SNP Links for Nucleotide (Select 38016905) - SNP

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Links from Nucleotide

Items: 1 to 20 of 455

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Select item 14909991471.

rs1490999147 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 8:11365756 (GRCh38)
8:11223265 (GRCh37)
Canonical SPDI:: NC_000008.11:11365755:C:G
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000008.11:g.11365756C>G, NC_000008.10:g.11223265C>G, NW_018654717.1:g.1981095G>C, NM_152566.2:c.*360C>G, NM_152566.1:c.*360C>G, NR_001578.1:n.1151C>G

Select item 14904850862.

rs1490485086 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 8:11368348 (GRCh38)
8:11225857 (GRCh37)
Canonical SPDI:: NC_000008.11:11368347:C:G
Gene:: FAM167A-AS1 (Varview), TDH (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000008.11:g.11368348C>G, NC_000008.10:g.11225857C>G, NW_018654717.1:g.1978503G>C, NM_152566.2:c.*462C>G, NR_001578.1:n.1253C>G

Select item 14874467043.

rs1487446704 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:11358168 (GRCh38)
8:11215677 (GRCh37)
Canonical SPDI:: NC_000008.11:11358167:A:G
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.11358168A>G, NC_000008.10:g.11215677A>G, NW_018654717.1:g.1988683T>C, NM_152566.2:c.205A>G, NM_152566.1:c.205A>G, NR_001578.1:n.303A>G

Select item 14868433204.

rs1486843320 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:11368281 (GRCh38)
8:11225790 (GRCh37)
Canonical SPDI:: NC_000008.11:11368280:T:C
Gene:: FAM167A-AS1 (Varview), TDH (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000008.11:g.11368281T>C, NC_000008.10:g.11225790T>C, NW_018654717.1:g.1978570A>G, NM_152566.2:c.*395T>C, NR_001578.1:n.1186T>C

Select item 14861952125.

rs1486195212 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 8:11365653 (GRCh38)
8:11223162 (GRCh37)
Canonical SPDI:: NC_000008.11:11365652:T:A
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.11365653T>A, NC_000008.10:g.11223162T>A, NW_018654717.1:g.1981198A>T, NM_152566.2:c.*257T>A, NM_152566.1:c.*257T>A, NR_001578.1:n.1048T>A

Select item 14838643586.

rs1483864358 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 8:11361759 (GRCh38)
8:11219268 (GRCh37)
Canonical SPDI:: NC_000008.11:11361758:C:G,NC_000008.11:11361758:C:T
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00003/8 (TOPMED)
T=0.000036/5 (GnomAD)
G=0.001667/1 (NorthernSweden)
HGVS:: NC_000008.11:g.11361759C>G, NC_000008.11:g.11361759C>T, NC_000008.10:g.11219268C>G, NC_000008.10:g.11219268C>T, NW_018654717.1:g.1985092G>C, NW_018654717.1:g.1985092G>A, NM_152566.2:c.561C>G, NM_152566.2:c.561C>T, NM_152566.1:c.411C>G, NM_152566.1:c.411C>T, NR_001578.1:n.659C>G, NR_001578.1:n.659C>T

Select item 14833993937.

rs1483399393 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 8:11361717 (GRCh38)
8:11219226 (GRCh37)
Canonical SPDI:: NC_000008.11:11361716:C:G,NC_000008.11:11361716:C:T
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (GnomAD)
HGVS:: NC_000008.11:g.11361717C>G, NC_000008.11:g.11361717C>T, NC_000008.10:g.11219226C>G, NC_000008.10:g.11219226C>T, NW_018654717.1:g.1985134G>C, NW_018654717.1:g.1985134G>A, NM_152566.2:c.519C>G, NM_152566.2:c.519C>T, NM_152566.1:c.369C>G, NM_152566.1:c.369C>T, NR_001578.1:n.617C>G, NR_001578.1:n.617C>T

Select item 14814399758.

rs1481439975 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 8:11365630 (GRCh38)
8:11223140 (GRCh37)
Canonical SPDI:: NC_000008.11:11365630:GGGGG:GGGGGG
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGGGG=0.000285/4 (ALFA)
G=0.000378/53 (GnomAD)
G=0.00045/119 (TOPMED)
HGVS:: NC_000008.11:g.11365635dup, NC_000008.10:g.11223144dup, NW_018654717.1:g.1981220dup, NM_152566.2:c.*239dup, NM_152566.1:c.*239dup, NR_001578.1:n.1030dup

Select item 14801093579.

rs1480109357 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:11364803 (GRCh38)
8:11222312 (GRCh37)
Canonical SPDI:: NC_000008.11:11364802:A:C
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000008.11:g.11364803A>C, NC_000008.10:g.11222312A>C, NW_018654717.1:g.1982048T>G, NM_152566.2:c.693A>C, NM_152566.1:c.543A>C, NR_001578.1:n.791A>C

Select item 147702080510.

rs1477020805 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 8:11361458 (GRCh38)
8:11218967 (GRCh37)
Canonical SPDI:: NC_000008.11:11361457:G:C
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000045/12 (TOPMED)
C=0.000814/14 (TOMMO)
C=0.003072/9 (KOREAN)
HGVS:: NC_000008.11:g.11361458G>C, NC_000008.10:g.11218967G>C, NW_018654717.1:g.1985393C>G, NM_152566.2:c.359G>C, NR_001578.1:n.457G>C

Select item 147651686211.

rs1476516862 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 8:11339663 (GRCh38)
8:11197172 (GRCh37)
Canonical SPDI:: NC_000008.11:11339662:G:A,NC_000008.11:11339662:G:T
Gene:: MTMR9 (Varview), TDH (Varview)
Functional Consequence:: 500B_downstream_variant,non_coding_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00003/8 (TOPMED)
T=0.000035/1 (TOMMO)
A=0.000036/5 (GnomAD)
HGVS:: NC_000008.11:g.11339663G>A, NC_000008.11:g.11339663G>T, NC_000008.10:g.11197172G>A, NC_000008.10:g.11197172G>T, NW_018654717.1:g.2007182C>T, NW_018654717.1:g.2007182C>A, NM_152566.2:c.-72G>A, NM_152566.2:c.-72G>T, NR_001578.1:n.27G>A, NR_001578.1:n.27G>T

Select item 147584331412.

rs1475843314 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 8:11339654 (GRCh38)
8:11197163 (GRCh37)
Canonical SPDI:: NC_000008.11:11339653:C:G,NC_000008.11:11339653:C:T
Gene:: MTMR9 (Varview), TDH (Varview)
Functional Consequence:: 500B_downstream_variant,non_coding_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000008.11:g.11339654C>G, NC_000008.11:g.11339654C>T, NC_000008.10:g.11197163C>G, NC_000008.10:g.11197163C>T, NW_018654717.1:g.2007191G>C, NW_018654717.1:g.2007191G>A, NM_152566.2:c.-81C>G, NM_152566.2:c.-81C>T, NR_001578.1:n.18C>G, NR_001578.1:n.18C>T

Select item 147567765213.

rs1475677652 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 8:11364966 (GRCh38)
8:11222475 (GRCh37)
Canonical SPDI:: NC_000008.11:11364965:T:A
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.11364966T>A, NC_000008.10:g.11222475T>A, NW_018654717.1:g.1981885A>T, NM_152566.2:c.*163T>A, NM_152566.1:c.*163T>A, NR_001578.1:n.954T>A

Select item 147562630014.

rs1475626300 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 8:11365753 (GRCh38)
8:11223262 (GRCh37)
Canonical SPDI:: NC_000008.11:11365752:G:C,NC_000008.11:11365752:G:T
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.11365753G>C, NC_000008.11:g.11365753G>T, NC_000008.10:g.11223262G>C, NC_000008.10:g.11223262G>T, NW_018654717.1:g.1981098C>G, NW_018654717.1:g.1981098C>A, NM_152566.2:c.*357G>C, NM_152566.2:c.*357G>T, NM_152566.1:c.*357G>C, NM_152566.1:c.*357G>T, NR_001578.1:n.1148G>C, NR_001578.1:n.1148G>T

Select item 147479610915.

rs1474796109 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:11364766 (GRCh38)
8:11222275 (GRCh37)
Canonical SPDI:: NC_000008.11:11364765:C:T
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.11364766C>T, NC_000008.10:g.11222275C>T, NW_018654717.1:g.1982085G>A, NM_152566.2:c.656C>T, NM_152566.1:c.506C>T, NR_001578.1:n.754C>T

Select item 147385236516.

rs1473852365 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:11356156 (GRCh38)
8:11213665 (GRCh37)
Canonical SPDI:: NC_000008.11:11356155:A:C
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000108/2 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000029/4 (GnomAD)
C=0.000446/2 (Estonian)
HGVS:: NC_000008.11:g.11356156A>C, NC_000008.10:g.11213665A>C, NW_018654717.1:g.1990695T>G, NM_152566.2:c.37A>C, NM_152566.1:c.37A>C, NR_001578.1:n.135A>C

Select item 147180283217.

rs1471802832 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:11358156 (GRCh38)
8:11215665 (GRCh37)
Canonical SPDI:: NC_000008.11:11358155:G:A,NC_000008.11:11358155:G:C
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.11358156G>A, NC_000008.11:g.11358156G>C, NC_000008.10:g.11215665G>A, NC_000008.10:g.11215665G>C, NW_018654717.1:g.1988695C>T, NW_018654717.1:g.1988695C>G, NM_152566.2:c.193G>A, NM_152566.2:c.193G>C, NM_152566.1:c.193G>A, NM_152566.1:c.193G>C, NR_001578.1:n.291G>A, NR_001578.1:n.291G>C

Select item 146988986018.

rs1469889860 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 8:11364829 (GRCh38)
8:11222338 (GRCh37)
Canonical SPDI:: NC_000008.11:11364828:C:G,NC_000008.11:11364828:C:T
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000257/36 (GnomAD)
HGVS:: NC_000008.11:g.11364829C>G, NC_000008.11:g.11364829C>T, NC_000008.10:g.11222338C>G, NC_000008.10:g.11222338C>T, NW_018654717.1:g.1982022G>C, NW_018654717.1:g.1982022G>A, NM_152566.2:c.*26C>G, NM_152566.2:c.*26C>T, NM_152566.1:c.*26C>G, NM_152566.1:c.*26C>T, NR_001578.1:n.817C>G, NR_001578.1:n.817C>T

Select item 146586059819.

rs1465860598 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:11365785 (GRCh38)
8:11223294 (GRCh37)
Canonical SPDI:: NC_000008.11:11365784:C:T
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.11365785C>T, NC_000008.10:g.11223294C>T, NW_018654717.1:g.1981066G>A, NM_152566.2:c.*389C>T, NM_152566.1:c.*389C>T, NR_001578.1:n.1180C>T

Select item 146182850320.

rs1461828503 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:11364757 (GRCh38)
8:11222266 (GRCh37)
Canonical SPDI:: NC_000008.11:11364756:T:C
Gene:: TDH (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.11364757T>C, NC_000008.10:g.11222266T>C, NW_018654717.1:g.1982094A>G, NM_152566.2:c.647T>C, NM_152566.1:c.497T>C, NR_001578.1:n.745T>C