SNP Links for Nucleotide (Select 389616142) - SNP

Links from Nucleotide

Items: 1 to 20 of 108

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Select item 14855065871.

rs1485506587 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:78037216 (GRCh38)
13:78611351 (GRCh37)
Canonical SPDI:: NC_000013.11:78037215:A:G
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.78037216A>G, NC_000013.10:g.78611351A>G, NR_047028.1:n.456A>G

Select item 14794661242.

rs1479466124 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 13:78012921 (GRCh38)
13:78587056 (GRCh37)
Canonical SPDI:: NC_000013.11:78012920:CA:
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.78012921_78012922del, NC_000013.10:g.78587056_78587057del, NR_047028.1:n.39_40del

Select item 14683902253.

rs1468390225 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:78029945 (GRCh38)
13:78604080 (GRCh37)
Canonical SPDI:: NC_000013.11:78029944:C:T
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.78029945C>T, NC_000013.10:g.78604080C>T, NR_047028.1:n.178C>T

Select item 14681180464.

rs1468118046 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 13:78031978 (GRCh38)
13:78606114 (GRCh37)
Canonical SPDI:: NC_000013.11:78031978:A:AA
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.78031979dup, NC_000013.10:g.78606114dup, NR_047028.1:n.430dup

Select item 14677560915.

rs1467756091 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 13:78031873 (GRCh38)
13:78606008 (GRCh37)
Canonical SPDI:: NC_000013.11:78031872:T:A,NC_000013.11:78031872:T:C
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000342/1 (KOREAN)
A=0.00463/1 (Vietnamese)
HGVS:: NC_000013.11:g.78031873T>A, NC_000013.11:g.78031873T>C, NC_000013.10:g.78606008T>A, NC_000013.10:g.78606008T>C, NR_047028.1:n.324T>A, NR_047028.1:n.324T>C

Select item 14592298646.

rs1459229864 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:78030049 (GRCh38)
13:78604184 (GRCh37)
Canonical SPDI:: NC_000013.11:78030048:A:G
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.78030049A>G, NC_000013.10:g.78604184A>G, NR_047028.1:n.282A>G

Select item 14513922027.

rs1451392202 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:78053501 (GRCh38)
13:78627636 (GRCh37)
Canonical SPDI:: NC_000013.11:78053500:A:G
Gene:: LINC00446 (Varview), OBI1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.78053501A>G, NC_000013.10:g.78627636A>G, NR_047028.1:n.514A>G

Select item 14430057128.

rs1443005712 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:78031923 (GRCh38)
13:78606058 (GRCh37)
Canonical SPDI:: NC_000013.11:78031922:A:G
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000013.11:g.78031923A>G, NC_000013.10:g.78606058A>G, NR_047028.1:n.374A>G

Select item 14402946449.

rs1440294644 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 13:78030029 (GRCh38)
13:78604164 (GRCh37)
Canonical SPDI:: NC_000013.11:78030028:T:G
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.78030029T>G, NC_000013.10:g.78604164T>G, NR_047028.1:n.262T>G

Select item 144020084110.

rs1440200841 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:78037202 (GRCh38)
13:78611337 (GRCh37)
Canonical SPDI:: NC_000013.11:78037201:C:T
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.78037202C>T, NC_000013.10:g.78611337C>T, NR_047028.1:n.442C>T

Select item 143825824311.

rs1438258243 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 13:78053563 (GRCh38)
13:78627699 (GRCh37)
Canonical SPDI:: NC_000013.11:78053563:AAAA:AAAAA
Gene:: LINC00446 (Varview), OBI1-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAA=0.000071/1 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000013.11:g.78053567dup, NC_000013.10:g.78627702dup, NR_047028.1:n.580dup

Select item 142859651112.

rs1428596511 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:78012935 (GRCh38)
13:78587070 (GRCh37)
Canonical SPDI:: NC_000013.11:78012934:G:A
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000447/2 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000446/2 (Estonian)
HGVS:: NC_000013.11:g.78012935G>A, NC_000013.10:g.78587070G>A, NR_047028.1:n.53G>A

Select item 141812957213.

rs1418129572 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:78013752 (GRCh38)
13:78587887 (GRCh37)
Canonical SPDI:: NC_000013.11:78013751:A:G
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000013.11:g.78013752A>G, NC_000013.10:g.78587887A>G, NR_047028.1:n.143A>G

Select item 141529151114.

rs1415291511 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:78012923 (GRCh38)
13:78587058 (GRCh37)
Canonical SPDI:: NC_000013.11:78012922:T:C
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
C=0.000546/1 (Korea1K)
C=0.000684/2 (KOREAN)
HGVS:: NC_000013.11:g.78012923T>C, NC_000013.10:g.78587058T>C, NR_047028.1:n.41T>C

Select item 141080306815.

rs1410803068 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:78030069 (GRCh38)
13:78604204 (GRCh37)
Canonical SPDI:: NC_000013.11:78030068:C:T
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000013.11:g.78030069C>T, NC_000013.10:g.78604204C>T, NR_047028.1:n.302C>T

Select item 140885404716.

rs1408854047 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:78053556 (GRCh38)
13:78627691 (GRCh37)
Canonical SPDI:: NC_000013.11:78053555:T:C
Gene:: LINC00446 (Varview), OBI1-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
HGVS:: NC_000013.11:g.78053556T>C, NC_000013.10:g.78627691T>C, NR_047028.1:n.569T>C

Select item 140219243517.

rs1402192435 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 13:78012932 (GRCh38)
13:78587067 (GRCh37)
Canonical SPDI:: NC_000013.11:78012931:C:G,NC_000013.11:78012931:C:T
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.78012932C>G, NC_000013.11:g.78012932C>T, NC_000013.10:g.78587067C>G, NC_000013.10:g.78587067C>T, NR_047028.1:n.50C>G, NR_047028.1:n.50C>T

Select item 140189823218.

rs1401898232 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:78031865 (GRCh38)
13:78606000 (GRCh37)
Canonical SPDI:: NC_000013.11:78031864:A:G
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000023/6 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000013.11:g.78031865A>G, NC_000013.10:g.78606000A>G, NR_047028.1:n.316A>G

Select item 139586090419.

rs1395860904 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 13:78013687 (GRCh38)
13:78587822 (GRCh37)
Canonical SPDI:: NC_000013.11:78013686:C:A
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.78013687C>A, NC_000013.10:g.78587822C>A, NR_047028.1:n.78C>A

Select item 138762212120.

rs1387622121 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:78013679 (GRCh38)
13:78587814 (GRCh37)
Canonical SPDI:: NC_000013.11:78013678:A:G
Gene:: LINC00446 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000013.11:g.78013679A>G, NC_000013.10:g.78587814A>G, NR_047028.1:n.70A>G

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