SNP Links for Nucleotide (Select 30911113) - SNP

Links from Nucleotide

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Select item 14912654071.

rs1491265407 [Homo sapiens]

Variant type:: DEL
Alleles:: AG>- [Show Flanks]
Chromosome:: 17:18423869 (GRCh38)
17:18327183 (GRCh37)
Canonical SPDI:: NC_000017.11:18423868:AG:
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000017.11:g.18423869_18423870del, NC_000017.10:g.18327183_18327184del, NW_017363819.1:g.193848_193849del, NR_001443.1:n.1689_1690del

Select item 14911638022.

rs1491163802 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 17:18423869 (GRCh38)
17:18327184 (GRCh37)
Canonical SPDI:: NC_000017.11:18423869:GGGGG:GGGGGG
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: GGGGGG=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.18423874dup, NC_000017.10:g.18327188dup, NW_017363819.1:g.193853dup, NR_001443.1:n.1694dup

Select item 14903390493.

rs1490339049 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 17:18423923 (GRCh38)
17:18327237 (GRCh37)
Canonical SPDI:: NC_000017.11:18423922:T:G
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00009/1 (ALFA)
G=0.00125/18 (TOMMO)
G=0.01188/14 (Korea1K)
G=0.05389/144 (KOREAN)
T=0.46154/12 (SGDP_PRJ)
HGVS:: NC_000017.11:g.18423923T>G, NC_000017.10:g.18327237T>G, NW_017363819.1:g.193902T>G, NR_001443.1:n.1743T>G

Select item 14903245694.

rs1490324569 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:18423231 (GRCh38)
17:18326545 (GRCh37)
Canonical SPDI:: NC_000017.11:18423230:A:G
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000017.11:g.18423231A>G, NC_000017.10:g.18326545A>G, NW_017363819.1:g.193210A>G, NR_001443.1:n.1051A>G

Select item 14901724675.

rs1490172467 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 17:18422235 (GRCh38)
17:18325549 (GRCh37)
Canonical SPDI:: NC_000017.11:18422234:A:T
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.18422235A>T, NC_000017.10:g.18325549A>T, NW_017363819.1:g.192214A>T, NR_001443.1:n.55A>T

Select item 14889506386.

rs1488950638 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:18425185 (GRCh38)
17:18328499 (GRCh37)
Canonical SPDI:: NC_000017.11:18425184:T:C
Gene:: KRT17P5 (Varview), KRT17P2 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.18425185T>C, NC_000017.10:g.18328499T>C, NW_017363819.1:g.195164T>C, NR_001443.1:n.3005T>C

Select item 14887822837.

rs1488782283 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:18423606 (GRCh38)
17:18326920 (GRCh37)
Canonical SPDI:: NC_000017.11:18423605:G:A
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000017/2 (GnomAD)
HGVS:: NC_000017.11:g.18423606G>A, NC_000017.10:g.18326920G>A, NW_017363819.1:g.193585G>A, NR_001443.1:n.1426G>A

Select item 14884881828.

rs1488488182 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 17:18424216 (GRCh38)
17:18327530 (GRCh37)
Canonical SPDI:: NC_000017.11:18424215:C:A,NC_000017.11:18424215:C:T
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.18424216C>A, NC_000017.11:g.18424216C>T, NC_000017.10:g.18327530C>A, NC_000017.10:g.18327530C>T, NW_017363819.1:g.194195C>A, NW_017363819.1:g.194195C>T, NR_001443.1:n.2036C>A, NR_001443.1:n.2036C>T

Select item 14876399289.

rs1487639928 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:18422878 (GRCh38)
17:18326192 (GRCh37)
Canonical SPDI:: NC_000017.11:18422877:A:G
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.18422878A>G, NC_000017.10:g.18326192A>G, NW_017363819.1:g.192857A>G, NR_001443.1:n.698A>G

Select item 148730069310.

rs1487300693 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 17:18424612 (GRCh38)
17:18327926 (GRCh37)
Canonical SPDI:: NC_000017.11:18424611:C:G
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000169/2 (ALFA)
G=0.000049/13 (TOPMED)
HGVS:: NC_000017.11:g.18424612C>G, NC_000017.10:g.18327926C>G, NW_017363819.1:g.194591C>G, NR_001443.1:n.2432C>G

Select item 148691436711.

rs1486914367 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:18425121 (GRCh38)
17:18328435 (GRCh37)
Canonical SPDI:: NC_000017.11:18425120:C:A
Gene:: KRT17P5 (Varview), KRT17P2 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.18425121C>A, NC_000017.10:g.18328435C>A, NW_017363819.1:g.195100C>A, NR_001443.1:n.2941C>A

Select item 148683751512.

rs1486837515 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 17:18424926 (GRCh38)
17:18328240 (GRCh37)
Canonical SPDI:: NC_000017.11:18424925:T:A,NC_000017.11:18424925:T:C,NC_000017.11:18424925:T:G
Gene:: KRT17P5 (Varview), KRT17P2 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000008/2 (TOPMED)
G=0.000132/18 (GnomAD)
G=0.010609/31 (KOREAN)
T=0.5/4 (SGDP_PRJ)
HGVS:: NC_000017.11:g.18424926T>A, NC_000017.11:g.18424926T>C, NC_000017.11:g.18424926T>G, NC_000017.10:g.18328240T>A, NC_000017.10:g.18328240T>C, NC_000017.10:g.18328240T>G, NW_017363819.1:g.194905T>A, NW_017363819.1:g.194905T>C, NW_017363819.1:g.194905T>G, NR_001443.1:n.2746T>A, NR_001443.1:n.2746T>C, NR_001443.1:n.2746T>G

Select item 148680488313.

rs1486804883 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:18423488 (GRCh38)
17:18326802 (GRCh37)
Canonical SPDI:: NC_000017.11:18423487:A:G
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00017/2 (ALFA)
G=0.00047/3 (1000Genomes)
HGVS:: NC_000017.11:g.18423488A>G, NC_000017.10:g.18326802A>G, NW_017363819.1:g.193467A>G, NR_001443.1:n.1308A>G

Select item 148594992214.

rs1485949922 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 17:18424764 (GRCh38)
17:18328078 (GRCh37)
Canonical SPDI:: NC_000017.11:18424763:CCC:CC
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0.000198/3 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.18424766del, NC_000017.10:g.18328080del, NW_017363819.1:g.194745del, NR_001443.1:n.2586del

Select item 148571421115.

rs1485714211 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:18423287 (GRCh38)
17:18326601 (GRCh37)
Canonical SPDI:: NC_000017.11:18423286:C:T
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00031/2 (1000Genomes)
T=0.00069/2 (KOREAN)
HGVS:: NC_000017.11:g.18423287C>T, NC_000017.10:g.18326601C>T, NW_017363819.1:g.193266C>T, NR_001443.1:n.1107C>T

Select item 148562185416.

rs1485621854 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:18424141 (GRCh38)
17:18327455 (GRCh37)
Canonical SPDI:: NC_000017.11:18424140:G:A
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.002388/39 (ALFA)
A=0.001203/164 (GnomAD)
G=0.5/2 (SGDP_PRJ)
HGVS:: NC_000017.11:g.18424141G>A, NC_000017.10:g.18327455G>A, NW_017363819.1:g.194120G>A, NR_001443.1:n.1961G>A

Select item 148487988517.

rs1484879885 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 17:18423719 (GRCh38)
17:18327033 (GRCh37)
Canonical SPDI:: NC_000017.11:18423718:G:A,NC_000017.11:18423718:G:C
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00008/1 (ALFA)
A=0.00035/1 (KOREAN)
A=0.00281/18 (1000Genomes)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000017.11:g.18423719G>A, NC_000017.11:g.18423719G>C, NC_000017.10:g.18327033G>A, NC_000017.10:g.18327033G>C, NW_017363819.1:g.193698G>A, NW_017363819.1:g.193698G>C, NR_001443.1:n.1539G>A, NR_001443.1:n.1539G>C

Select item 148482083218.

rs1484820832 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 17:18422340 (GRCh38)
17:18325654 (GRCh37)
Canonical SPDI:: NC_000017.11:18422339:G:A,NC_000017.11:18422339:G:T
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00024/5 (ALFA)
A=0.000058/8 (GnomAD)
T=0.001026/17 (TOMMO)
T=0.001369/4 (KOREAN)
T=0.003275/6 (Korea1K)
HGVS:: NC_000017.11:g.18422340G>A, NC_000017.11:g.18422340G>T, NC_000017.10:g.18325654G>A, NC_000017.10:g.18325654G>T, NW_017363819.1:g.192319G>A, NW_017363819.1:g.192319G>T, NR_001443.1:n.160G>A, NR_001443.1:n.160G>T

Select item 148440701619.

rs1484407016 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 17:18423800 (GRCh38)
17:18327114 (GRCh37)
Canonical SPDI:: NC_000017.11:18423799:G:A,NC_000017.11:18423799:G:C
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000022/3 (GnomAD)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000017.11:g.18423800G>A, NC_000017.11:g.18423800G>C, NC_000017.10:g.18327114G>A, NC_000017.10:g.18327114G>C, NW_017363819.1:g.193779G>A, NW_017363819.1:g.193779G>C, NR_001443.1:n.1620G>A, NR_001443.1:n.1620G>C

Select item 148401685020.

rs1484016850 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 17:18424140 (GRCh38)
17:18327455 (GRCh37)
Canonical SPDI:: NC_000017.11:18424140:GG:GGG
Gene:: KRT17P5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: GGG=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.18424142dup, NC_000017.10:g.18327456dup, NW_017363819.1:g.194121dup, NR_001443.1:n.1962dup

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