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Links from Nucleotide

Items: 1 to 20 of 29

1.

rs1488361040 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    C>T [Show Flanks]
    Chromosome:
    19:49933132 (GRCh38)
    19:50436389 (GRCh37)
    Canonical SPDI:
    NC_000019.10:49933131:C:T
    Gene:
    ATF5 (Varview), MIR4751 (Varview)
    Functional Consequence:
    non_coding_transcript_variant,3_prime_UTR_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    T=0./0 (ALFA)
    T=0.000004/1 (TOPMED)
    HGVS:
    2.

    rs1485623599 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      G>T [Show Flanks]
      Chromosome:
      19:49933118 (GRCh38)
      19:50436375 (GRCh37)
      Canonical SPDI:
      NC_000019.10:49933117:G:T
      Gene:
      ATF5 (Varview), MIR4751 (Varview)
      Functional Consequence:
      non_coding_transcript_variant,3_prime_UTR_variant
      Validated:
      by frequency
      MAF:
      T=0.000005/1 (GnomAD_exomes)
      HGVS:
      3.

      rs1452304021 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        C>T [Show Flanks]
        Chromosome:
        19:49933079 (GRCh38)
        19:50436336 (GRCh37)
        Canonical SPDI:
        NC_000019.10:49933078:C:T
        Gene:
        ATF5 (Varview), MIR4751 (Varview)
        Functional Consequence:
        non_coding_transcript_variant,coding_sequence_variant,missense_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        T=0./0 (ALFA)
        T=0.000004/1 (TOPMED)
        T=0.000007/1 (GnomAD)
        HGVS:
        4.

        rs1394038310 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          G>A [Show Flanks]
          Chromosome:
          19:49933076 (GRCh38)
          19:50436333 (GRCh37)
          Canonical SPDI:
          NC_000019.10:49933075:G:A
          Gene:
          ATF5 (Varview), MIR4751 (Varview)
          Functional Consequence:
          missense_variant,non_coding_transcript_variant,coding_sequence_variant
          Validated:
          by frequency
          MAF:
          A=0.000004/1 (GnomAD_exomes)
          HGVS:
          5.

          rs1365782687 [Homo sapiens]
            Variant type:
            DELINS
            Alleles:
            ->C [Show Flanks]
            Chromosome:
            19:49933097 (GRCh38)
            19:50436355 (GRCh37)
            Canonical SPDI:
            NC_000019.10:49933097:C:CC
            Gene:
            ATF5 (Varview), MIR4751 (Varview)
            Functional Consequence:
            non_coding_transcript_variant,3_prime_UTR_variant
            Validated:
            by frequency,by alfa
            MAF:
            CC=0./0 (ALFA)
            HGVS:
            6.

            rs1342521568 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              A>G [Show Flanks]
              Chromosome:
              19:49933094 (GRCh38)
              19:50436351 (GRCh37)
              Canonical SPDI:
              NC_000019.10:49933093:A:G
              Gene:
              ATF5 (Varview), MIR4751 (Varview)
              Functional Consequence:
              3_prime_UTR_variant,non_coding_transcript_variant
              Validated:
              by cluster
              HGVS:
              7.

              rs1311128204 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                T>A [Show Flanks]
                Chromosome:
                19:49933083 (GRCh38)
                19:50436340 (GRCh37)
                Canonical SPDI:
                NC_000019.10:49933082:T:A
                Gene:
                ATF5 (Varview), MIR4751 (Varview)
                Functional Consequence:
                non_coding_transcript_variant,synonymous_variant,coding_sequence_variant
                Validated:
                by frequency
                MAF:
                A=0.000004/1 (GnomAD_exomes)
                HGVS:
                8.
                9.
                10.

                rs1213552021 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>C [Show Flanks]
                  Chromosome:
                  19:49933101 (GRCh38)
                  19:50436358 (GRCh37)
                  Canonical SPDI:
                  NC_000019.10:49933100:G:C
                  Gene:
                  ATF5 (Varview), MIR4751 (Varview)
                  Functional Consequence:
                  non_coding_transcript_variant,3_prime_UTR_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  C=0./0 (ALFA)
                  C=0.000004/1 (TOPMED)
                  C=0.000005/1 (GnomAD_exomes)
                  C=0.000007/1 (GnomAD)
                  HGVS:
                  11.
                  12.

                  rs1029854759 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    T>G [Show Flanks]
                    Chromosome:
                    19:49933123 (GRCh38)
                    19:50436380 (GRCh37)
                    Canonical SPDI:
                    NC_000019.10:49933122:T:G
                    Gene:
                    ATF5 (Varview), MIR4751 (Varview)
                    Functional Consequence:
                    3_prime_UTR_variant,non_coding_transcript_variant
                    Validated:
                    by frequency,by cluster
                    MAF:
                    G=0.0033/6 (Korea1K)
                    T=0.5/1 (Siberian)
                    HGVS:
                    13.

                    rs968717917 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      C>T [Show Flanks]
                      Chromosome:
                      19:49933064 (GRCh38)
                      19:50436321 (GRCh37)
                      Canonical SPDI:
                      NC_000019.10:49933063:C:T
                      Gene:
                      ATF5 (Varview), MIR4751 (Varview)
                      Functional Consequence:
                      missense_variant,non_coding_transcript_variant,coding_sequence_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      T=0.000028/1 (ALFA)
                      T=0.000007/1 (GnomAD)
                      T=0.000008/2 (TOPMED)
                      HGVS:
                      14.

                      rs948910883 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        T>G [Show Flanks]
                        Chromosome:
                        19:49933104 (GRCh38)
                        19:50436361 (GRCh37)
                        Canonical SPDI:
                        NC_000019.10:49933103:T:G
                        Gene:
                        ATF5 (Varview), MIR4751 (Varview)
                        Functional Consequence:
                        3_prime_UTR_variant,non_coding_transcript_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        G=0.000071/1 (ALFA)
                        G=0.000005/1 (GnomAD_exomes)
                        G=0.000021/3 (GnomAD)
                        G=0.000023/6 (TOPMED)
                        G=0.003821/7 (Korea1K)
                        HGVS:
                        15.

                        rs944129873 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          A>T [Show Flanks]
                          Chromosome:
                          19:49933078 (GRCh38)
                          19:50436335 (GRCh37)
                          Canonical SPDI:
                          NC_000019.10:49933077:A:T
                          Gene:
                          ATF5 (Varview), MIR4751 (Varview)
                          Functional Consequence:
                          coding_sequence_variant,missense_variant,non_coding_transcript_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          T=0./0 (ALFA)
                          T=0.000004/1 (GnomAD_exomes)
                          T=0.000007/1 (GnomAD)
                          HGVS:
                          16.

                          rs928610536 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            G>C [Show Flanks]
                            Chromosome:
                            19:49933135 (GRCh38)
                            19:50436392 (GRCh37)
                            Canonical SPDI:
                            NC_000019.10:49933134:G:C
                            Gene:
                            ATF5 (Varview), MIR4751 (Varview)
                            Functional Consequence:
                            non_coding_transcript_variant,3_prime_UTR_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            C=0./0 (ALFA)
                            C=0.000008/2 (TOPMED)
                            HGVS:
                            17.

                            rs779755053 [Homo sapiens]
                              Variant type:
                              DELINS
                              Alleles:
                              TG>- [Show Flanks]
                              Chromosome:
                              19:49933106 (GRCh38)
                              19:50436363 (GRCh37)
                              Canonical SPDI:
                              NC_000019.10:49933102:GTGTG:GTG
                              Gene:
                              ATF5 (Varview), MIR4751 (Varview)
                              Functional Consequence:
                              3_prime_UTR_variant,non_coding_transcript_variant
                              Validated:
                              by frequency,by alfa,by cluster
                              MAF:
                              GTG=0./0 (ALFA)
                              -=0.000007/1 (GnomAD)
                              -=0.00001/1 (ExAC)
                              -=0.000019/4 (GnomAD_exomes)
                              -=0.000023/6 (TOPMED)
                              -=0.000259/1 (ALSPAC)
                              -=0.00027/1 (TWINSUK)
                              HGVS:
                              18.

                              rs778348707 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                G>A [Show Flanks]
                                Chromosome:
                                19:49933108 (GRCh38)
                                19:50436365 (GRCh37)
                                Canonical SPDI:
                                NC_000019.10:49933107:G:A
                                Gene:
                                ATF5 (Varview), MIR4751 (Varview)
                                Functional Consequence:
                                3_prime_UTR_variant,non_coding_transcript_variant
                                Validated:
                                by frequency,by cluster
                                MAF:
                                A=0.00002/2 (ExAC)
                                HGVS:
                                20.

                                rs771658237 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  C>A [Show Flanks]
                                  Chromosome:
                                  19:49933124 (GRCh38)
                                  19:50436381 (GRCh37)
                                  Canonical SPDI:
                                  NC_000019.10:49933123:C:A
                                  Gene:
                                  ATF5 (Varview), MIR4751 (Varview)
                                  Functional Consequence:
                                  3_prime_UTR_variant,non_coding_transcript_variant
                                  Validated:
                                  by frequency
                                  MAF:
                                  A=0./0 (ExAC)
                                  HGVS:

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