)
11:61113128
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61345655:A:AA
- Gene:
- TKFC (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AA=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
A=0.000021/3
(GnomAD)
- HGVS:
3.
rs1491366432 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 11:61346348
(GRCh38)
11:61113820
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61346347:CA:
- Gene:
- TKFC (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,splice_acceptor_variant,intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.000004/1
(GnomAD_exomes)
-=0.000008/1
(ExAC)
- HGVS:
NC_000011.10:g.61346348_61346349del, NC_000011.9:g.61113820_61113821del, NG_032697.2:g.1248_1249del, XM_017017520.2:c.*24_*25del, XM_017017520.1:c.*24_*25del, NM_001351980.2:c.*24_*25del, NM_001351980.1:c.*24_*25del, NM_001351979.2:c.*24_*25del, NM_001351979.1:c.*24_*25del, XM_047426733.1:c.*24_*25del, XM_047426734.1:c.*24_*25del, XM_047426735.1:c.*24_*25del
4.
rs1491353295 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CT>-
[Show Flanks]
- Chromosome:
- 11:61344359
(GRCh38)
11:61111831
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61344358:CT:
- Gene:
- TKFC (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.0337/125
(TWINSUK)
-=0.0506/195
(ALSPAC)
- HGVS:
5.
rs1490998362 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 11:61318270
(GRCh38)
11:61085742
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61318269:G:A
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000014/2
(GnomAD)
- HGVS:
7.
rs1490942717 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 11:61320466
(GRCh38)
11:61087938
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61320465:G:C
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000011/3
(TOPMED)
C=0.000021/3
(GnomAD)
- HGVS:
8.
rs1490921749 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 11:61324479
(GRCh38)
11:61091951
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61324478:A:G
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000014/2
(GnomAD)
- HGVS:
9.
rs1490895201 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 11:61338731
(GRCh38)
11:61106203
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61338730:C:T
- Gene:
- TKFC (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS:
10.
rs1490862103 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 11:61323319
(GRCh38)
11:61090791
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61323318:T:C
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
11.
rs1490801417 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 11:61309812
(GRCh38)
11:61077284
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61309811:G:C
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- coding_sequence_variant,synonymous_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
12.
rs1490739422 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 11:61345775
(GRCh38)
11:61113247
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61345774:T:G
- Gene:
- TKFC (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency
- MAF:
G=0.000004/1
(GnomAD_exomes)
- HGVS:
13.
rs1490716619 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 11:61346637
(GRCh38)
11:61114109
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61346636:G:A
- Gene:
- TKFC (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
NC_000011.10:g.61346637G>A, NC_000011.9:g.61114109G>A, NG_032697.2:g.960C>T, NM_015533.4:c.*134G>A, NM_015533.3:c.*134G>A, XM_017017517.2:c.*134G>A, XM_017017517.1:c.*134G>A, NM_001351976.2:c.*134G>A, NM_001351976.1:c.*134G>A, XM_017017520.2:c.*313G>A, XM_017017520.1:c.*313G>A, NM_001351980.2:c.*313G>A, NM_001351980.1:c.*313G>A, NM_001351979.2:c.*313G>A, NM_001351979.1:c.*313G>A, XM_047426729.1:c.*134G>A, XM_047426733.1:c.*313G>A, XM_047426734.1:c.*313G>A, XM_047426730.1:c.*134G>A, XM_047426735.1:c.*313G>A
14.
rs1490472219 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->GG
[Show Flanks]
- Chromosome:
- 11:61316996
(GRCh38)
11:61084469
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61316996::GG
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0.00008/1
(
ALFA)
GG=0.0096/827
(GnomAD)
GG=0.01701/10
(NorthernSweden)
- HGVS:
15.
rs1490241458 has merged into rs58564398 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TATATATATATATATATATATATATATATATATATATATATATATA>-,TA,TATA,TATATA,TATATATA,TATATATATA,TATATATATATA,TATATATATATATA,TATATATATATATATA,TATATATATATATATATA,TATATATATATATATATATA,TATATATATATATATATATATA,TATATATATATATATATATATATA,TATATATATATATATATATATATATA,TATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
[Show Flanks]
- Chromosome:
- 11:61316954
(GRCh38)
11:61084426
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000011.10:61316946:ATATATATATATATATATATATATATATATATATATATATATATATATATATA:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000011.10:g.61316948TA[3], NC_000011.10:g.61316948TA[4], NC_000011.10:g.61316948TA[5], NC_000011.10:g.61316948TA[6], NC_000011.10:g.61316948TA[7], NC_000011.10:g.61316948TA[8], NC_000011.10:g.61316948TA[9], NC_000011.10:g.61316948TA[10], NC_000011.10:g.61316948TA[11], NC_000011.10:g.61316948TA[12], NC_000011.10:g.61316948TA[13], NC_000011.10:g.61316948TA[14], NC_000011.10:g.61316948TA[15], NC_000011.10:g.61316948TA[16], NC_000011.10:g.61316948TA[17], NC_000011.10:g.61316948TA[18], NC_000011.10:g.61316948TA[19], NC_000011.10:g.61316948TA[20], NC_000011.10:g.61316948TA[21], NC_000011.10:g.61316948TA[22], NC_000011.10:g.61316948TA[23], NC_000011.10:g.61316948TA[24], NC_000011.10:g.61316948TA[25], NC_000011.10:g.61316948TA[27], NC_000011.10:g.61316948TA[28], NC_000011.10:g.61316948TA[29], NC_000011.10:g.61316948TA[30], NC_000011.10:g.61316948TA[31], NC_000011.10:g.61316948TA[32], NC_000011.10:g.61316948TA[33], NC_000011.10:g.61316948TA[35], NC_000011.10:g.61316948TA[37], NC_000011.9:g.61084420TA[3], NC_000011.9:g.61084420TA[4], NC_000011.9:g.61084420TA[5], NC_000011.9:g.61084420TA[6], NC_000011.9:g.61084420TA[7], NC_000011.9:g.61084420TA[8], NC_000011.9:g.61084420TA[9], NC_000011.9:g.61084420TA[10], NC_000011.9:g.61084420TA[11], NC_000011.9:g.61084420TA[12], NC_000011.9:g.61084420TA[13], NC_000011.9:g.61084420TA[14], NC_000011.9:g.61084420TA[15], NC_000011.9:g.61084420TA[16], NC_000011.9:g.61084420TA[17], NC_000011.9:g.61084420TA[18], NC_000011.9:g.61084420TA[19], NC_000011.9:g.61084420TA[20], NC_000011.9:g.61084420TA[21], NC_000011.9:g.61084420TA[22], NC_000011.9:g.61084420TA[23], NC_000011.9:g.61084420TA[24], NC_000011.9:g.61084420TA[25], NC_000011.9:g.61084420TA[27], NC_000011.9:g.61084420TA[28], NC_000011.9:g.61084420TA[29], NC_000011.9:g.61084420TA[30], NC_000011.9:g.61084420TA[31], NC_000011.9:g.61084420TA[32], NC_000011.9:g.61084420TA[33], NC_000011.9:g.61084420TA[35], NC_000011.9:g.61084420TA[37], NG_032697.2:g.30599AT[3], NG_032697.2:g.30599AT[4], NG_032697.2:g.30599AT[5], NG_032697.2:g.30599AT[6], NG_032697.2:g.30599AT[7], NG_032697.2:g.30599AT[8], NG_032697.2:g.30599AT[9], NG_032697.2:g.30599AT[10], NG_032697.2:g.30599AT[11], NG_032697.2:g.30599AT[12], NG_032697.2:g.30599AT[13], NG_032697.2:g.30599AT[14], NG_032697.2:g.30599AT[15], NG_032697.2:g.30599AT[16], NG_032697.2:g.30599AT[17], NG_032697.2:g.30599AT[18], NG_032697.2:g.30599AT[19], NG_032697.2:g.30599AT[20], NG_032697.2:g.30599AT[21], NG_032697.2:g.30599AT[22], NG_032697.2:g.30599AT[23], NG_032697.2:g.30599AT[24], NG_032697.2:g.30599AT[25], NG_032697.2:g.30599AT[27], NG_032697.2:g.30599AT[28], NG_032697.2:g.30599AT[29], NG_032697.2:g.30599AT[30], NG_032697.2:g.30599AT[31], NG_032697.2:g.30599AT[32], NG_032697.2:g.30599AT[33], NG_032697.2:g.30599AT[35], NG_032697.2:g.30599AT[37]
16.
rs1490190949 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 11:61334432
(GRCh38)
11:61101904
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61334431:C:A
- Gene:
- DDB1 (Varview), TKFC (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,5_prime_UTR_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
A=0.000014/2
(GnomAD)
- HGVS:
17.
rs1490103529 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 11:61324891
(GRCh38)
11:61092363
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61324890:G:A
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000015/4
(TOPMED)
- HGVS:
18.
rs1489951994 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 11:61340643
(GRCh38)
11:61108115
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61340642:C:T
- Gene:
- TKFC (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.00004/0
(TOMMO)
T=0.00019/2
(GnomAD)
T=0.00069/2
(KOREAN)
- HGVS:
19.
rs1489876915 has merged into rs1387562315 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- T>-,TT,TTT
[Show Flanks]
- Chromosome:
- 11:61330670
(GRCh38)
11:61098142
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61330669:TTTTTTTTTTT:TTTTTTTTTT,NC_000011.10:61330669:TTTTTTTTTTT:TTTTTTTTTTTT,NC_000011.10:61330669:TTTTTTTTTTT:TTTTTTTTTTTTT
- Gene:
- DDB1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
-=0.00014/2
(TOMMO)
-=0.00874/56
(1000Genomes)
- HGVS:
20.
rs1489815427 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 11:61298255
(GRCh38)
11:61065727
(GRCh37)
- Canonical SPDI:
- NC_000011.10:61298254:T:C
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.000142/2
(
ALFA)
C=0.000007/1
(GnomAD)
C=0.000015/4
(TOPMED)
- HGVS: