SNP Links for Nucleotide (Select 335057560) - SNP

Links from Nucleotide

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Select item 14878206421.

rs1487820642 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:65296051 (GRCh38)
15:65588389 (GRCh37)
Canonical SPDI:: NC_000015.10:65296050:A:G
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000285/4 (ALFA)
G=0.000029/4 (GnomAD)
G=0.000049/13 (TOPMED)
G=0.000283/5 (TOMMO)
G=0.000684/2 (KOREAN)
HGVS:: NC_000015.10:g.65296051A>G, NC_000015.9:g.65588389A>G, NR_002756.2:n.1A>G

Select item 14767481062.

rs1476748106 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 15:65296055 (GRCh38)
15:65588393 (GRCh37)
Canonical SPDI:: NC_000015.10:65296054:T:C,NC_000015.10:65296054:T:G
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.65296055T>C, NC_000015.10:g.65296055T>G, NC_000015.9:g.65588393T>C, NC_000015.9:g.65588393T>G, NR_002756.2:n.5T>C, NR_002756.2:n.5T>G

Select item 14383378333.

rs1438337833 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: 15:65296160 (GRCh38)
15:65588499 (GRCh37)
Canonical SPDI:: NC_000015.10:65296160::T
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000021/3 (GnomAD)
T=0.000071/1 (TOMMO)
T=0.000546/1 (Korea1K)
HGVS:: NC_000015.10:g.65296160_65296161insT, NC_000015.9:g.65588498_65588499insT, NR_002756.2:n.110_111insT

Select item 14318340684.

rs1431834068 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:65296111 (GRCh38)
15:65588449 (GRCh37)
Canonical SPDI:: NC_000015.10:65296110:A:G
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.65296111A>G, NC_000015.9:g.65588449A>G, NR_002756.2:n.61A>G

Select item 14265169375.

rs1426516937 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 15:65296134 (GRCh38)
15:65588472 (GRCh37)
Canonical SPDI:: NC_000015.10:65296133:CCC:CC
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.65296136del, NC_000015.9:g.65588474del, NR_002756.2:n.86del

Select item 14213300386.

rs1421330038 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 15:65296119 (GRCh38)
15:65588457 (GRCh37)
Canonical SPDI:: NC_000015.10:65296118:A:C,NC_000015.10:65296118:A:G,NC_000015.10:65296118:A:T
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.65296119A>C, NC_000015.10:g.65296119A>G, NC_000015.10:g.65296119A>T, NC_000015.9:g.65588457A>C, NC_000015.9:g.65588457A>G, NC_000015.9:g.65588457A>T, NR_002756.2:n.69A>C, NR_002756.2:n.69A>G, NR_002756.2:n.69A>T

Select item 14211094887.

rs1421109488 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 15:65296101 (GRCh38)
15:65588439 (GRCh37)
Canonical SPDI:: NC_000015.10:65296100:A:
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000015.10:g.65296101del, NC_000015.9:g.65588439del, NR_002756.2:n.51del

Select item 14095940538.

rs1409594053 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACT>- [Show Flanks]
Chromosome:: 15:65296053 (GRCh38)
15:65588391 (GRCh37)
Canonical SPDI:: NC_000015.10:65296051:TACT:T
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.65296053_65296055del, NC_000015.9:g.65588391_65588393del, NR_002756.2:n.3_5del

Select item 14088162659.

rs1408816265 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 15:65296060 (GRCh38)
15:65588398 (GRCh37)
Canonical SPDI:: NC_000015.10:65296059:TTT:TT
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.65296062del, NC_000015.9:g.65588400del, NR_002756.2:n.12del

Select item 139946311310.

rs1399463113 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA [Show Flanks]
Chromosome:: 15:65296078 (GRCh38)
15:65588416 (GRCh37)
Canonical SPDI:: NC_000015.10:65296077:AAA:AA,NC_000015.10:65296077:AAA:AAAA
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: AAAA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.65296080del, NC_000015.10:g.65296080dup, NC_000015.9:g.65588418del, NC_000015.9:g.65588418dup, NR_002756.2:n.30del, NR_002756.2:n.30dup

Select item 138576086011.

rs1385760860 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ACCCAAT [Show Flanks]
Chromosome:: 15:65296132 (GRCh38)
15:65588471 (GRCh37)
Canonical SPDI:: NC_000015.10:65296132:ACCCAAT:ACCCAATACCCAAT
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACCCAATACCCAAT=0.000071/1 (ALFA)
ACCCAAT=0.000011/3 (TOPMED)
ACCCAAT=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.65296133_65296139dup, NC_000015.9:g.65588471_65588477dup, NR_002756.2:n.83_89dup

Select item 138404492812.

rs1384044928 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 15:65296135 (GRCh38)
15:65588473 (GRCh37)
Canonical SPDI:: NC_000015.10:65296134:C:A,NC_000015.10:65296134:C:G,NC_000015.10:65296134:C:T
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000015.10:g.65296135C>A, NC_000015.10:g.65296135C>G, NC_000015.10:g.65296135C>T, NC_000015.9:g.65588473C>A, NC_000015.9:g.65588473C>G, NC_000015.9:g.65588473C>T, NR_002756.2:n.85C>A, NR_002756.2:n.85C>G, NR_002756.2:n.85C>T

Select item 137839827913.

rs1378398279 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G,GG [Show Flanks]
Chromosome:: 15:65296157 (GRCh38)
15:65588496 (GRCh37)
Canonical SPDI:: NC_000015.10:65296157:GG:GGG,NC_000015.10:65296157:GG:GGGG
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGG=0./0 (ALFA)
GG=0.000004/1 (TOPMED)
GG=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.65296159dup, NC_000015.10:g.65296158_65296159dup, NC_000015.9:g.65588497dup, NC_000015.9:g.65588496_65588497dup, NR_002756.2:n.109dup, NR_002756.2:n.108_109dup

Select item 137326113414.

rs1373261134 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 15:65296138 (GRCh38)
15:65588477 (GRCh37)
Canonical SPDI:: NC_000015.10:65296138:TTTTTT:TTTTTTT
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000015.10:g.65296144dup, NC_000015.9:g.65588482dup, NR_002756.2:n.94dup

Select item 135972741215.

rs1359727412 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 15:65296099 (GRCh38)
15:65588437 (GRCh37)
Canonical SPDI:: NC_000015.10:65296098:A:C,NC_000015.10:65296098:A:G
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.65296099A>C, NC_000015.10:g.65296099A>G, NC_000015.9:g.65588437A>C, NC_000015.9:g.65588437A>G, NR_002756.2:n.49A>C, NR_002756.2:n.49A>G

Select item 134597520816.

rs1345975208 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 15:65296069 (GRCh38)
15:65588407 (GRCh37)
Canonical SPDI:: NC_000015.10:65296068:A:C,NC_000015.10:65296068:A:G,NC_000015.10:65296068:A:T
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000035/1 (TOMMO)
C=0.000223/1 (Estonian)
HGVS:: NC_000015.10:g.65296069A>C, NC_000015.10:g.65296069A>G, NC_000015.10:g.65296069A>T, NC_000015.9:g.65588407A>C, NC_000015.9:g.65588407A>G, NC_000015.9:g.65588407A>T, NR_002756.2:n.19A>C, NR_002756.2:n.19A>G, NR_002756.2:n.19A>T

Select item 134486337317.

rs1344863373 [Homo sapiens]

Variant type:: INS
Alleles:: ->A [Show Flanks]
Chromosome:: 15:65296058 (GRCh38)
15:65588397 (GRCh37)
Canonical SPDI:: NC_000015.10:65296058::A
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.65296058_65296059insA, NC_000015.9:g.65588396_65588397insA, NR_002756.2:n.8_9insA

Select item 133895285818.

rs1338952858 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:65296146 (GRCh38)
15:65588484 (GRCh37)
Canonical SPDI:: NC_000015.10:65296145:A:G
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.65296146A>G, NC_000015.9:g.65588484A>G, NR_002756.2:n.96A>G

Select item 133861004319.

rs1338610043 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 15:65296077 (GRCh38)
15:65588415 (GRCh37)
Canonical SPDI:: NC_000015.10:65296076:T:A,NC_000015.10:65296076:T:C,NC_000015.10:65296076:T:G
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00004/1 (TOMMO)
HGVS:: NC_000015.10:g.65296077T>A, NC_000015.10:g.65296077T>C, NC_000015.10:g.65296077T>G, NC_000015.9:g.65588415T>A, NC_000015.9:g.65588415T>C, NC_000015.9:g.65588415T>G, NR_002756.2:n.27T>A, NR_002756.2:n.27T>C, NR_002756.2:n.27T>G

Select item 132996596220.

rs1329965962 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 15:65296151 (GRCh38)
15:65588489 (GRCh37)
Canonical SPDI:: NC_000015.10:65296150:T:G
Gene:: RNU5A-1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.65296151T>G, NC_000015.9:g.65588489T>G, NR_002756.2:n.101T>G

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