SNP Links for Nucleotide (Select 391353402) - SNP

Links from Nucleotide

Items: 1 to 20 of 201

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Select item 14908852461.

rs1490885246 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:30810228 (GRCh38)
13:31384365 (GRCh37)
Canonical SPDI:: NC_000013.11:30810227:G:A
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
A=0.000177/3 (TOMMO)
HGVS:: NC_000013.11:g.30810228G>A, NC_000013.10:g.31384365G>A, NR_047012.1:n.489G>A

Select item 14900051572.

rs1490005157 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 13:30810374 (GRCh38)
13:31384511 (GRCh37)
Canonical SPDI:: NC_000013.11:30810373:GG:G
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000013.11:g.30810375del, NC_000013.10:g.31384512del, NR_047012.1:n.636del

Select item 14886304543.

rs1488630454 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 13:30803461 (GRCh38)
13:31377598 (GRCh37)
Canonical SPDI:: NC_000013.11:30803460:C:A
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000013.11:g.30803461C>A, NC_000013.10:g.31377598C>A, NR_047012.1:n.256C>A

Select item 14847810334.

rs1484781033 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 13:30803426 (GRCh38)
13:31377563 (GRCh37)
Canonical SPDI:: NC_000013.11:30803425:G:A,NC_000013.11:30803425:G:T
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.30803426G>A, NC_000013.11:g.30803426G>T, NC_000013.10:g.31377563G>A, NC_000013.10:g.31377563G>T, NR_047012.1:n.221G>A, NR_047012.1:n.221G>T

Select item 14814777825.

rs1481477782 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 13:30810560 (GRCh38)
13:31384697 (GRCh37)
Canonical SPDI:: NC_000013.11:30810559:G:
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.30810560del, NC_000013.10:g.31384697del, NR_047012.1:n.821del

Select item 14747826496.

rs1474782649 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:30810468 (GRCh38)
13:31384605 (GRCh37)
Canonical SPDI:: NC_000013.11:30810467:T:C
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.30810468T>C, NC_000013.10:g.31384605T>C, NR_047012.1:n.729T>C

Select item 14716127917.

rs1471612791 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:30803466 (GRCh38)
13:31377603 (GRCh37)
Canonical SPDI:: NC_000013.11:30803465:C:T
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0./0 (GnomAD)
HGVS:: NC_000013.11:g.30803466C>T, NC_000013.10:g.31377603C>T, NR_047012.1:n.261C>T

Select item 14706728268.

rs1470672826 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 13:30810261 (GRCh38)
13:31384398 (GRCh37)
Canonical SPDI:: NC_000013.11:30810260:A:C
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.30810261A>C, NC_000013.10:g.31384398A>C, NR_047012.1:n.522A>C

Select item 14704283189.

rs1470428318 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:30803443 (GRCh38)
13:31377580 (GRCh37)
Canonical SPDI:: NC_000013.11:30803442:T:C
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
HGVS:: NC_000013.11:g.30803443T>C, NC_000013.10:g.31377580T>C, NR_047012.1:n.238T>C

Select item 146607672910.

rs1466076729 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:30810355 (GRCh38)
13:31384492 (GRCh37)
Canonical SPDI:: NC_000013.11:30810354:G:A
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000013.11:g.30810355G>A, NC_000013.10:g.31384492G>A, NR_047012.1:n.616G>A

Select item 146483243711.

rs1464832437 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:30810534 (GRCh38)
13:31384671 (GRCh37)
Canonical SPDI:: NC_000013.11:30810533:C:T
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.30810534C>T, NC_000013.10:g.31384671C>T, NR_047012.1:n.795C>T

Select item 146301874812.

rs1463018748 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:30803207 (GRCh38)
13:31377344 (GRCh37)
Canonical SPDI:: NC_000013.11:30803206:G:T
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000013.11:g.30803207G>T, NC_000013.10:g.31377344G>T, NR_047012.1:n.2G>T

Select item 146149264413.

rs1461492644 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 13:30810493 (GRCh38)
13:31384630 (GRCh37)
Canonical SPDI:: NC_000013.11:30810492:G:C
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.30810493G>C, NC_000013.10:g.31384630G>C, NR_047012.1:n.754G>C

Select item 146123204514.

rs1461232045 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 13:30803321 (GRCh38)
13:31377458 (GRCh37)
Canonical SPDI:: NC_000013.11:30803320:C:A
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.30803321C>A, NC_000013.10:g.31377458C>A, NR_047012.1:n.116C>A

Select item 146075419915.

rs1460754199 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:30803238 (GRCh38)
13:31377375 (GRCh37)
Canonical SPDI:: NC_000013.11:30803237:G:A
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000013.11:g.30803238G>A, NC_000013.10:g.31377375G>A, NR_047012.1:n.33G>A

Select item 145944272216.

rs1459442722 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:30810150 (GRCh38)
13:31384287 (GRCh37)
Canonical SPDI:: NC_000013.11:30810149:A:G
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.30810150A>G, NC_000013.10:g.31384287A>G, NR_047012.1:n.411A>G

Select item 145473174217.

rs1454731742 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:30810522 (GRCh38)
13:31384659 (GRCh37)
Canonical SPDI:: NC_000013.11:30810521:C:T
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.30810522C>T, NC_000013.10:g.31384659C>T, NR_047012.1:n.783C>T

Select item 145208844518.

rs1452088445 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 13:30803513 (GRCh38)
13:31377650 (GRCh37)
Canonical SPDI:: NC_000013.11:30803512:C:G,NC_000013.11:30803512:C:T
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000013.11:g.30803513C>G, NC_000013.11:g.30803513C>T, NC_000013.10:g.31377650C>G, NC_000013.10:g.31377650C>T, NR_047012.1:n.308C>G, NR_047012.1:n.308C>T

Select item 145109746919.

rs1451097469 [Homo sapiens]

Variant type:: DELINS
Alleles:: CGGGCAGGAGCCTGGCTTGTTGGTGA>-,CGGGCAGGAGCCTGGCTTGTTGGTGACGGGCAGGAGCCTGGCTTGTTGGTGA [Show Flanks]
Chromosome:: 13:30810379 (GRCh38)
13:31384516 (GRCh37)
Canonical SPDI:: NC_000013.11:30810352:CGGGCAGGAGCCTGGCTTGTTGGTGACGGGCAGGAGCCTGGCTTGTTGGTGA:CGGGCAGGAGCCTGGCTTGTTGGTGA,NC_000013.11:30810352:CGGGCAGGAGCCTGGCTTGTTGGTGACGGGCAGGAGCCTGGCTTGTTGGTGA:CGGGCAGGAGCCTGGCTTGTTGGTGACGGGCAGGAGCCTGGCTTGTTGGTGACGGGCAGGAGCCTGGCTTGTTGGTGA
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CGGGCAGGAGCCTGGCTTGTTGGTGACGGGCAGGAGCCTGGCTTGTTGGTGA=0.00008/1 (ALFA)
-=0.00004/1 (TOMMO)
HGVS:: NC_000013.11:g.30810353CGGGCAGGAGCCTGGCTTGTTGGTGA[1], NC_000013.11:g.30810353CGGGCAGGAGCCTGGCTTGTTGGTGA[3], NC_000013.10:g.31384490CGGGCAGGAGCCTGGCTTGTTGGTGA[1], NC_000013.10:g.31384490CGGGCAGGAGCCTGGCTTGTTGGTGA[3], NR_047012.1:n.614CGGGCAGGAGCCTGGCTTGTTGGTGA[1], NR_047012.1:n.614CGGGCAGGAGCCTGGCTTGTTGGTGA[3]

Select item 144602633920.

rs1446026339 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 13:30810382 (GRCh38)
13:31384519 (GRCh37)
Canonical SPDI:: NC_000013.11:30810381:G:A,NC_000013.11:30810381:G:T
Gene:: LINC00398 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.30810382G>A, NC_000013.11:g.30810382G>T, NC_000013.10:g.31384519G>A, NC_000013.10:g.31384519G>T, NR_047012.1:n.643G>A, NR_047012.1:n.643G>T

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Links from Nucleotide

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