SNP Links for Nucleotide (Select 383872583) - SNP

Links from Nucleotide

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Select item 14875523761.

rs1487552376 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTCATATT>- [Show Flanks]
Chromosome:: 10:43647923 (GRCh38)
10:44143371 (GRCh37)
Canonical SPDI:: NC_000010.11:43647919:ATTGTCATATT:ATT
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATT=0./0 (ALFA)
-=0.000053/14 (TOPMED)
-=0.000057/8 (GnomAD)
HGVS:: NC_000010.11:g.43647923_43647930del, NC_000010.10:g.44143371_44143378del, NR_047558.1:n.809_816del

Select item 14868652322.

rs1486865232 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:43646169 (GRCh38)
10:44141617 (GRCh37)
Canonical SPDI:: NC_000010.11:43646168:T:C
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000010.11:g.43646169T>C, NC_000010.10:g.44141617T>C, NM_001005368.3:c.-36A>G, NM_001005368.2:c.-36A>G, NM_001005368.1:c.-36A>G, NM_006973.3:c.-36A>G, NM_006973.2:c.-36A>G, NM_001324165.2:c.-130A>G, NM_001324165.1:c.-130A>G, NM_001324168.2:c.-115A>G, NM_001324168.1:c.-115A>G, NM_001324164.2:c.-130A>G, NM_001324164.1:c.-130A>G, NM_001324166.2:c.-119A>G, NM_001324166.1:c.-119A>G, NM_001324167.2:c.-115A>G, NM_001324167.1:c.-115A>G, NR_047558.1:n.228T>C

Select item 14822887243.

rs1482288724 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:43647205 (GRCh38)
10:44142653 (GRCh37)
Canonical SPDI:: NC_000010.11:43647204:T:C
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.43647205T>C, NC_000010.10:g.44142653T>C, NR_047558.1:n.450T>C

Select item 14775786674.

rs1477578667 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:43647714 (GRCh38)
10:44143162 (GRCh37)
Canonical SPDI:: NC_000010.11:43647713:G:A
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
HGVS:: NC_000010.11:g.43647714G>A, NC_000010.10:g.44143162G>A, NR_047558.1:n.600G>A

Select item 14734956685.

rs1473495668 [Homo sapiens]

Variant type:: DELINS
Alleles:: TAG>- [Show Flanks]
Chromosome:: 10:43647827 (GRCh38)
10:44143275 (GRCh37)
Canonical SPDI:: NC_000010.11:43647824:AGTAG:AG
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AG=0./0 (ALFA)
-=0.000036/5 (GnomAD)
-=0.000053/14 (TOPMED)
HGVS:: NC_000010.11:g.43647827_43647829del, NC_000010.10:g.44143275_44143277del, NR_047558.1:n.713_715del

Select item 14696136306.

rs1469613630 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:43647988 (GRCh38)
10:44143436 (GRCh37)
Canonical SPDI:: NC_000010.11:43647987:C:T
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.43647988C>T, NC_000010.10:g.44143436C>T, NR_047558.1:n.874C>T

Select item 14692979657.

rs1469297965 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 10:43646018 (GRCh38)
10:44141466 (GRCh37)
Canonical SPDI:: NC_000010.11:43646017:A:C
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,non_coding_transcript_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.43646018A>C, NC_000010.10:g.44141466A>C, NM_001324165.2:c.22T>G, NM_001324165.1:c.22T>G, NM_001324164.2:c.22T>G, NM_001324164.1:c.22T>G, NR_047558.1:n.77A>C, NP_001311094.1:p.Ser8Ala, NP_001311093.1:p.Ser8Ala

Select item 14682774848.

rs1468277484 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 10:43646109 (GRCh38)
10:44141557 (GRCh37)
Canonical SPDI:: NC_000010.11:43646108:G:T
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,5_prime_UTR_variant,missense_variant,intron_variant
Validated:: by frequency
MAF:: T=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000010.11:g.43646109G>T, NC_000010.10:g.44141557G>T, NM_001005368.3:c.25C>A, NM_001005368.2:c.25C>A, NM_001005368.1:c.25C>A, NM_006973.3:c.25C>A, NM_006973.2:c.25C>A, NM_001324165.2:c.-70C>A, NM_001324165.1:c.-70C>A, NM_001324168.2:c.-55C>A, NM_001324168.1:c.-55C>A, NM_001324164.2:c.-70C>A, NM_001324164.1:c.-70C>A, NM_001324166.2:c.-59C>A, NM_001324166.1:c.-59C>A, NM_001324167.2:c.-55C>A, NM_001324167.1:c.-55C>A, NR_047558.1:n.168G>T, NP_001005368.1:p.Leu9Met, NP_008904.1:p.Leu9Met

Select item 14656974899.

rs1465697489 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 10:43648018 (GRCh38)
10:44143466 (GRCh37)
Canonical SPDI:: NC_000010.11:43648017:T:G
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.43648018T>G, NC_000010.10:g.44143466T>G, NR_047558.1:n.904T>G

Select item 145269252110.

rs1452692521 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 10:43647724 (GRCh38)
10:44143172 (GRCh37)
Canonical SPDI:: NC_000010.11:43647723:G:T
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.00004/1 (TOMMO)
T=0.00137/4 (KOREAN)
T=0.00328/6 (Korea1K)
HGVS:: NC_000010.11:g.43647724G>T, NC_000010.10:g.44143172G>T, NR_047558.1:n.610G>T

Select item 145035627511.

rs1450356275 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:43646093 (GRCh38)
10:44141541 (GRCh37)
Canonical SPDI:: NC_000010.11:43646092:C:T
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,missense_variant,non_coding_transcript_variant,coding_sequence_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.43646093C>T, NC_000010.10:g.44141541C>T, NM_001005368.3:c.41G>A, NM_001005368.2:c.41G>A, NM_001005368.1:c.41G>A, NM_006973.3:c.41G>A, NM_006973.2:c.41G>A, NM_001324165.2:c.-54G>A, NM_001324165.1:c.-54G>A, NM_001324168.2:c.-39G>A, NM_001324168.1:c.-39G>A, NM_001324164.2:c.-54G>A, NM_001324164.1:c.-54G>A, NM_001324166.2:c.-43G>A, NM_001324166.1:c.-43G>A, NM_001324167.2:c.-39G>A, NM_001324167.1:c.-39G>A, NR_047558.1:n.152C>T, NP_001005368.1:p.Gly14Glu, NP_008904.1:p.Gly14Glu

Select item 144963652212.

rs1449636522 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:43647644 (GRCh38)
10:44143092 (GRCh37)
Canonical SPDI:: NC_000010.11:43647643:G:A
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.43647644G>A, NC_000010.10:g.44143092G>A, NR_047558.1:n.530G>A

Select item 144887013013.

rs1448870130 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:43647804 (GRCh38)
10:44143252 (GRCh37)
Canonical SPDI:: NC_000010.11:43647803:G:A
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.43647804G>A, NC_000010.10:g.44143252G>A, NR_047558.1:n.690G>A

Select item 144102277214.

rs1441022772 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 10:43646023 (GRCh38)
10:44141471 (GRCh37)
Canonical SPDI:: NC_000010.11:43646022:C:A,NC_000010.11:43646022:C:T
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,missense_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.43646023C>A, NC_000010.11:g.43646023C>T, NC_000010.10:g.44141471C>A, NC_000010.10:g.44141471C>T, NM_001324165.2:c.17G>T, NM_001324165.2:c.17G>A, NM_001324165.1:c.17G>T, NM_001324165.1:c.17G>A, NM_001324164.2:c.17G>T, NM_001324164.2:c.17G>A, NM_001324164.1:c.17G>T, NM_001324164.1:c.17G>A, NR_047558.1:n.82C>A, NR_047558.1:n.82C>T, NP_001311094.1:p.Arg6Ile, NP_001311094.1:p.Arg6Lys, NP_001311093.1:p.Arg6Ile, NP_001311093.1:p.Arg6Lys

Select item 144025505015.

rs1440255050 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 10:43646157 (GRCh38)
10:44141605 (GRCh37)
Canonical SPDI:: NC_000010.11:43646156:G:C
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,5_prime_UTR_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.43646157G>C, NC_000010.10:g.44141605G>C, NM_001005368.3:c.-24C>G, NM_001005368.2:c.-24C>G, NM_001005368.1:c.-24C>G, NM_006973.3:c.-24C>G, NM_006973.2:c.-24C>G, NM_001324165.2:c.-118C>G, NM_001324165.1:c.-118C>G, NM_001324168.2:c.-103C>G, NM_001324168.1:c.-103C>G, NM_001324164.2:c.-118C>G, NM_001324164.1:c.-118C>G, NM_001324166.2:c.-107C>G, NM_001324166.1:c.-107C>G, NM_001324167.2:c.-103C>G, NM_001324167.1:c.-103C>G, NR_047558.1:n.216G>C

Select item 143829938116.

rs1438299381 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 10:43648008 (GRCh38)
10:44143457 (GRCh37)
Canonical SPDI:: NC_000010.11:43648008:TTTT:TTTTT
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: TTTTT=0./0 (ALFA)
HGVS:: NC_000010.11:g.43648012dup, NC_000010.10:g.44143460dup, NR_047558.1:n.898dup

Select item 143772047617.

rs1437720476 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:43647745 (GRCh38)
10:44143193 (GRCh37)
Canonical SPDI:: NC_000010.11:43647744:C:T
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.43647745C>T, NC_000010.10:g.44143193C>T, NR_047558.1:n.631C>T

Select item 143685829318.

rs1436858293 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:43645992 (GRCh38)
10:44141440 (GRCh37)
Canonical SPDI:: NC_000010.11:43645991:G:A
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000142/2 (ALFA)
A=0.000026/7 (TOPMED)
A=0.00005/7 (GnomAD)
HGVS:: NC_000010.11:g.43645992G>A, NC_000010.10:g.44141440G>A, NM_001324165.2:c.48C>T, NM_001324165.1:c.48C>T, NM_001324164.2:c.48C>T, NM_001324164.1:c.48C>T, NR_047558.1:n.51G>A

Select item 143452073319.

rs1434520733 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:43647773 (GRCh38)
10:44143221 (GRCh37)
Canonical SPDI:: NC_000010.11:43647772:T:C
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000224/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000010.11:g.43647773T>C, NC_000010.10:g.44143221T>C, NR_047558.1:n.659T>C

Select item 143337987420.

rs1433379874 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 10:43647871 (GRCh38)
10:44143319 (GRCh37)
Canonical SPDI:: NC_000010.11:43647870:G:A,NC_000010.11:43647870:G:C
Gene:: ZNF32 (Varview), ZNF32-AS3 (Varview), ZNF32-AS2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000010.11:g.43647871G>A, NC_000010.11:g.43647871G>C, NC_000010.10:g.44143319G>A, NC_000010.10:g.44143319G>C, NR_047558.1:n.757G>A, NR_047558.1:n.757G>C

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