SNP Links for Nucleotide (Select 302699230) - SNP

Links from Nucleotide

Items: 1 to 20 of 767

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Select item 14900996901.

rs1490099690 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 10:22436269 (GRCh38)
10:22725198 (GRCh37)
Canonical SPDI:: NC_000010.11:22436268:T:A,NC_000010.11:22436268:T:C
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000010.11:g.22436269T>A, NC_000010.11:g.22436269T>C, NC_000010.10:g.22725198T>A, NC_000010.10:g.22725198T>C, NR_036533.1:n.1661A>T, NR_036533.1:n.1661A>G

Select item 14900756042.

rs1490075604 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 10:22436456 (GRCh38)
10:22725385 (GRCh37)
Canonical SPDI:: NC_000010.11:22436455:CC:C
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.22436457del, NC_000010.10:g.22725386del, NR_036533.1:n.1474del

Select item 14899114043.

rs1489911404 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 10:22436788 (GRCh38)
10:22725717 (GRCh37)
Canonical SPDI:: NC_000010.11:22436787:G:T
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000010.11:g.22436788G>T, NC_000010.10:g.22725717G>T, NR_036533.1:n.1142C>A

Select item 14880131964.

rs1488013196 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:22437661 (GRCh38)
10:22726590 (GRCh37)
Canonical SPDI:: NC_000010.11:22437660:C:T
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000010.11:g.22437661C>T, NC_000010.10:g.22726590C>T, NR_036533.1:n.269G>A

Select item 14864352945.

rs1486435294 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 10:22437405 (GRCh38)
10:22726334 (GRCh37)
Canonical SPDI:: NC_000010.11:22437404:T:G
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.22437405T>G, NC_000010.10:g.22726334T>G, NR_036533.1:n.525A>C

Select item 14862230086.

rs1486223008 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 10:22437252 (GRCh38)
10:22726181 (GRCh37)
Canonical SPDI:: NC_000010.11:22437251:G:A,NC_000010.11:22437251:G:T
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.00004/1 (TOMMO)
HGVS:: NC_000010.11:g.22437252G>A, NC_000010.11:g.22437252G>T, NC_000010.10:g.22726181G>A, NC_000010.10:g.22726181G>T, NR_036533.1:n.678C>T, NR_036533.1:n.678C>A

Select item 14860911117.

rs1486091111 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:22436331 (GRCh38)
10:22725260 (GRCh37)
Canonical SPDI:: NC_000010.11:22436330:C:T
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.22436331C>T, NC_000010.10:g.22725260C>T, NR_036533.1:n.1599G>A

Select item 14840763938.

rs1484076393 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:22436240 (GRCh38)
10:22725169 (GRCh37)
Canonical SPDI:: NC_000010.11:22436239:T:C
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.22436240T>C, NC_000010.10:g.22725169T>C, NR_036533.1:n.1690A>G

Select item 14834531219.

rs1483453121 [Homo sapiens]

Variant type:: DELINS
Alleles:: GGA>- [Show Flanks]
Chromosome:: 10:22436698 (GRCh38)
10:22725627 (GRCh37)
Canonical SPDI:: NC_000010.11:22436696:AGGA:A
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
-=0.000038/10 (TOPMED)
-=0.00005/7 (GnomAD)
HGVS:: NC_000010.11:g.22436698_22436700del, NC_000010.10:g.22725627_22725629del, NR_036533.1:n.1231_1233del

Select item 148163743510.

rs1481637435 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:22436104 (GRCh38)
10:22725033 (GRCh37)
Canonical SPDI:: NC_000010.11:22436103:T:C
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.22436104T>C, NC_000010.10:g.22725033T>C, NR_036533.1:n.1826A>G

Select item 147982340211.

rs1479823402 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 10:22436108 (GRCh38)
10:22725037 (GRCh37)
Canonical SPDI:: NC_000010.11:22436107:C:G
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: G=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.22436108C>G, NC_000010.10:g.22725037C>G, NR_036533.1:n.1822G>C

Select item 147949688312.

rs1479496883 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 10:22436902 (GRCh38)
10:22725831 (GRCh37)
Canonical SPDI:: NC_000010.11:22436901:A:T
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000016/2 (GnomAD)
T=0.000312/2 (1000Genomes)
HGVS:: NC_000010.11:g.22436902A>T, NC_000010.10:g.22725831A>T, NR_036533.1:n.1028T>A

Select item 147765520513.

rs1477655205 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 10:22437724 (GRCh38)
10:22726653 (GRCh37)
Canonical SPDI:: NC_000010.11:22437723:C:G
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.22437724C>G, NC_000010.10:g.22726653C>G, NR_036533.1:n.206G>C

Select item 147763301814.

rs1477633018 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:22437410 (GRCh38)
10:22726339 (GRCh37)
Canonical SPDI:: NC_000010.11:22437409:C:T
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000054/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000223/1 (Estonian)
C=0.5/1 (SGDP_PRJ)
HGVS:: NC_000010.11:g.22437410C>T, NC_000010.10:g.22726339C>T, NR_036533.1:n.520G>A

Select item 147719374415.

rs1477193744 [Homo sapiens]

Variant type:: DELINS
Alleles:: GGGGC>- [Show Flanks]
Chromosome:: 10:22437156 (GRCh38)
10:22726085 (GRCh37)
Canonical SPDI:: NC_000010.11:22437153:GCGGGGC:GC
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: GC=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.22437156_22437160del, NC_000010.10:g.22726085_22726089del, NR_036533.1:n.772_776del

Select item 147708396416.

rs1477083964 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:22437819 (GRCh38)
10:22726748 (GRCh37)
Canonical SPDI:: NC_000010.11:22437818:C:T
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.22437819C>T, NC_000010.10:g.22726748C>T, NR_036533.1:n.111G>A

Select item 147563112517.

rs1475631125 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 10:22437654 (GRCh38)
10:22726583 (GRCh37)
Canonical SPDI:: NC_000010.11:22437653:T:
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.22437654del, NC_000010.10:g.22726583del, NR_036533.1:n.276del

Select item 147354822518.

rs1473548225 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 10:22437208 (GRCh38)
10:22726137 (GRCh37)
Canonical SPDI:: NC_000010.11:22437207:C:G
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.22437208C>G, NC_000010.10:g.22726137C>G, NR_036533.1:n.722G>C

Select item 147148077019.

rs1471480770 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:22437645 (GRCh38)
10:22726574 (GRCh37)
Canonical SPDI:: NC_000010.11:22437644:C:T
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000019/5 (TOPMED)
HGVS:: NC_000010.11:g.22437645C>T, NC_000010.10:g.22726574C>T, NR_036533.1:n.285G>A

Select item 147028061720.

rs1470280617 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 10:22435833 (GRCh38)
10:22724762 (GRCh37)
Canonical SPDI:: NC_000010.11:22435832:G:C,NC_000010.11:22435832:G:T
Gene:: LINC03027 (Varview), LOC105376449 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000010.11:g.22435833G>C, NC_000010.11:g.22435833G>T, NC_000010.10:g.22724762G>C, NC_000010.10:g.22724762G>T, NR_036533.1:n.2097C>G, NR_036533.1:n.2097C>A

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